RNA–Protein interactions for RNA: ENST00000563207.1

USB1-208, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 5

Gene USB1, Length 464 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-208ENST00000563207 MED17Q9NVC6 651 aa14.08□□□□□ -0.16
USB1-208ENST00000563207 KLHL28Q9NXS3 571 aa14.08□□□□□ -0.16
USB1-208ENST00000563207 ADA2Q9NZK5 511 aa14.08□□□□□ -0.16
USB1-208ENST00000563207 CLCF1Q9UBD9 225 aa14.08□□□□□ -0.16
USB1-208ENST00000563207 ST6GALNAC2Q9UJ37 374 aa14.08□□□□□ -0.16
USB1-208ENST00000563207 A0A1W2PPR1 153 aa14.07□□□□□ -0.16
USB1-208ENST00000563207 CFAP73A6NFT4 308 aa14.07□□□□□ -0.16
USB1-208ENST00000563207 CLDN24A6NM45 220 aa14.07□□□□□ -0.16
USB1-208ENST00000563207 OIP5O43482 229 aa14.07□□□□□ -0.16
USB1-208ENST00000563207 GCM2O75603 506 aaPredicted RBP14.07□□□□□ -0.16
USB1-208ENST00000563207 ATP5HO75947 161 aa14.07□□□□□ -0.16
USB1-208ENST00000563207 UBOX5O94941 541 aa14.07□□□□□ -0.16
USB1-208ENST00000563207 HSD17B1P14061 328 aa14.07□□□□□ -0.16
USB1-208ENST00000563207 AQP1P29972 269 aa14.07□□□□□ -0.16
USB1-208ENST00000563207 KDELR2P33947 212 aa14.07□□□□□ -0.16
USB1-208ENST00000563207 CCR4P51679 360 aa14.07□□□□□ -0.16
USB1-208ENST00000563207 POU4F3Q15319 338 aa14.07□□□□□ -0.16
USB1-208ENST00000563207 SF3B4Q15427 424 aaKnown RBP eCLIP14.07□□□□□ -0.164e-17■■■■■ 82.4
USB1-208ENST00000563207 TMEM44Q2T9K0 475 aa14.07□□□□□ -0.16
USB1-208ENST00000563207 SLC25A53Q5H9E4 307 aa14.07□□□□□ -0.16
USB1-208ENST00000563207 RAET1LQ5VY80 246 aa14.07□□□□□ -0.16
USB1-208ENST00000563207 HMGN2P46Q86SG4 172 aa14.07□□□□□ -0.16
USB1-208ENST00000563207 DEFB107AQ8IZN7 70 aa14.07□□□□□ -0.16
USB1-208ENST00000563207 RBM15BQ8NDT2 890 aaKnown RBP14.07□□□□□ -0.16
USB1-208ENST00000563207 CNOT9Q92600 299 aaKnown RBP14.07□□□□□ -0.16
USB1-208ENST00000563207 MRGPRX4Q96LA9 322 aa14.07□□□□□ -0.16
USB1-208ENST00000563207 SFXN2Q96NB2 322 aa14.07□□□□□ -0.16
USB1-208ENST00000563207 CDRT15Q96T59 188 aa14.07□□□□□ -0.16
USB1-208ENST00000563207 SLC13A4Q9UKG4 626 aa14.07□□□□□ -0.16
USB1-208ENST00000563207 VDAC3Q9Y277 283 aa14.07□□□□□ -0.16
USB1-208ENST00000563207 AP4B1Q9Y6B7 739 aa14.07□□□□□ -0.16
USB1-208ENST00000563207 TNFSF12-TNFSF13A0A0A6YY99 330 aa14.06□□□□□ -0.16
USB1-208ENST00000563207 OR2M5A3KFT3 312 aa14.06□□□□□ -0.16
USB1-208ENST00000563207 TUBAL3A6NHL2 446 aa14.06□□□□□ -0.16
USB1-208ENST00000563207 GSTA4O15217 222 aa14.06□□□□□ -0.16
USB1-208ENST00000563207 GMFGO60234 142 aa14.06□□□□□ -0.16
USB1-208ENST00000563207 GMNNO75496 209 aa14.06□□□□□ -0.16
USB1-208ENST00000563207 RCBTB2O95199 551 aa14.06□□□□□ -0.16
USB1-208ENST00000563207 PEPDP12955 493 aa14.06□□□□□ -0.16
USB1-208ENST00000563207 FKBP2P26885 142 aaKnown RBP14.06□□□□□ -0.16
USB1-208ENST00000563207 ELK4P28324 431 aa14.06□□□□□ -0.16
USB1-208ENST00000563207 RASSF2P50749 326 aa14.06□□□□□ -0.16
USB1-208ENST00000563207 SUCLG1P53597 346 aaKnown RBP14.06□□□□□ -0.16
USB1-208ENST00000563207 RIPPLY3P57055 190 aa14.06□□□□□ -0.16
USB1-208ENST00000563207 NDUFAF6Q330K2 333 aa14.06□□□□□ -0.16
USB1-208ENST00000563207 UBQLNLQ8IYU4 475 aa14.06□□□□□ -0.16
USB1-208ENST00000563207 CLIP4Q8N3C7 705 aa14.06□□□□□ -0.16
USB1-208ENST00000563207 FBXO27Q8NI29 283 aa14.06□□□□□ -0.16
USB1-208ENST00000563207 FAM222BQ8WU58 562 aa14.06□□□□□ -0.16
USB1-208ENST00000563207 SLC24A3Q9HC58 644 aa14.06□□□□□ -0.16
USB1-208ENST00000563207 ACER3Q9NUN7 267 aa14.06□□□□□ -0.16
USB1-208ENST00000563207 RLIMQ9NVW2 624 aa14.06□□□□□ -0.16
USB1-208ENST00000563207 GALNT8Q9NY28 637 aa14.06□□□□□ -0.16
USB1-208ENST00000563207 CD300AQ9UGN4 299 aa14.06□□□□□ -0.16
USB1-208ENST00000563207 BAG5Q9UL15 447 aa14.06□□□□□ -0.16
USB1-208ENST00000563207 PRPF19Q9UMS4 504 aaKnown RBP14.06□□□□□ -0.16
USB1-208ENST00000563207 CHST2Q9Y4C5 530 aa14.06□□□□□ -0.16
USB1-208ENST00000563207 ZFHX3Q15911 3703 aa14.05□□□□□ -0.16
USB1-208ENST00000563207 SHISA8B8ZZ34 492 aa14.05□□□□□ -0.16
USB1-208ENST00000563207 CXCR6O00574 342 aa14.05□□□□□ -0.16
USB1-208ENST00000563207 NTN1O95631 604 aa14.05□□□□□ -0.16
USB1-208ENST00000563207 EPXP11678 715 aa14.05□□□□□ -0.16
USB1-208ENST00000563207 ZNF708P17019 499 aa14.05□□□□□ -0.16
USB1-208ENST00000563207 PRKCAP17252 672 aa14.05□□□□□ -0.16
USB1-208ENST00000563207 OPRM1P35372 400 aa14.05□□□□□ -0.16
USB1-208ENST00000563207 HTR3AP46098 478 aa14.05□□□□□ -0.16
USB1-208ENST00000563207 KCNJ5P48544 419 aa14.05□□□□□ -0.16
USB1-208ENST00000563207 RNF144AP50876 292 aaPredicted RBP14.05□□□□□ -0.16
USB1-208ENST00000563207 MAP2K6P52564 334 aa14.05□□□□□ -0.16
USB1-208ENST00000563207 COPZ1P61923 177 aa14.05□□□□□ -0.16
USB1-208ENST00000563207 PLAURQ03405 335 aa14.05□□□□□ -0.16
USB1-208ENST00000563207 DMTNQ08495 405 aa14.05□□□□□ -0.16
USB1-208ENST00000563207 EPS8Q12929 822 aa14.05□□□□□ -0.16
USB1-208ENST00000563207 BNIP1Q12981 228 aa14.05□□□□□ -0.16
USB1-208ENST00000563207 DAZAP2Q15038 168 aaPredicted RBP14.05□□□□□ -0.16
USB1-208ENST00000563207 QPRTQ15274 297 aa14.05□□□□□ -0.16
USB1-208ENST00000563207 FXNQ16595 210 aa14.05□□□□□ -0.16
USB1-208ENST00000563207 DNAL1Q4LDG9 190 aa14.05□□□□□ -0.16
USB1-208ENST00000563207 C6orf89Q6UWU4 347 aa14.05□□□□□ -0.16
USB1-208ENST00000563207 ZNF563Q8TA94 476 aa14.05□□□□□ -0.16
USB1-208ENST00000563207 RNF145Q96MT1 663 aa14.05□□□□□ -0.16
USB1-208ENST00000563207 TMUB1Q9BVT8 246 aa14.05□□□□□ -0.16
USB1-208ENST00000563207 RBM24Q9BX46 236 aaKnown RBP14.05□□□□□ -0.16
USB1-208ENST00000563207 CXXC4Q9H2H0 198 aa14.05□□□□□ -0.16
USB1-208ENST00000563207 TAS2R1Q9NYW7 299 aa14.05□□□□□ -0.16
USB1-208ENST00000563207 ANKHD1Q8IWZ3 2542 aaKnown RBP14.05□□□□□ -0.16
USB1-208ENST00000563207 BCAS1O75363 584 aaPredicted RBP14.04□□□□□ -0.16
USB1-208ENST00000563207 TNFSF13O75888 250 aa14.04□□□□□ -0.16
USB1-208ENST00000563207 LGI1O95970 557 aa14.04□□□□□ -0.16
USB1-208ENST00000563207 IL18BPO95998 194 aa14.04□□□□□ -0.16
USB1-208ENST00000563207 PSMA4P25789 261 aaKnown RBP14.04□□□□□ -0.16
USB1-208ENST00000563207 RYKP34925 604 aa14.04□□□□□ -0.16
USB1-208ENST00000563207 APOBEC1P41238 236 aaKnown RBP14.04□□□□□ -0.16
USB1-208ENST00000563207 ACAA2P42765 397 aaKnown RBP14.04□□□□□ -0.16
USB1-208ENST00000563207 SLC1A3P43003 542 aa14.04□□□□□ -0.16
USB1-208ENST00000563207 IDH2P48735 452 aaKnown RBP14.04□□□□□ -0.16
USB1-208ENST00000563207 SESN3P58005 492 aa14.04□□□□□ -0.16
USB1-208ENST00000563207 RAC1P63000 192 aa14.04□□□□□ -0.16
USB1-208ENST00000563207 CBX1P83916 185 aa14.04□□□□□ -0.16
USB1-208ENST00000563207 DUSP7Q16829 419 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms