RNA–Protein interactions for RNA: ENST00000563226.1

SMPD3-203, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 1 (best) BASIC

Gene SMPD3, Length 2,093 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-203ENST00000563226 OR1N1Q8NGS0 311 aa17.49■□□□□ 0.39
SMPD3-203ENST00000563226 UFD1Q92890 307 aa17.49■□□□□ 0.39
SMPD3-203ENST00000563226 KCNS3Q9BQ31 491 aa17.49■□□□□ 0.39
SMPD3-203ENST00000563226 SLC7A5P2Q9GIP4 190 aa17.49■□□□□ 0.39
SMPD3-203ENST00000563226 GAREM1Q9H706 876 aa17.49■□□□□ 0.39
SMPD3-203ENST00000563226 ISYNA1Q9NPH2 558 aa17.49■□□□□ 0.39
SMPD3-203ENST00000563226 SUSD2Q9UGT4 822 aa17.49■□□□□ 0.39
SMPD3-203ENST00000563226 RIIAD1A6NNX1 92 aa17.49■□□□□ 0.39
SMPD3-203ENST00000563226 C12orf71A8MTZ7 269 aa17.49■□□□□ 0.39
SMPD3-203ENST00000563226 PATE3B3GLJ2 98 aa17.49■□□□□ 0.39
SMPD3-203ENST00000563226 ZNF264O43296 627 aa17.49■□□□□ 0.39
SMPD3-203ENST00000563226 GYPBP06028 91 aa17.49■□□□□ 0.39
SMPD3-203ENST00000563226 SLC2A5P22732 501 aa17.49■□□□□ 0.39
SMPD3-203ENST00000563226 SQSTM1Q13501 440 aa17.49■□□□□ 0.39
SMPD3-203ENST00000563226 C22orf42Q6IC83 251 aa17.49■□□□□ 0.39
SMPD3-203ENST00000563226 STT3BQ8TCJ2 826 aa17.49■□□□□ 0.39
SMPD3-203ENST00000563226 CHPT1Q8WUD6 406 aa17.49■□□□□ 0.39
SMPD3-203ENST00000563226 EDAQ92838 391 aa17.49■□□□□ 0.39
SMPD3-203ENST00000563226 ABTB1Q969K4 478 aaPredicted RBP17.49■□□□□ 0.39
SMPD3-203ENST00000563226 ERMAPQ96PL5 475 aaPredicted RBP17.49■□□□□ 0.39
SMPD3-203ENST00000563226 TIMP4Q99727 224 aa17.49■□□□□ 0.39
SMPD3-203ENST00000563226 JAM3Q9BX67 310 aa17.49■□□□□ 0.39
SMPD3-203ENST00000563226 ISG20L2Q9H9L3 353 aaKnown RBP17.49■□□□□ 0.39
SMPD3-203ENST00000563226 CHRNA9Q9UGM1 479 aa17.49■□□□□ 0.39
SMPD3-203ENST00000563226 SRPK3Q9UPE1 567 aa17.49■□□□□ 0.39
SMPD3-203ENST00000563226 GTPBP1O00178 669 aaKnown RBP17.48■□□□□ 0.39
SMPD3-203ENST00000563226 MRPL3P09001 348 aaKnown RBP17.48■□□□□ 0.39
SMPD3-203ENST00000563226 ANKRD34CP0C6C1 535 aa17.48■□□□□ 0.39
SMPD3-203ENST00000563226 PEPDP12955 493 aa17.48■□□□□ 0.39
SMPD3-203ENST00000563226 PAICSP22234 425 aaKnown RBP17.48■□□□□ 0.39
SMPD3-203ENST00000563226 SOX6P35712 828 aa17.48■□□□□ 0.39
SMPD3-203ENST00000563226 SLC16A1P53985 500 aa17.48■□□□□ 0.39
SMPD3-203ENST00000563226 RPS7P62081 194 aaKnown RBP17.48■□□□□ 0.39
SMPD3-203ENST00000563226 RGS21Q2M5E4 152 aa17.48■□□□□ 0.39
SMPD3-203ENST00000563226 WBP2NLQ6ICG8 309 aa17.48■□□□□ 0.39
SMPD3-203ENST00000563226 ZNF322Q6U7Q0 402 aaPredicted RBP17.48■□□□□ 0.39
SMPD3-203ENST00000563226 ATG4DQ86TL0 474 aaPredicted RBP17.48■□□□□ 0.39
SMPD3-203ENST00000563226 PLPP5Q8NEB5 264 aa17.48■□□□□ 0.39
SMPD3-203ENST00000563226 SMAP2Q8WU79 429 aaPredicted RBP17.48■□□□□ 0.39
SMPD3-203ENST00000563226 DCLRE1CQ96SD1 692 aaKnown RBP17.48■□□□□ 0.39
SMPD3-203ENST00000563226 TEAD3Q99594 435 aa17.48■□□□□ 0.39
SMPD3-203ENST00000563226 EXOSC3Q9NQT5 275 aaKnown RBP17.48■□□□□ 0.39
SMPD3-203ENST00000563226 SNTG1Q9NSN8 517 aa17.48■□□□□ 0.39
SMPD3-203ENST00000563226 ADAM18Q9Y3Q7 739 aa17.48■□□□□ 0.39
SMPD3-203ENST00000563226 PCNX3Q9H6A9 2034 aa17.48■□□□□ 0.39
SMPD3-203ENST00000563226 LAMTOR5O43504 91 aa17.48■□□□□ 0.39
SMPD3-203ENST00000563226 TSPAN2O60636 221 aa17.48■□□□□ 0.39
SMPD3-203ENST00000563226 NDUFB2O95178 105 aa17.48■□□□□ 0.39
SMPD3-203ENST00000563226 HK1P19367 917 aa17.48■□□□□ 0.39
SMPD3-203ENST00000563226 CALRP27797 417 aaKnown RBP17.48■□□□□ 0.39
SMPD3-203ENST00000563226 PSMD7P51665 324 aa17.48■□□□□ 0.39
SMPD3-203ENST00000563226 ACY1Q03154 408 aa17.48■□□□□ 0.39
SMPD3-203ENST00000563226 ZNF117Q03924 483 aa17.48■□□□□ 0.39
SMPD3-203ENST00000563226 MXD1Q05195 221 aa17.48■□□□□ 0.39
SMPD3-203ENST00000563226 HLA-DQA1Q5Y7H0 255 aa17.48■□□□□ 0.39
SMPD3-203ENST00000563226 PWWP2BQ6NUJ5 590 aa17.48■□□□□ 0.39
SMPD3-203ENST00000563226 SYT14Q8NB59 555 aa17.48■□□□□ 0.39
SMPD3-203ENST00000563226 SDR9C7Q8NEX9 313 aa17.48■□□□□ 0.39
SMPD3-203ENST00000563226 OR4D9Q8NGE8 314 aa17.48■□□□□ 0.39
SMPD3-203ENST00000563226 OR52N1Q8NH53 320 aa17.48■□□□□ 0.39
SMPD3-203ENST00000563226 C1GALT1C1Q96EU7 318 aa17.48■□□□□ 0.39
SMPD3-203ENST00000563226 ART5Q96L15 291 aa17.48■□□□□ 0.39
SMPD3-203ENST00000563226 CCDC74BQ96LY2 380 aa17.48■□□□□ 0.39
SMPD3-203ENST00000563226 COPS7AQ9UBW8 275 aa17.48■□□□□ 0.39
SMPD3-203ENST00000563226 BAIAP2Q9UQB8 552 aa17.48■□□□□ 0.39
SMPD3-203ENST00000563226 IER3IP1Q9Y5U9 82 aa17.48■□□□□ 0.39
SMPD3-203ENST00000563226 WDFY4Q6ZS81 3184 aa17.47■□□□□ 0.39
SMPD3-203ENST00000563226 ELOA3DA6NLF2 546 aaPredicted RBP17.47■□□□□ 0.39
SMPD3-203ENST00000563226 CTDSP2O14595 271 aa17.47■□□□□ 0.39
SMPD3-203ENST00000563226 OR7A10O76100 309 aa17.47■□□□□ 0.39
SMPD3-203ENST00000563226 CLEC2LP0C7M8 214 aa17.47■□□□□ 0.39
SMPD3-203ENST00000563226 HIST1H1CP16403 213 aaKnown RBP17.47■□□□□ 0.39
SMPD3-203ENST00000563226 ZNF3P17036 446 aa17.47■□□□□ 0.39
SMPD3-203ENST00000563226 IL12BP29460 328 aa17.47■□□□□ 0.39
SMPD3-203ENST00000563226 CD40LGP29965 261 aa17.47■□□□□ 0.39
SMPD3-203ENST00000563226 DCAF7P61962 342 aa17.47■□□□□ 0.39
SMPD3-203ENST00000563226 FABP5Q01469 135 aa17.47■□□□□ 0.39
SMPD3-203ENST00000563226 PLCXD2Q0VAA5 305 aa17.47■□□□□ 0.39
SMPD3-203ENST00000563226 ELOA3BQ3SY89 546 aa17.47■□□□□ 0.39
SMPD3-203ENST00000563226 VASNQ6EMK4 673 aa17.47■□□□□ 0.39
SMPD3-203ENST00000563226 ARHGAP11AQ6P4F7 1023 aa17.47■□□□□ 0.39
SMPD3-203ENST00000563226 RABEPKQ7Z6M1 372 aa17.47■□□□□ 0.39
SMPD3-203ENST00000563226 MARCH3Q86UD3 253 aa17.47■□□□□ 0.39
SMPD3-203ENST00000563226 KLBQ86Z14 1044 aa17.47■□□□□ 0.39
SMPD3-203ENST00000563226 ZNF441Q8N8Z8 693 aa17.47■□□□□ 0.39
SMPD3-203ENST00000563226 ELOA3Q8NG57 546 aa17.47■□□□□ 0.39
SMPD3-203ENST00000563226 OR52E2Q8NGJ4 325 aa17.47■□□□□ 0.39
SMPD3-203ENST00000563226 OR4K13Q8NH42 304 aa17.47■□□□□ 0.39
SMPD3-203ENST00000563226 B4GALNT2Q8NHY0 566 aa17.47■□□□□ 0.39
SMPD3-203ENST00000563226 OMA1Q96E52 524 aa17.47■□□□□ 0.39
SMPD3-203ENST00000563226 NUAK2Q9H093 628 aa17.47■□□□□ 0.39
SMPD3-203ENST00000563226 MRTO4Q9UKD2 239 aaKnown RBP17.47■□□□□ 0.39
SMPD3-203ENST00000563226 SLC22A31A6NKX4 558 aa17.46■□□□□ 0.39
SMPD3-203ENST00000563226 TO15178 435 aa17.46■□□□□ 0.39
SMPD3-203ENST00000563226 CDRT1O95170 752 aa17.46■□□□□ 0.39
SMPD3-203ENST00000563226 ABCD3P28288 659 aa17.46■□□□□ 0.39
SMPD3-203ENST00000563226 PPP5CP53041 499 aa17.46■□□□□ 0.39
SMPD3-203ENST00000563226 CRTC2Q53ET0 693 aaPredicted RBP17.46■□□□□ 0.39
SMPD3-203ENST00000563226 SLC29A4Q7RTT9 530 aa17.46■□□□□ 0.39
SMPD3-203ENST00000563226 ACBD7Q8N6N7 88 aa17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms