RNA–Protein interactions for RNA: ENST00000564540.5

UBR1-205, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 735 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-205ENST00000564540 CHRNB3Q05901 458 aa2.67□□□□□ -1.98
UBR1-205ENST00000564540 CEP55Q53EZ4 464 aa2.67□□□□□ -1.98
UBR1-205ENST00000564540 C1orf146Q5VVC0 180 aa2.67□□□□□ -1.98
UBR1-205ENST00000564540 RAET1GQ6H3X3 334 aa2.67□□□□□ -1.98
UBR1-205ENST00000564540 FAHD2BQ6P2I3 314 aaPredicted RBP2.67□□□□□ -1.98
UBR1-205ENST00000564540 RFLNAQ6ZTI6 216 aa2.67□□□□□ -1.98
UBR1-205ENST00000564540 APTXQ7Z2E3 356 aaKnown RBP2.67□□□□□ -1.98
UBR1-205ENST00000564540 BCORP1Q8N888 145 aa2.67□□□□□ -1.98
UBR1-205ENST00000564540 OR5AU1Q8NGC0 362 aa2.67□□□□□ -1.98
UBR1-205ENST00000564540 AENQ8WTP8 325 aaKnown RBP2.67□□□□□ -1.98
UBR1-205ENST00000564540 CHCHD10Q8WYQ3 142 aaPredicted RBP2.67□□□□□ -1.98
UBR1-205ENST00000564540 PINX1Q96BK5 328 aaKnown RBP2.67□□□□□ -1.98
UBR1-205ENST00000564540 C14orf79Q96F83 325 aa2.67□□□□□ -1.98
UBR1-205ENST00000564540 FAHD2AQ96GK7 314 aa2.67□□□□□ -1.98
UBR1-205ENST00000564540 DUSP16Q9BY84 665 aa2.67□□□□□ -1.98
UBR1-205ENST00000564540 SLC25A22Q9H936 323 aa2.67□□□□□ -1.98
UBR1-205ENST00000564540 RDH8Q9NYR8 311 aa2.67□□□□□ -1.98
UBR1-205ENST00000564540 TREM2Q9NZC2 230 aa2.67□□□□□ -1.98
UBR1-205ENST00000564540 TMOD2Q9NZR1 351 aa2.67□□□□□ -1.98
UBR1-205ENST00000564540 HPCAL4Q9UM19 191 aa2.67□□□□□ -1.98
UBR1-205ENST00000564540 GAKO14976 1311 aa2.67□□□□□ -1.98
UBR1-205ENST00000564540 KDRP35968 1356 aa2.66□□□□□ -1.98
UBR1-205ENST00000564540 FAM230AA0A1W2PPH8 454 aa2.66□□□□□ -1.98
UBR1-205ENST00000564540 ESYT2A0FGR8 921 aa2.66□□□□□ -1.98
UBR1-205ENST00000564540 CLRN2A0PK11 232 aa2.66□□□□□ -1.98
UBR1-205ENST00000564540 HELTA6NFD8 242 aa2.66□□□□□ -1.98
UBR1-205ENST00000564540 GPR89AB7ZAQ6 455 aa2.66□□□□□ -1.98
UBR1-205ENST00000564540 KRTAP4-16G5E9R7 235 aaPredicted RBP2.66□□□□□ -1.98
UBR1-205ENST00000564540 ANGPT2O15123 496 aa2.66□□□□□ -1.98
UBR1-205ENST00000564540 TOM1L1O75674 476 aa2.66□□□□□ -1.98
UBR1-205ENST00000564540 PALMO75781 387 aa2.66□□□□□ -1.98
UBR1-205ENST00000564540 TNFSF13O75888 250 aa2.66□□□□□ -1.98
UBR1-205ENST00000564540 SLC25A27O95847 323 aa2.66□□□□□ -1.98
UBR1-205ENST00000564540 OPN1MWP04001 364 aa2.66□□□□□ -1.98
UBR1-205ENST00000564540 PCCBP05166 539 aa2.66□□□□□ -1.98
UBR1-205ENST00000564540 GPR89BP0CG08 455 aa2.66□□□□□ -1.98
UBR1-205ENST00000564540 OPN1MW2P0DN77 364 aa2.66□□□□□ -1.98
UBR1-205ENST00000564540 OPN1MW3P0DN78 364 aa2.66□□□□□ -1.98
UBR1-205ENST00000564540 DNAJB1P25685 340 aa2.66□□□□□ -1.98
UBR1-205ENST00000564540 SH3BGRP55822 239 aaPredicted RBP2.66□□□□□ -1.98
UBR1-205ENST00000564540 ACTR1AP61163 376 aa2.66□□□□□ -1.98
UBR1-205ENST00000564540 RIPPLY1Q0D2K3 151 aa2.66□□□□□ -1.98
UBR1-205ENST00000564540 RAB40BQ12829 278 aa2.66□□□□□ -1.98
UBR1-205ENST00000564540 SPP2Q13103 211 aa2.66□□□□□ -1.98
UBR1-205ENST00000564540 MAPK6Q16659 721 aa2.66□□□□□ -1.98
UBR1-205ENST00000564540 RIPPLY2Q5TAB7 128 aa2.66□□□□□ -1.98
UBR1-205ENST00000564540 AFTPHQ6ULP2 937 aa2.66□□□□□ -1.98
UBR1-205ENST00000564540 COX15Q7KZN9 410 aa2.66□□□□□ -1.98
UBR1-205ENST00000564540 ERASQ7Z444 233 aa2.66□□□□□ -1.98
UBR1-205ENST00000564540 LHFPL4Q7Z7J7 247 aa2.66□□□□□ -1.98
UBR1-205ENST00000564540 SAXO1Q8IYX7 474 aa2.66□□□□□ -1.98
UBR1-205ENST00000564540 HPDLQ96IR7 371 aa2.66□□□□□ -1.98
UBR1-205ENST00000564540 FAM210BQ96KR6 192 aa2.66□□□□□ -1.98
UBR1-205ENST00000564540 GAL3ST1Q99999 423 aa2.66□□□□□ -1.98
UBR1-205ENST00000564540 NRIP2Q9BQI9 281 aa2.66□□□□□ -1.98
UBR1-205ENST00000564540 ERP44Q9BS26 406 aa2.66□□□□□ -1.98
UBR1-205ENST00000564540 THUMPD2Q9BTF0 503 aaKnown RBP2.66□□□□□ -1.98
UBR1-205ENST00000564540 RAB17Q9H0T7 212 aa2.66□□□□□ -1.98
UBR1-205ENST00000564540 ECT2Q9H8V3 914 aa2.66□□□□□ -1.98
UBR1-205ENST00000564540 AGPAT5Q9NUQ2 364 aa2.66□□□□□ -1.98
UBR1-205ENST00000564540 WARS2Q9UGM6 360 aaKnown RBP2.66□□□□□ -1.98
UBR1-205ENST00000564540 PHF11Q9UIL8 331 aa2.66□□□□□ -1.98
UBR1-205ENST00000564540 TBX21Q9UL17 535 aa2.66□□□□□ -1.98
UBR1-205ENST00000564540 U3KQV3 271 aa2.66□□□□□ -1.98
UBR1-205ENST00000564540 SLIT3O75094 1523 aa2.65□□□□□ -1.99
UBR1-205ENST00000564540 IGLV4-60A0A075B6I1 120 aa2.65□□□□□ -1.99
UBR1-205ENST00000564540 H0YCG3 227 aa2.65□□□□□ -1.99
UBR1-205ENST00000564540 LANCL1O43813 399 aa2.65□□□□□ -1.99
UBR1-205ENST00000564540 ECI2O75521 394 aa2.65□□□□□ -1.99
UBR1-205ENST00000564540 KIAA0754O94854 1291 aa2.65□□□□□ -1.99
UBR1-205ENST00000564540 GNA14O95837 355 aa2.65□□□□□ -1.99
UBR1-205ENST00000564540 IGF1P05019 195 aa2.65□□□□□ -1.99
UBR1-205ENST00000564540 CALB2P22676 271 aa2.65□□□□□ -1.99
UBR1-205ENST00000564540 CD80P33681 288 aa2.65□□□□□ -1.99
UBR1-205ENST00000564540 GBX2P52951 348 aaPredicted RBP2.65□□□□□ -1.99
UBR1-205ENST00000564540 PLK1P53350 603 aa2.65□□□□□ -1.99
UBR1-205ENST00000564540 BIDP55957 195 aa2.65□□□□□ -1.99
UBR1-205ENST00000564540 SCGB2A2Q13296 93 aa2.65□□□□□ -1.99
UBR1-205ENST00000564540 LINC01620Q4KN68 170 aa2.65□□□□□ -1.99
UBR1-205ENST00000564540 OR52W1Q6IF63 320 aa2.65□□□□□ -1.99
UBR1-205ENST00000564540 CBWD2Q8IUF1 395 aa2.65□□□□□ -1.99
UBR1-205ENST00000564540 NKAPP1Q8N9T2 125 aa2.65□□□□□ -1.99
UBR1-205ENST00000564540 NANPQ8TBE9 248 aa2.65□□□□□ -1.99
UBR1-205ENST00000564540 SELENOMQ8WWX9 145 aa2.65□□□□□ -1.99
UBR1-205ENST00000564540 CNDP1Q96KN2 507 aa2.65□□□□□ -1.99
UBR1-205ENST00000564540 KCNA7Q96RP8 456 aa2.65□□□□□ -1.99
UBR1-205ENST00000564540 TSG101Q99816 390 aa2.65□□□□□ -1.99
UBR1-205ENST00000564540 PELOQ9BRX2 385 aaKnown RBP2.65□□□□□ -1.99
UBR1-205ENST00000564540 RSPO3Q9BXY4 272 aaPredicted RBP2.65□□□□□ -1.99
UBR1-205ENST00000564540 RBAKQ9NYW8 714 aaPredicted RBP2.65□□□□□ -1.99
UBR1-205ENST00000564540 RABL2AQ9UBK7 228 aaPredicted RBP2.65□□□□□ -1.99
UBR1-205ENST00000564540 KIF25Q9UIL4 384 aa2.65□□□□□ -1.99
UBR1-205ENST00000564540 ASF1AQ9Y294 204 aa2.65□□□□□ -1.99
UBR1-205ENST00000564540 SPACA6W5XKT8 324 aa2.65□□□□□ -1.99
UBR1-205ENST00000564540 TRIOBPQ9H2D6 2365 aa2.65□□□□□ -1.99
UBR1-205ENST00000564540 MAP3K15Q6ZN16 1313 aa2.65□□□□□ -1.99
UBR1-205ENST00000564540 A0A0U1RQV5 110 aa2.64□□□□□ -1.99
UBR1-205ENST00000564540 A0A1B0GWJ7 208 aa2.64□□□□□ -1.99
UBR1-205ENST00000564540 C11orf94C9JXX5 98 aa2.64□□□□□ -1.99
UBR1-205ENST00000564540 UBXN8O00124 270 aa2.64□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms