RNA–Protein interactions for RNA: ENST00000563220.1

COMMD4-208, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 1,897 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-208ENST00000563220 THSD4Q6ZMP0 1018 aa16.44■□□□□ 0.22
COMMD4-208ENST00000563220 GPR141Q7Z602 305 aa16.44■□□□□ 0.22
COMMD4-208ENST00000563220 FAM26EQ8N5C1 309 aa16.44■□□□□ 0.22
COMMD4-208ENST00000563220 FANK1Q8TC84 345 aa16.44■□□□□ 0.22
COMMD4-208ENST00000563220 SGTBQ96EQ0 304 aa16.44■□□□□ 0.22
COMMD4-208ENST00000563220 SIGLEC11Q96RL6 698 aa16.44■□□□□ 0.22
COMMD4-208ENST00000563220 GPR87Q9BY21 358 aa16.44■□□□□ 0.22
COMMD4-208ENST00000563220 HHATLQ9HCP6 504 aa16.44■□□□□ 0.22
COMMD4-208ENST00000563220 FBXL4Q9UKA2 621 aa16.44■□□□□ 0.22
COMMD4-208ENST00000563220 HRH3Q9Y5N1 445 aa16.44■□□□□ 0.22
COMMD4-208ENST00000563220 MRPS18BQ9Y676 258 aaKnown RBP16.44■□□□□ 0.22
COMMD4-208ENST00000563220 AHCTF1Q8WYP5 2266 aa16.43■□□□□ 0.22
COMMD4-208ENST00000563220 ZFHX2Q9C0A1 2572 aaPredicted RBP16.43■□□□□ 0.22
COMMD4-208ENST00000563220 C21orf140B9A014 251 aa16.43■□□□□ 0.22
COMMD4-208ENST00000563220 RGS10O43665 173 aa16.43■□□□□ 0.22
COMMD4-208ENST00000563220 JUNBP17275 347 aaPredicted RBP16.43■□□□□ 0.22
COMMD4-208ENST00000563220 PCSK6P29122 969 aa16.43■□□□□ 0.22
COMMD4-208ENST00000563220 MLLT10P55197 1068 aa16.43■□□□□ 0.22
COMMD4-208ENST00000563220 MVKQ03426 396 aa16.43■□□□□ 0.22
COMMD4-208ENST00000563220 C17orf67Q0P5P2 114 aa16.43■□□□□ 0.22
COMMD4-208ENST00000563220 QPRTQ15274 297 aa16.43■□□□□ 0.22
COMMD4-208ENST00000563220 PGGHGQ32M88 737 aa16.43■□□□□ 0.22
COMMD4-208ENST00000563220 OAFQ86UD1 273 aa16.43■□□□□ 0.22
COMMD4-208ENST00000563220 TMPRSS12Q86WS5 348 aa16.43■□□□□ 0.22
COMMD4-208ENST00000563220 CACTIN-AS1Q8N1I8 211 aa16.43■□□□□ 0.22
COMMD4-208ENST00000563220 LRRC17Q8N6Y2 441 aa16.43■□□□□ 0.22
COMMD4-208ENST00000563220 OR2T33Q8NG76 320 aa16.43■□□□□ 0.22
COMMD4-208ENST00000563220 SLC19A3Q9BZV2 496 aa16.43■□□□□ 0.22
COMMD4-208ENST00000563220 P4HTMQ9NXG6 502 aa16.43■□□□□ 0.22
COMMD4-208ENST00000563220 GPR83Q9NYM4 423 aa16.43■□□□□ 0.22
COMMD4-208ENST00000563220 OSGIN1Q9UJX0 560 aa16.43■□□□□ 0.22
COMMD4-208ENST00000563220 YARS2Q9Y2Z4 477 aaKnown RBP16.43■□□□□ 0.22
COMMD4-208ENST00000563220 SNX5Q9Y5X3 404 aa16.43■□□□□ 0.22
COMMD4-208ENST00000563220 TM4SF5O14894 197 aa16.42■□□□□ 0.22
COMMD4-208ENST00000563220 RCBTB2O95199 551 aa16.42■□□□□ 0.22
COMMD4-208ENST00000563220 HPP00738 406 aa16.42■□□□□ 0.22
COMMD4-208ENST00000563220 CSRP1P21291 193 aaKnown RBP16.42■□□□□ 0.22
COMMD4-208ENST00000563220 EMX1Q04741 257 aaPredicted RBP16.42■□□□□ 0.22
COMMD4-208ENST00000563220 OCLNQ16625 522 aa16.42■□□□□ 0.22
COMMD4-208ENST00000563220 SLC25A30Q5SVS4 291 aa16.42■□□□□ 0.22
COMMD4-208ENST00000563220 SMARCD3Q6STE5 483 aa16.42■□□□□ 0.22
COMMD4-208ENST00000563220 SLC46A3Q7Z3Q1 461 aa16.42■□□□□ 0.22
COMMD4-208ENST00000563220 RPS19BP1Q86WX3 136 aaKnown RBP16.42■□□□□ 0.22
COMMD4-208ENST00000563220 COPS4Q9BT78 406 aa16.42■□□□□ 0.22
COMMD4-208ENST00000563220 TMEM43Q9BTV4 400 aa16.42■□□□□ 0.22
COMMD4-208ENST00000563220 B3GNT4Q9C0J1 378 aa16.42■□□□□ 0.22
COMMD4-208ENST00000563220 C12orf10Q9HB07 376 aa16.42■□□□□ 0.22
COMMD4-208ENST00000563220 MCCC2Q9HCC0 563 aa16.42■□□□□ 0.22
COMMD4-208ENST00000563220 CCNB1IP1Q9NPC3 277 aa16.42■□□□□ 0.22
COMMD4-208ENST00000563220 KLRF1Q9NZS2 232 aa16.42■□□□□ 0.22
COMMD4-208ENST00000563220 MED11Q9P086 117 aa16.42■□□□□ 0.22
COMMD4-208ENST00000563220 GPR52Q9Y2T5 361 aa16.42■□□□□ 0.22
COMMD4-208ENST00000563220 STMND1H3BQB6 276 aa16.42■□□□□ 0.22
COMMD4-208ENST00000563220 BHLHE40O14503 412 aa16.42■□□□□ 0.22
COMMD4-208ENST00000563220 SURF4O15260 269 aa16.42■□□□□ 0.22
COMMD4-208ENST00000563220 CDC40O60508 579 aaKnown RBP eCLIP16.42■□□□□ 0.22
COMMD4-208ENST00000563220 HCN1O60741 890 aa16.42■□□□□ 0.22
COMMD4-208ENST00000563220 SLC2A10O95528 541 aa16.42■□□□□ 0.22
COMMD4-208ENST00000563220 GP1BBP13224 206 aa16.42■□□□□ 0.22
COMMD4-208ENST00000563220 BMP7P18075 431 aa16.42■□□□□ 0.22
COMMD4-208ENST00000563220 CCNA2P20248 432 aa16.42■□□□□ 0.22
COMMD4-208ENST00000563220 C21orf33P30042 268 aaPredicted RBP16.42■□□□□ 0.22
COMMD4-208ENST00000563220 MAP2K4P45985 399 aa16.42■□□□□ 0.22
COMMD4-208ENST00000563220 MLF1P58340 268 aa16.42■□□□□ 0.22
COMMD4-208ENST00000563220 GABREP78334 506 aa16.42■□□□□ 0.22
COMMD4-208ENST00000563220 IL20RBQ6UXL0 311 aa16.42■□□□□ 0.22
COMMD4-208ENST00000563220 ASCL5Q7RTU5 278 aa16.42■□□□□ 0.22
COMMD4-208ENST00000563220 PRSS48Q7RTY5 328 aa16.42■□□□□ 0.22
COMMD4-208ENST00000563220 TMEM163Q8TC26 289 aa16.42■□□□□ 0.22
COMMD4-208ENST00000563220 NACC2Q96BF6 587 aa16.42■□□□□ 0.22
COMMD4-208ENST00000563220 LRR1Q96L50 414 aa16.42■□□□□ 0.22
COMMD4-208ENST00000563220 Q96MT0 163 aa16.42■□□□□ 0.22
COMMD4-208ENST00000563220 SLC38A2Q96QD8 506 aa16.42■□□□□ 0.22
COMMD4-208ENST00000563220 TAS2R10Q9NYW0 307 aa16.42■□□□□ 0.22
COMMD4-208ENST00000563220 PCDHGB1Q9Y5G3 927 aa16.42■□□□□ 0.22
COMMD4-208ENST00000563220 CHCHD2Q9Y6H1 151 aaPredicted RBP16.42■□□□□ 0.22
COMMD4-208ENST00000563220 PCSK5Q92824 1860 aa16.41■□□□□ 0.22
COMMD4-208ENST00000563220 ICAM2P13598 275 aa16.41■□□□□ 0.22
COMMD4-208ENST00000563220 CASP3P42574 277 aa16.41■□□□□ 0.22
COMMD4-208ENST00000563220 SLC15A1P46059 708 aa16.41■□□□□ 0.22
COMMD4-208ENST00000563220 MASP1P48740 699 aa16.41■□□□□ 0.22
COMMD4-208ENST00000563220 RAB39AQ14964 217 aa16.41■□□□□ 0.22
COMMD4-208ENST00000563220 SYT14P1Q58G82 188 aa16.41■□□□□ 0.22
COMMD4-208ENST00000563220 POMZP3Q6PJE2 187 aa16.41■□□□□ 0.22
COMMD4-208ENST00000563220 ARMC10Q8N2F6 343 aa16.41■□□□□ 0.22
COMMD4-208ENST00000563220 OR52L1Q8NGH7 329 aa16.41■□□□□ 0.22
COMMD4-208ENST00000563220 ZNF420Q8TAQ5 688 aaPredicted RBP16.41■□□□□ 0.22
COMMD4-208ENST00000563220 METTL7AQ9H8H3 244 aa16.41■□□□□ 0.22
COMMD4-208ENST00000563220 IL17BQ9UHF5 180 aa16.41■□□□□ 0.22
COMMD4-208ENST00000563220 RIF1Q5UIP0 2472 aaKnown RBP16.41■□□□□ 0.22
COMMD4-208ENST00000563220 ZNF292O60281 2723 aa16.41■□□□□ 0.22
COMMD4-208ENST00000563220 ANKRD33BA6NCL7 494 aa16.4■□□□□ 0.22
COMMD4-208ENST00000563220 ANKUB1A6NFN9 424 aa16.4■□□□□ 0.22
COMMD4-208ENST00000563220 MRPS14O60783 128 aaKnown RBP16.4■□□□□ 0.22
COMMD4-208ENST00000563220 OR7A10O76100 309 aa16.4■□□□□ 0.22
COMMD4-208ENST00000563220 CDK1P06493 297 aa16.4■□□□□ 0.22
COMMD4-208ENST00000563220 STSP08842 583 aa16.4■□□□□ 0.22
COMMD4-208ENST00000563220 ADRA2AP08913 450 aa16.4■□□□□ 0.22
COMMD4-208ENST00000563220 LTBQ06643 244 aa16.4■□□□□ 0.22
COMMD4-208ENST00000563220 INPP5JQ15735 1006 aaPredicted RBP16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms