RNA–Protein interactions for RNA: ENST00000561960.5

NSMCE1-202, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 3

Gene NSMCE1, Length 609 nt, Biotype retained intron, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-202ENST00000561960 MRPL33O75394 65 aaKnown RBP10.2□□□□□ -0.78
NSMCE1-202ENST00000561960 CSTAP01040 98 aa10.2□□□□□ -0.78
NSMCE1-202ENST00000561960 CFPP27918 469 aa10.2□□□□□ -0.78
NSMCE1-202ENST00000561960 APOBEC3AP31941 199 aaPredicted RBP10.2□□□□□ -0.78
NSMCE1-202ENST00000561960 HPCAL1P37235 193 aa10.2□□□□□ -0.78
NSMCE1-202ENST00000561960 SUMO3P55854 103 aaPredicted RBP10.2□□□□□ -0.78
NSMCE1-202ENST00000561960 ETF1P62495 437 aaKnown RBP10.2□□□□□ -0.78
NSMCE1-202ENST00000561960 PHC1P78364 1004 aa10.2□□□□□ -0.78
NSMCE1-202ENST00000561960 CHRNB3Q05901 458 aa10.2□□□□□ -0.78
NSMCE1-202ENST00000561960 TSPO2Q5TGU0 170 aa10.2□□□□□ -0.78
NSMCE1-202ENST00000561960 C10orf107Q8IVU9 208 aa10.2□□□□□ -0.78
NSMCE1-202ENST00000561960 CLECL1Q8IZS7 167 aa10.2□□□□□ -0.78
NSMCE1-202ENST00000561960 ZNF563Q8TA94 476 aa10.2□□□□□ -0.78
NSMCE1-202ENST00000561960 RAB8BQ92930 207 aa10.2□□□□□ -0.78
NSMCE1-202ENST00000561960 FCRL1Q96LA6 429 aa10.2□□□□□ -0.78
NSMCE1-202ENST00000561960 STACQ99469 402 aa10.2□□□□□ -0.78
NSMCE1-202ENST00000561960 SDF2Q99470 211 aa10.2□□□□□ -0.78
NSMCE1-202ENST00000561960 OCEL1Q9H607 264 aa10.2□□□□□ -0.78
NSMCE1-202ENST00000561960 SLC17A5Q9NRA2 495 aa10.2□□□□□ -0.78
NSMCE1-202ENST00000561960 EMC3Q9P0I2 261 aa10.2□□□□□ -0.78
NSMCE1-202ENST00000561960 UPB1Q9UBR1 384 aa10.2□□□□□ -0.78
NSMCE1-202ENST00000561960 IGHV1-18A0A0C4DH31 117 aa10.19□□□□□ -0.78
NSMCE1-202ENST00000561960 RIPK2O43353 540 aa10.19□□□□□ -0.78
NSMCE1-202ENST00000561960 TCF21O43680 179 aa10.19□□□□□ -0.78
NSMCE1-202ENST00000561960 PLIN3O60664 434 aa10.19□□□□□ -0.78
NSMCE1-202ENST00000561960 VENTXO95231 258 aa10.19□□□□□ -0.78
NSMCE1-202ENST00000561960 SHBGP04278 402 aa10.19□□□□□ -0.78
NSMCE1-202ENST00000561960 CKAP4Q07065 602 aaKnown RBP10.19□□□□□ -0.78
NSMCE1-202ENST00000561960 SWI5Q1ZZU3 235 aa10.19□□□□□ -0.78
NSMCE1-202ENST00000561960 PGS1Q32NB8 556 aa10.19□□□□□ -0.78
NSMCE1-202ENST00000561960 SLC25A53Q5H9E4 307 aa10.19□□□□□ -0.78
NSMCE1-202ENST00000561960 ZNF544Q6NX49 715 aa10.19□□□□□ -0.78
NSMCE1-202ENST00000561960 C12orf54Q6X4T0 127 aa10.19□□□□□ -0.78
NSMCE1-202ENST00000561960 ZCCHC23Q6ZST2 131 aa10.19□□□□□ -0.78
NSMCE1-202ENST00000561960 MTDHQ86UE4 582 aaKnown RBP10.19□□□□□ -0.78
NSMCE1-202ENST00000561960 MYPOPQ86VE0 399 aaPredicted RBP10.19□□□□□ -0.78
NSMCE1-202ENST00000561960 P2RY8Q86VZ1 359 aa10.19□□□□□ -0.78
NSMCE1-202ENST00000561960 C4orf33Q8N1A6 199 aa10.19□□□□□ -0.78
NSMCE1-202ENST00000561960 TWIST2Q8WVJ9 160 aa10.19□□□□□ -0.78
NSMCE1-202ENST00000561960 PPP1R36Q96LQ0 422 aa10.19□□□□□ -0.78
NSMCE1-202ENST00000561960 C3orf30Q96M34 536 aa10.19□□□□□ -0.78
NSMCE1-202ENST00000561960 C16orf45Q96MC5 204 aaPredicted RBP10.19□□□□□ -0.78
NSMCE1-202ENST00000561960 MECRQ9BV79 373 aa10.19□□□□□ -0.78
NSMCE1-202ENST00000561960 FKRPQ9H9S5 495 aa10.19□□□□□ -0.78
NSMCE1-202ENST00000561960 SERINC1Q9NRX5 453 aa10.19□□□□□ -0.78
NSMCE1-202ENST00000561960 PSMC3IPQ9P2W1 217 aaPredicted RBP10.19□□□□□ -0.78
NSMCE1-202ENST00000561960 DNAJC15Q9Y5T4 150 aa10.19□□□□□ -0.78
NSMCE1-202ENST00000561960 FKBP7Q9Y680 259 aa10.19□□□□□ -0.78
NSMCE1-202ENST00000561960 IGKV3D-15A0A087WSY6 115 aa10.18□□□□□ -0.78
NSMCE1-202ENST00000561960 A0A096LPE4 126 aa10.18□□□□□ -0.78
NSMCE1-202ENST00000561960 A0A1W2PPZ6 126 aa10.18□□□□□ -0.78
NSMCE1-202ENST00000561960 ZC3H12DA2A288 527 aaKnown RBP10.18□□□□□ -0.78
NSMCE1-202ENST00000561960 SPRY1O43609 319 aaPredicted RBP10.18□□□□□ -0.78
NSMCE1-202ENST00000561960 GLRA3O75311 464 aa10.18□□□□□ -0.78
NSMCE1-202ENST00000561960 UGT2B17O75795 530 aa10.18□□□□□ -0.78
NSMCE1-202ENST00000561960 PGRP06401 933 aa10.18□□□□□ -0.78
NSMCE1-202ENST00000561960 CELA3BP08861 270 aa10.18□□□□□ -0.78
NSMCE1-202ENST00000561960 IFI6P09912 130 aa10.18□□□□□ -0.78
NSMCE1-202ENST00000561960 CSF3P09919 207 aa10.18□□□□□ -0.78
NSMCE1-202ENST00000561960 IMPDH2P12268 514 aa10.18□□□□□ -0.78
NSMCE1-202ENST00000561960 CPA3P15088 417 aa10.18□□□□□ -0.78
NSMCE1-202ENST00000561960 ZNF23P17027 643 aa10.18□□□□□ -0.78
NSMCE1-202ENST00000561960 MATN1P21941 496 aa10.18□□□□□ -0.78
NSMCE1-202ENST00000561960 PRPH2P23942 346 aa10.18□□□□□ -0.78
NSMCE1-202ENST00000561960 APEX1P27695 318 aaKnown RBP10.18□□□□□ -0.78
NSMCE1-202ENST00000561960 LCN1P31025 176 aa10.18□□□□□ -0.78
NSMCE1-202ENST00000561960 SNRPD2P62316 118 aaKnown RBP10.18□□□□□ -0.78
NSMCE1-202ENST00000561960 CSNK2A1P68400 391 aaPredicted RBP10.18□□□□□ -0.78
NSMCE1-202ENST00000561960 HBA1P69905 142 aa10.18□□□□□ -0.78
NSMCE1-202ENST00000561960 PLAURQ03405 335 aa10.18□□□□□ -0.78
NSMCE1-202ENST00000561960 LIPNQ5VXI9 398 aa10.18□□□□□ -0.78
NSMCE1-202ENST00000561960 KANK2Q63ZY3 851 aa10.18□□□□□ -0.78
NSMCE1-202ENST00000561960 TNFAIP8L2Q6P589 184 aaPredicted RBP10.18□□□□□ -0.78
NSMCE1-202ENST00000561960 ZCCHC12Q6PEW1 402 aa10.18□□□□□ -0.78
NSMCE1-202ENST00000561960 ANKRD46Q86W74 232 aa10.18□□□□□ -0.78
NSMCE1-202ENST00000561960 OR56A1Q8NGH5 318 aa10.18□□□□□ -0.78
NSMCE1-202ENST00000561960 ZG16BQ96DA0 208 aa10.18□□□□□ -0.78
NSMCE1-202ENST00000561960 MUS81Q96NY9 551 aa10.18□□□□□ -0.78
NSMCE1-202ENST00000561960 USB1Q9BQ65 265 aaKnown RBP10.18□□□□□ -0.78
NSMCE1-202ENST00000561960 CCDC106Q9BWC9 280 aa10.18□□□□□ -0.78
NSMCE1-202ENST00000561960 GATA5Q9BWX5 397 aaPredicted RBP10.18□□□□□ -0.78
NSMCE1-202ENST00000561960 LAT2Q9GZY6 243 aa10.18□□□□□ -0.78
NSMCE1-202ENST00000561960 HOXD1Q9GZZ0 328 aa10.18□□□□□ -0.78
NSMCE1-202ENST00000561960 IQCGQ9H095 443 aaKnown RBP10.18□□□□□ -0.78
NSMCE1-202ENST00000561960 OR51I1Q9H343 314 aa10.18□□□□□ -0.78
NSMCE1-202ENST00000561960 TPK1Q9H3S4 243 aa10.18□□□□□ -0.78
NSMCE1-202ENST00000561960 ACER3Q9NUN7 267 aa10.18□□□□□ -0.78
NSMCE1-202ENST00000561960 OXSMQ9NWU1 459 aa10.18□□□□□ -0.78
NSMCE1-202ENST00000561960 CHRNA9Q9UGM1 479 aa10.18□□□□□ -0.78
NSMCE1-202ENST00000561960 ATP6V1HQ9UI12 483 aa10.18□□□□□ -0.78
NSMCE1-202ENST00000561960 WBP11Q9Y2W2 641 aaKnown RBP10.18□□□□□ -0.78
NSMCE1-202ENST00000561960 MGAM2Q2M2H8 2515 aa10.18□□□□□ -0.78
NSMCE1-202ENST00000561960 RNF103-CHMP3A0A140T963 221 aa10.17□□□□□ -0.78
NSMCE1-202ENST00000561960 TMEM72A0PK05 275 aa10.17□□□□□ -0.78
NSMCE1-202ENST00000561960 EIF4E2O60573 245 aaKnown RBP10.17□□□□□ -0.78
NSMCE1-202ENST00000561960 TBX19O60806 448 aa10.17□□□□□ -0.78
NSMCE1-202ENST00000561960 LGI1O95970 557 aa10.17□□□□□ -0.78
NSMCE1-202ENST00000561960 OR4A8P0C604 315 aa10.17□□□□□ -0.78
NSMCE1-202ENST00000561960 OR12D1P0DN82 309 aa10.17□□□□□ -0.78
NSMCE1-202ENST00000561960 PGCP20142 388 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms