RNA–Protein interactions for RNA: ENST00000565990.2

SF3B3-206, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 967 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-206ENST00000565990 SLC10A1Q14973 349 aa11.45□□□□□ -0.58
SF3B3-206ENST00000565990 KRTCAP3Q53RY4 240 aa11.45□□□□□ -0.58
SF3B3-206ENST00000565990 COMTD1Q86VU5 262 aa11.45□□□□□ -0.58
SF3B3-206ENST00000565990 ZNF440Q8IYI8 595 aa11.45□□□□□ -0.58
SF3B3-206ENST00000565990 FAM109AQ8N4B1 249 aa11.45□□□□□ -0.58
SF3B3-206ENST00000565990 ZNF614Q8N883 585 aa11.45□□□□□ -0.58
SF3B3-206ENST00000565990 FAR1Q8WVX9 515 aa11.45□□□□□ -0.58
SF3B3-206ENST00000565990 FIG4Q92562 907 aa11.45□□□□□ -0.58
SF3B3-206ENST00000565990 FAM162AQ96A26 154 aa11.45□□□□□ -0.58
SF3B3-206ENST00000565990 ZNF524Q96C55 264 aa11.45□□□□□ -0.58
SF3B3-206ENST00000565990 JSRP1Q96MG2 331 aaPredicted RBP11.45□□□□□ -0.58
SF3B3-206ENST00000565990 COG8Q96MW5 612 aa11.45□□□□□ -0.58
SF3B3-206ENST00000565990 SEPHS2Q99611 448 aa11.45□□□□□ -0.58
SF3B3-206ENST00000565990 ARHGDIGQ99819 225 aa11.45□□□□□ -0.58
SF3B3-206ENST00000565990 KLHDC3Q9BQ90 382 aa11.45□□□□□ -0.58
SF3B3-206ENST00000565990 OR2B2Q9GZK3 357 aa11.45□□□□□ -0.58
SF3B3-206ENST00000565990 CCNB1IP1Q9NPC3 277 aa11.45□□□□□ -0.58
SF3B3-206ENST00000565990 PLSCR2Q9NRY7 297 aa11.45□□□□□ -0.58
SF3B3-206ENST00000565990 FAM118AQ9NWS6 357 aa11.45□□□□□ -0.58
SF3B3-206ENST00000565990 B4GALT7Q9UBV7 327 aa11.45□□□□□ -0.58
SF3B3-206ENST00000565990 CHD6Q8TD26 2715 aa11.44□□□□□ -0.58
SF3B3-206ENST00000565990 A0A087WZY1 265 aa11.44□□□□□ -0.58
SF3B3-206ENST00000565990 ACOT7O00154 380 aa11.44□□□□□ -0.58
SF3B3-206ENST00000565990 NTN1O95631 604 aa11.44□□□□□ -0.58
SF3B3-206ENST00000565990 RFC3P40938 356 aa11.44□□□□□ -0.58
SF3B3-206ENST00000565990 MAGEA5P43359 124 aa11.44□□□□□ -0.58
SF3B3-206ENST00000565990 SLC6A8P48029 635 aa11.44□□□□□ -0.58
SF3B3-206ENST00000565990 RNF144AP50876 292 aaPredicted RBP11.44□□□□□ -0.58
SF3B3-206ENST00000565990 ARHGDIAP52565 204 aa11.44□□□□□ -0.58
SF3B3-206ENST00000565990 ZNF136P52737 540 aa11.44□□□□□ -0.58
SF3B3-206ENST00000565990 CDH15P55291 814 aa11.44□□□□□ -0.58
SF3B3-206ENST00000565990 ALDH6A1Q02252 535 aaKnown RBP11.44□□□□□ -0.58
SF3B3-206ENST00000565990 PLGLB1Q02325 96 aa11.44□□□□□ -0.58
SF3B3-206ENST00000565990 PMS2P3Q13401 168 aa11.44□□□□□ -0.58
SF3B3-206ENST00000565990 CBFBQ13951 182 aa11.44□□□□□ -0.58
SF3B3-206ENST00000565990 NDUFAF6Q330K2 333 aa11.44□□□□□ -0.58
SF3B3-206ENST00000565990 EIPR1Q53HC9 387 aa11.44□□□□□ -0.58
SF3B3-206ENST00000565990 SLC25A53Q5H9E4 307 aa11.44□□□□□ -0.58
SF3B3-206ENST00000565990 C6orf141Q5SZD1 244 aa11.44□□□□□ -0.58
SF3B3-206ENST00000565990 SHQ1Q6PI26 577 aaKnown RBP11.44□□□□□ -0.58
SF3B3-206ENST00000565990 ZNF550Q7Z398 422 aa11.44□□□□□ -0.58
SF3B3-206ENST00000565990 STK32CQ86UX6 486 aa11.44□□□□□ -0.58
SF3B3-206ENST00000565990 SMYD1Q8NB12 490 aa11.44□□□□□ -0.58
SF3B3-206ENST00000565990 TRUB1Q8WWH5 349 aaKnown RBP11.44□□□□□ -0.58
SF3B3-206ENST00000565990 PYURFQ96I23 114 aa11.44□□□□□ -0.58
SF3B3-206ENST00000565990 SLX1AQ9BQ83 275 aa11.44□□□□□ -0.58
SF3B3-206ENST00000565990 WFDC6Q9BQY6 131 aa11.44□□□□□ -0.58
SF3B3-206ENST00000565990 CACYBPQ9HB71 228 aaKnown RBP11.44□□□□□ -0.58
SF3B3-206ENST00000565990 BAG5Q9UL15 447 aa11.44□□□□□ -0.58
SF3B3-206ENST00000565990 SNX5Q9Y5X3 404 aa11.44□□□□□ -0.58
SF3B3-206ENST00000565990 DNAJC13O75165 2243 aa11.44□□□□□ -0.58
SF3B3-206ENST00000565990 ZNF407Q9C0G0 2248 aa11.44□□□□□ -0.58
SF3B3-206ENST00000565990 SHANK1Q9Y566 2161 aa11.44□□□□□ -0.58
SF3B3-206ENST00000565990 SPENQ96T58 3664 aaKnown RBP11.43□□□□□ -0.58
SF3B3-206ENST00000565990 CFAP46Q8IYW2 2715 aa11.43□□□□□ -0.58
SF3B3-206ENST00000565990 TNFSF12-TNFSF13A0A0A6YY99 330 aa11.43□□□□□ -0.58
SF3B3-206ENST00000565990 TTLL8A6PVC2 850 aa11.43□□□□□ -0.58
SF3B3-206ENST00000565990 FAM166BA8MTA8 275 aa11.43□□□□□ -0.58
SF3B3-206ENST00000565990 GNGT2O14610 69 aa11.43□□□□□ -0.58
SF3B3-206ENST00000565990 SUSD5O60279 629 aa11.43□□□□□ -0.58
SF3B3-206ENST00000565990 TPST2O60704 377 aa11.43□□□□□ -0.58
SF3B3-206ENST00000565990 SERPINA1P01009 418 aa11.43□□□□□ -0.58
SF3B3-206ENST00000565990 OPN1SWP03999 348 aa11.43□□□□□ -0.58
SF3B3-206ENST00000565990 CELA3AP09093 270 aa11.43□□□□□ -0.58
SF3B3-206ENST00000565990 ZNF24P17028 368 aa11.43□□□□□ -0.58
SF3B3-206ENST00000565990 PGCP20142 388 aa11.43□□□□□ -0.58
SF3B3-206ENST00000565990 DPP4P27487 766 aa11.43□□□□□ -0.58
SF3B3-206ENST00000565990 ADH6P28332 368 aa11.43□□□□□ -0.58
SF3B3-206ENST00000565990 TDGF1P3P51864 188 aa11.43□□□□□ -0.58
SF3B3-206ENST00000565990 B3GALT5-AS1P59052 145 aa11.43□□□□□ -0.58
SF3B3-206ENST00000565990 TEKQ02763 1124 aa11.43□□□□□ -0.58
SF3B3-206ENST00000565990 ZNF691Q5VV52 312 aa11.43□□□□□ -0.58
SF3B3-206ENST00000565990 FAM180AQ6UWF9 173 aa11.43□□□□□ -0.58
SF3B3-206ENST00000565990 ARSKQ6UWY0 536 aa11.43□□□□□ -0.58
SF3B3-206ENST00000565990 Q6ZNX1 250 aa11.43□□□□□ -0.58
SF3B3-206ENST00000565990 PIWIL3Q7Z3Z3 882 aaKnown RBP11.43□□□□□ -0.58
SF3B3-206ENST00000565990 LSMEM1Q8N8F7 131 aa11.43□□□□□ -0.58
SF3B3-206ENST00000565990 PIK3C3Q8NEB9 887 aa11.43□□□□□ -0.58
SF3B3-206ENST00000565990 FAM83FQ8NEG4 500 aaPredicted RBP11.43□□□□□ -0.58
SF3B3-206ENST00000565990 OR4K17Q8NGC6 315 aa11.43□□□□□ -0.58
SF3B3-206ENST00000565990 NR4A3Q92570 626 aa11.43□□□□□ -0.58
SF3B3-206ENST00000565990 ZBTB8AQ96BR9 441 aa11.43□□□□□ -0.58
SF3B3-206ENST00000565990 SH3YL1Q96HL8 342 aaPredicted RBP11.43□□□□□ -0.58
SF3B3-206ENST00000565990 MUS81Q96NY9 551 aa11.43□□□□□ -0.58
SF3B3-206ENST00000565990 ADAM19Q9H013 955 aa11.43□□□□□ -0.58
SF3B3-206ENST00000565990 ACER3Q9NUN7 267 aa11.43□□□□□ -0.58
SF3B3-206ENST00000565990 MED17Q9NVC6 651 aa11.43□□□□□ -0.58
SF3B3-206ENST00000565990 ASF1BQ9NVP2 202 aa11.43□□□□□ -0.58
SF3B3-206ENST00000565990 FAIMQ9NVQ4 179 aa11.43□□□□□ -0.58
SF3B3-206ENST00000565990 ADPRHL2Q9NX46 363 aa11.43□□□□□ -0.58
SF3B3-206ENST00000565990 KLHL28Q9NXS3 571 aa11.43□□□□□ -0.58
SF3B3-206ENST00000565990 GALNT8Q9NY28 637 aa11.43□□□□□ -0.58
SF3B3-206ENST00000565990 ZFYVE26Q68DK2 2539 aa11.42□□□□□ -0.58
SF3B3-206ENST00000565990 A0A1B0GVG6 124 aa11.42□□□□□ -0.58
SF3B3-206ENST00000565990 B8ZZF3 427 aa11.42□□□□□ -0.58
SF3B3-206ENST00000565990 NPIPA5E9PKD4 350 aa11.42□□□□□ -0.58
SF3B3-206ENST00000565990 LINC01387J3KSC0 135 aa11.42□□□□□ -0.58
SF3B3-206ENST00000565990 HCN1O60741 890 aa11.42□□□□□ -0.58
SF3B3-206ENST00000565990 FMO6PO60774 539 aa11.42□□□□□ -0.58
SF3B3-206ENST00000565990 TRAPPC6AO75865 159 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms