RNA–Protein interactions for RNA: ENST00000565471.6

CLN6-206, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2 BASIC

Gene CLN6, Length 1,075 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-206ENST00000565471 HMGN2P46Q86SG4 172 aa17.61■□□□□ 0.41
CLN6-206ENST00000565471 CNOT9Q92600 299 aaKnown RBP17.61■□□□□ 0.41
CLN6-206ENST00000565471 TLCD1Q96CP7 247 aa17.61■□□□□ 0.41
CLN6-206ENST00000565471 COX4I2Q96KJ9 171 aa17.61■□□□□ 0.41
CLN6-206ENST00000565471 Q96MF0 132 aa17.61■□□□□ 0.41
CLN6-206ENST00000565471 CXorf56Q9H5V9 222 aa17.61■□□□□ 0.41
CLN6-206ENST00000565471 ESRP2Q9H6T0 727 aaKnown RBP17.61■□□□□ 0.41
CLN6-206ENST00000565471 MANSC1Q9H8J5 431 aa17.61■□□□□ 0.41
CLN6-206ENST00000565471 MTHFD2LQ9H903 347 aaPredicted RBP17.61■□□□□ 0.41
CLN6-206ENST00000565471 PRSS50Q9UI38 385 aa17.61■□□□□ 0.41
CLN6-206ENST00000565471 RNF115Q9Y4L5 304 aa17.61■□□□□ 0.41
CLN6-206ENST00000565471 PRR14LQ5THK1 2151 aa17.61■□□□□ 0.41
CLN6-206ENST00000565471 ROS1P08922 2347 aa17.61■□□□□ 0.41
CLN6-206ENST00000565471 FAAHO00519 579 aa17.6■□□□□ 0.41
CLN6-206ENST00000565471 RFXANKO14593 260 aa17.6■□□□□ 0.41
CLN6-206ENST00000565471 ADAM11O75078 769 aa17.6■□□□□ 0.41
CLN6-206ENST00000565471 ERLIN1O75477 346 aa17.6■□□□□ 0.41
CLN6-206ENST00000565471 KRT75O95678 551 aa17.6■□□□□ 0.41
CLN6-206ENST00000565471 GSNP06396 782 aa17.6■□□□□ 0.41
CLN6-206ENST00000565471 COX5AP20674 150 aa17.6■□□□□ 0.41
CLN6-206ENST00000565471 IDH2P48735 452 aaKnown RBP17.6■□□□□ 0.41
CLN6-206ENST00000565471 MAGOHP61326 146 aaKnown RBP17.6■□□□□ 0.41
CLN6-206ENST00000565471 GNA13Q14344 377 aa17.6■□□□□ 0.41
CLN6-206ENST00000565471 SEZ6L2Q6UXD5 910 aa17.6■□□□□ 0.41
CLN6-206ENST00000565471 ADGRG3Q86Y34 549 aa17.6■□□□□ 0.41
CLN6-206ENST00000565471 WDR60Q8WVS4 1066 aa17.6■□□□□ 0.41
CLN6-206ENST00000565471 AKAP1Q92667 903 aaKnown RBP eCLIP17.6■□□□□ 0.413e-8■■□□□ 12.7
CLN6-206ENST00000565471 ARL5BQ96KC2 179 aa17.6■□□□□ 0.41
CLN6-206ENST00000565471 SMR3AQ99954 134 aa17.6■□□□□ 0.41
CLN6-206ENST00000565471 BDH2Q9BUT1 245 aa17.6■□□□□ 0.41
CLN6-206ENST00000565471 ZNF701Q9NV72 531 aaPredicted RBP17.6■□□□□ 0.41
CLN6-206ENST00000565471 ZNF716A6NP11 495 aa17.59■□□□□ 0.41
CLN6-206ENST00000565471 SLC22A3O75751 556 aa17.59■□□□□ 0.41
CLN6-206ENST00000565471 DBIP07108 87 aaKnown RBP17.59■□□□□ 0.41
CLN6-206ENST00000565471 CD3EP07766 207 aa17.59■□□□□ 0.41
CLN6-206ENST00000565471 NR2F1P10589 423 aa17.59■□□□□ 0.41
CLN6-206ENST00000565471 EDNRAP25101 427 aa17.59■□□□□ 0.41
CLN6-206ENST00000565471 MAP2K6P52564 334 aa17.59■□□□□ 0.41
CLN6-206ENST00000565471 GSTA3Q16772 222 aa17.59■□□□□ 0.41
CLN6-206ENST00000565471 COX20Q5RI15 118 aa17.59■□□□□ 0.41
CLN6-206ENST00000565471 NXNQ6DKJ4 435 aa17.59■□□□□ 0.41
CLN6-206ENST00000565471 ALKBH2Q6NS38 261 aa17.59■□□□□ 0.41
CLN6-206ENST00000565471 MSANTD1Q6ZTZ1 278 aa17.59■□□□□ 0.41
CLN6-206ENST00000565471 ZNF100Q8IYN0 542 aa17.59■□□□□ 0.41
CLN6-206ENST00000565471 PIGXQ8TBF5 258 aa17.59■□□□□ 0.41
CLN6-206ENST00000565471 PIWIL2Q8TC59 973 aaKnown RBP17.59■□□□□ 0.41
CLN6-206ENST00000565471 ZNF775Q96BV0 537 aaPredicted RBP17.59■□□□□ 0.41
CLN6-206ENST00000565471 TMBIM4Q9HC24 238 aa17.59■□□□□ 0.41
CLN6-206ENST00000565471 SDR39U1Q9NRG7 319 aaPredicted RBP17.59■□□□□ 0.41
CLN6-206ENST00000565471 ZIM2Q9NZV7 527 aa17.59■□□□□ 0.41
CLN6-206ENST00000565471 TRAPPC4Q9Y296 219 aa17.59■□□□□ 0.41
CLN6-206ENST00000565471 TMED7-TICAM2A0A0A6YYA0 188 aa17.58■□□□□ 0.4
CLN6-206ENST00000565471 AP3D1O14617 1153 aa17.58■□□□□ 0.4
CLN6-206ENST00000565471 GPR171O14626 319 aa17.58■□□□□ 0.4
CLN6-206ENST00000565471 KLF11O14901 512 aa17.58■□□□□ 0.4
CLN6-206ENST00000565471 ZNF208O43345 1280 aa17.58■□□□□ 0.4
CLN6-206ENST00000565471 LYZL6O75951 148 aa17.58■□□□□ 0.4
CLN6-206ENST00000565471 ZCCHC18P0CG32 403 aa17.58■□□□□ 0.4
CLN6-206ENST00000565471 UQCRBP14927 111 aa17.58■□□□□ 0.4
CLN6-206ENST00000565471 IL7RP16871 459 aa17.58■□□□□ 0.4
CLN6-206ENST00000565471 POLR2HP52434 150 aaKnown RBP17.58■□□□□ 0.4
CLN6-206ENST00000565471 MVDP53602 400 aa17.58■□□□□ 0.4
CLN6-206ENST00000565471 SLC16A1P53985 500 aa17.58■□□□□ 0.4
CLN6-206ENST00000565471 CAPRIN1Q14444 709 aaKnown RBP17.58■□□□□ 0.4
CLN6-206ENST00000565471 SLC9B1Q4ZJI4 515 aa17.58■□□□□ 0.4
CLN6-206ENST00000565471 CLEC9AQ6UXN8 241 aa17.58■□□□□ 0.4
CLN6-206ENST00000565471 P2RY8Q86VZ1 359 aa17.58■□□□□ 0.4
CLN6-206ENST00000565471 LILRB1Q8NHL6 650 aaPredicted RBP17.58■□□□□ 0.4
CLN6-206ENST00000565471 PNPT1Q8TCS8 783 aaKnown RBP17.58■□□□□ 0.4
CLN6-206ENST00000565471 OR11A1Q9GZK7 315 aa17.58■□□□□ 0.4
CLN6-206ENST00000565471 CALML5Q9NZT1 146 aa17.58■□□□□ 0.4
CLN6-206ENST00000565471 TMEM181Q9P2C4 612 aa17.58■□□□□ 0.4
CLN6-206ENST00000565471 OSGIN1Q9UJX0 560 aa17.58■□□□□ 0.4
CLN6-206ENST00000565471 PRDM4Q9UKN5 801 aa17.58■□□□□ 0.4
CLN6-206ENST00000565471 TMED7Q9Y3B3 224 aa17.58■□□□□ 0.4
CLN6-206ENST00000565471 DSPPQ9NZW4 1301 aa17.57■□□□□ 0.4
CLN6-206ENST00000565471 H7C1Q1 480 aa17.57■□□□□ 0.4
CLN6-206ENST00000565471 PGM3O95394 542 aa17.57■□□□□ 0.4
CLN6-206ENST00000565471 HEXAP06865 529 aa17.57■□□□□ 0.4
CLN6-206ENST00000565471 IGHV1-2P23083 117 aa17.57■□□□□ 0.4
CLN6-206ENST00000565471 SLC1A3P43003 542 aa17.57■□□□□ 0.4
CLN6-206ENST00000565471 H3F3AP84243 136 aa17.57■□□□□ 0.4
CLN6-206ENST00000565471 LTBQ06643 244 aa17.57■□□□□ 0.4
CLN6-206ENST00000565471 EPS8Q12929 822 aa17.57■□□□□ 0.4
CLN6-206ENST00000565471 MAPK11Q15759 364 aa17.57■□□□□ 0.4
CLN6-206ENST00000565471 TIMM23BQ5SRD1 257 aa17.57■□□□□ 0.4
CLN6-206ENST00000565471 BEND6Q5SZJ8 279 aaPredicted RBP17.57■□□□□ 0.4
CLN6-206ENST00000565471 MRPL2Q5T653 305 aaKnown RBP17.57■□□□□ 0.4
CLN6-206ENST00000565471 FBXW9Q5XUX1 488 aa17.57■□□□□ 0.4
CLN6-206ENST00000565471 MAVSQ7Z434 540 aa17.57■□□□□ 0.4
CLN6-206ENST00000565471 PEX5LQ8IYB4 626 aa17.57■□□□□ 0.4
CLN6-206ENST00000565471 ZNF440Q8IYI8 595 aa17.57■□□□□ 0.4
CLN6-206ENST00000565471 FBXW5Q969U6 566 aa17.57■□□□□ 0.4
CLN6-206ENST00000565471 APH1AQ96BI3 265 aa17.57■□□□□ 0.4
CLN6-206ENST00000565471 DDIT4LQ96D03 193 aa17.57■□□□□ 0.4
CLN6-206ENST00000565471 RMND5AQ9H871 391 aa17.57■□□□□ 0.4
CLN6-206ENST00000565471 SLC6A13Q9NSD5 602 aa17.57■□□□□ 0.4
CLN6-206ENST00000565471 P2RX2Q9UBL9 471 aa17.57■□□□□ 0.4
CLN6-206ENST00000565471 NOSIPQ9Y314 301 aaKnown RBP17.57■□□□□ 0.4
CLN6-206ENST00000565471 CFAP73A6NFT4 308 aa17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms