RNA–Protein interactions for RNA: ENST00000563149.1

USB1-207, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,751 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-207ENST00000563149 LDB3O75112 727 aa12.06□□□□□ -0.48
USB1-207ENST00000563149 NDUFB2O95178 105 aa12.06□□□□□ -0.48
USB1-207ENST00000563149 CLUP10909 449 aa12.06□□□□□ -0.48
USB1-207ENST00000563149 TYRP1P17643 537 aa12.06□□□□□ -0.48
USB1-207ENST00000563149 NTSR1P30989 418 aa12.06□□□□□ -0.48
USB1-207ENST00000563149 HOXD11P31277 338 aaPredicted RBP12.06□□□□□ -0.48
USB1-207ENST00000563149 ACTR1BP42025 376 aa12.06□□□□□ -0.48
USB1-207ENST00000563149 ACTR1AP61163 376 aa12.06□□□□□ -0.48
USB1-207ENST00000563149 ARF3P61204 181 aaPredicted RBP12.06□□□□□ -0.48
USB1-207ENST00000563149 SIRPAP78324 504 aa12.06□□□□□ -0.48
USB1-207ENST00000563149 PLAURQ03405 335 aa12.06□□□□□ -0.48
USB1-207ENST00000563149 HSF2Q03933 536 aa12.06□□□□□ -0.48
USB1-207ENST00000563149 CEP78Q5JTW2 689 aa12.06□□□□□ -0.48
USB1-207ENST00000563149 SLC35D3Q5M8T2 416 aa12.06□□□□□ -0.48
USB1-207ENST00000563149 ZBTB37Q5TC79 503 aa12.06□□□□□ -0.48
USB1-207ENST00000563149 FGD2Q7Z6J4 655 aa12.06□□□□□ -0.48
USB1-207ENST00000563149 CYB561A3Q8NBI2 242 aa12.06□□□□□ -0.48
USB1-207ENST00000563149 OR5H6Q8NGV6 325 aa12.06□□□□□ -0.48
USB1-207ENST00000563149 HSD17B8Q92506 261 aa12.06□□□□□ -0.48
USB1-207ENST00000563149 CNOT9Q92600 299 aaKnown RBP12.06□□□□□ -0.48
USB1-207ENST00000563149 HGDQ93099 445 aa12.06□□□□□ -0.48
USB1-207ENST00000563149 MARVELD3Q96A59 401 aa12.06□□□□□ -0.48
USB1-207ENST00000563149 ERMAPQ96PL5 475 aaPredicted RBP12.06□□□□□ -0.48
USB1-207ENST00000563149 CNN2Q99439 309 aaKnown RBP12.06□□□□□ -0.48
USB1-207ENST00000563149 GABRG3Q99928 467 aa12.06□□□□□ -0.48
USB1-207ENST00000563149 LMF2Q9BU23 707 aaKnown RBP12.06□□□□□ -0.48
USB1-207ENST00000563149 MKRN2Q9H000 416 aaKnown RBP12.06□□□□□ -0.48
USB1-207ENST00000563149 DZANK1Q9NVP4 752 aa12.06□□□□□ -0.48
USB1-207ENST00000563149 UCKL1Q9NWZ5 548 aa12.06□□□□□ -0.48
USB1-207ENST00000563149 CHRNA9Q9UGM1 479 aa12.06□□□□□ -0.48
USB1-207ENST00000563149 ELF5Q9UKW6 265 aaPredicted RBP12.06□□□□□ -0.48
USB1-207ENST00000563149 COL4A2P08572 1712 aa12.06□□□□□ -0.48
USB1-207ENST00000563149 TRAV6A0A075B6T7 132 aa12.05□□□□□ -0.48
USB1-207ENST00000563149 A0A1W2PRG6 482 aa12.05□□□□□ -0.48
USB1-207ENST00000563149 POM121BA6NF01 834 aa12.05□□□□□ -0.48
USB1-207ENST00000563149 ZNF879B4DU55 563 aa12.05□□□□□ -0.48
USB1-207ENST00000563149 K7EQS6 105 aa12.05□□□□□ -0.48
USB1-207ENST00000563149 PDCD5O14737 125 aa12.05□□□□□ -0.48
USB1-207ENST00000563149 H2AFB2P0C5Z0 115 aa12.05□□□□□ -0.48
USB1-207ENST00000563149 SLC35E2P0CK97 266 aa12.05□□□□□ -0.48
USB1-207ENST00000563149 ATF1P18846 271 aa12.05□□□□□ -0.48
USB1-207ENST00000563149 POLR2CP19387 275 aaPredicted RBP12.05□□□□□ -0.48
USB1-207ENST00000563149 ACAA2P42765 397 aaKnown RBP12.05□□□□□ -0.48
USB1-207ENST00000563149 SRP9P49458 86 aaKnown RBP12.05□□□□□ -0.48
USB1-207ENST00000563149 GPR143P51810 404 aa12.05□□□□□ -0.48
USB1-207ENST00000563149 RAB38P57729 211 aa12.05□□□□□ -0.48
USB1-207ENST00000563149 ID2Q02363 134 aa12.05□□□□□ -0.48
USB1-207ENST00000563149 ILF3Q12906 894 aaKnown RBP eCLIP12.05□□□□□ -0.48
USB1-207ENST00000563149 FHL1Q13642 323 aa12.05□□□□□ -0.48
USB1-207ENST00000563149 COL9A2Q14055 689 aaPredicted RBP12.05□□□□□ -0.48
USB1-207ENST00000563149 ISXQ2M1V0 245 aa12.05□□□□□ -0.48
USB1-207ENST00000563149 COL28A1Q2UY09 1125 aa12.05□□□□□ -0.48
USB1-207ENST00000563149 ESCO2Q56NI9 601 aa12.05□□□□□ -0.48
USB1-207ENST00000563149 ALG10BQ5I7T1 473 aa12.05□□□□□ -0.48
USB1-207ENST00000563149 UBE2NLQ5JXB2 153 aa12.05□□□□□ -0.48
USB1-207ENST00000563149 FAM69AQ5T7M9 428 aa12.05□□□□□ -0.48
USB1-207ENST00000563149 RPTNQ6XPR3 784 aa12.05□□□□□ -0.48
USB1-207ENST00000563149 RNF44Q7L0R7 432 aa12.05□□□□□ -0.48
USB1-207ENST00000563149 SSX6Q7RTT6 188 aa12.05□□□□□ -0.48
USB1-207ENST00000563149 SIAH3Q8IW03 269 aa12.05□□□□□ -0.48
USB1-207ENST00000563149 SLC35F2Q8IXU6 374 aa12.05□□□□□ -0.48
USB1-207ENST00000563149 CA13Q8N1Q1 262 aa12.05□□□□□ -0.48
USB1-207ENST00000563149 OR11H7Q8NGC8 314 aa12.05□□□□□ -0.48
USB1-207ENST00000563149 GRHL3Q8TE85 626 aa12.05□□□□□ -0.48
USB1-207ENST00000563149 PELI1Q96FA3 418 aa12.05□□□□□ -0.48
USB1-207ENST00000563149 PEX11GQ96HA9 241 aa12.05□□□□□ -0.48
USB1-207ENST00000563149 RADILQ96JH8 1075 aa12.05□□□□□ -0.48
USB1-207ENST00000563149 MRI1Q9BV20 369 aa12.05□□□□□ -0.48
USB1-207ENST00000563149 PLEKHA1Q9HB21 404 aa12.05□□□□□ -0.48
USB1-207ENST00000563149 ZFP64Q9NPA5 681 aa12.05□□□□□ -0.48
USB1-207ENST00000563149 NRIP3Q9NQ35 241 aa12.05□□□□□ -0.48
USB1-207ENST00000563149 SLCO1C1Q9NYB5 712 aa12.05□□□□□ -0.48
USB1-207ENST00000563149 ZNF222Q9UK12 451 aa12.05□□□□□ -0.48
USB1-207ENST00000563149 MGAT4AQ9UM21 535 aa12.05□□□□□ -0.48
USB1-207ENST00000563149 LOC105369274A0A096LPK9 316 aa12.05□□□□□ -0.48
USB1-207ENST00000563149 NAP1L6A6NFF2 107 aa12.05□□□□□ -0.48
USB1-207ENST00000563149 C2orf74A8MZ97 194 aa12.05□□□□□ -0.48
USB1-207ENST00000563149 GALR3O60755 368 aaPredicted RBP12.05□□□□□ -0.48
USB1-207ENST00000563149 PPM1BO75688 479 aa12.05□□□□□ -0.48
USB1-207ENST00000563149 ECDO95905 644 aaPredicted RBP12.05□□□□□ -0.48
USB1-207ENST00000563149 TPOP07202 933 aa12.05□□□□□ -0.48
USB1-207ENST00000563149 CT62P0C5K7 136 aa12.05□□□□□ -0.48
USB1-207ENST00000563149 PSMD4P55036 377 aaKnown RBP12.05□□□□□ -0.48
USB1-207ENST00000563149 PER3P56645 1201 aa12.05□□□□□ -0.48
USB1-207ENST00000563149 EXOSC7Q15024 291 aaKnown RBP12.05□□□□□ -0.48
USB1-207ENST00000563149 ZNHIT3Q15649 155 aaPredicted RBP12.05□□□□□ -0.48
USB1-207ENST00000563149 GSG1Q2KHT4 349 aa12.05□□□□□ -0.48
USB1-207ENST00000563149 TP53I3Q53FA7 332 aa12.05□□□□□ -0.48
USB1-207ENST00000563149 FCRLBQ6BAA4 426 aa12.05□□□□□ -0.48
USB1-207ENST00000563149 ULK3Q6PHR2 472 aa12.05□□□□□ -0.48
USB1-207ENST00000563149 UBE2Q1Q7Z7E8 422 aa12.05□□□□□ -0.48
USB1-207ENST00000563149 OR4N4Q8N0Y3 316 aa12.05□□□□□ -0.48
USB1-207ENST00000563149 EID2Q8N6I1 236 aa12.05□□□□□ -0.48
USB1-207ENST00000563149 FAM98AQ8NCA5 519 aaKnown RBP12.05□□□□□ -0.48
USB1-207ENST00000563149 TMEM52Q8NDY8 209 aa12.05□□□□□ -0.48
USB1-207ENST00000563149 OR8H1Q8NGG4 311 aa12.05□□□□□ -0.48
USB1-207ENST00000563149 OR52E2Q8NGJ4 325 aa12.05□□□□□ -0.48
USB1-207ENST00000563149 OR56B4Q8NH76 319 aa12.05□□□□□ -0.48
USB1-207ENST00000563149 OR14A16Q8NHC5 309 aa12.05□□□□□ -0.48
USB1-207ENST00000563149 BAHD1Q8TBE0 780 aaPredicted RBP12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms