RNA–Protein interactions for RNA: ENST00000561326.5

USP3-219, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 543 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-219ENST00000561326 CCL11P51671 97 aa9.36□□□□□ -0.91
USP3-219ENST00000561326 SMSP52788 366 aa9.36□□□□□ -0.91
USP3-219ENST00000561326 DLX5P56178 289 aa9.36□□□□□ -0.91
USP3-219ENST00000561326 DSCR4P56555 118 aaPredicted RBP9.36□□□□□ -0.91
USP3-219ENST00000561326 IL5RAQ01344 420 aa9.36□□□□□ -0.91
USP3-219ENST00000561326 CRYZQ08257 329 aaKnown RBP9.36□□□□□ -0.91
USP3-219ENST00000561326 MFAP5Q13361 173 aa9.36□□□□□ -0.91
USP3-219ENST00000561326 TOP3AQ13472 1001 aaPredicted RBP9.36□□□□□ -0.91
USP3-219ENST00000561326 TUBA3CQ13748 450 aa9.36□□□□□ -0.91
USP3-219ENST00000561326 GINS1Q14691 196 aa9.36□□□□□ -0.91
USP3-219ENST00000561326 TOMM34Q15785 309 aaPredicted RBP9.36□□□□□ -0.91
USP3-219ENST00000561326 ANKDD1AQ495B1 522 aa9.36□□□□□ -0.91
USP3-219ENST00000561326 ZBED5Q49AG3 693 aa9.36□□□□□ -0.91
USP3-219ENST00000561326 SLC25A53Q5H9E4 307 aa9.36□□□□□ -0.91
USP3-219ENST00000561326 ATP1A1-AS1Q5TC04 95 aa9.36□□□□□ -0.91
USP3-219ENST00000561326 ZNF468Q5VIY5 522 aaPredicted RBP9.36□□□□□ -0.91
USP3-219ENST00000561326 TIGD3Q6B0B8 471 aa9.36□□□□□ -0.91
USP3-219ENST00000561326 TUBA3EQ6PEY2 450 aa9.36□□□□□ -0.91
USP3-219ENST00000561326 LINC00696Q6ZRV3 163 aa9.36□□□□□ -0.91
USP3-219ENST00000561326 MDGA2Q7Z553 956 aa9.36□□□□□ -0.91
USP3-219ENST00000561326 FADS6Q8N9I5 356 aa9.36□□□□□ -0.91
USP3-219ENST00000561326 WDSUB1Q8N9V3 476 aa9.36□□□□□ -0.91
USP3-219ENST00000561326 PSD4Q8NDX1 1056 aa9.36□□□□□ -0.91
USP3-219ENST00000561326 OR52L1Q8NGH7 329 aa9.36□□□□□ -0.91
USP3-219ENST00000561326 PFN4Q8NHR9 129 aa9.36□□□□□ -0.91
USP3-219ENST00000561326 SNIP1Q8TAD8 396 aaKnown RBP9.36□□□□□ -0.91
USP3-219ENST00000561326 STK35Q8TDR2 534 aa9.36□□□□□ -0.91
USP3-219ENST00000561326 TRUB1Q8WWH5 349 aaKnown RBP9.36□□□□□ -0.91
USP3-219ENST00000561326 ZBTB8AQ96BR9 441 aa9.36□□□□□ -0.91
USP3-219ENST00000561326 JSRP1Q96MG2 331 aaPredicted RBP9.36□□□□□ -0.91
USP3-219ENST00000561326 SLC38A2Q96QD8 506 aa9.36□□□□□ -0.91
USP3-219ENST00000561326 FAM173AQ9BQD7 235 aa9.36□□□□□ -0.91
USP3-219ENST00000561326 RNF32Q9H0A6 362 aa9.36□□□□□ -0.91
USP3-219ENST00000561326 MED17Q9NVC6 651 aa9.36□□□□□ -0.91
USP3-219ENST00000561326 ANKRD10Q9NXR5 420 aa9.36□□□□□ -0.91
USP3-219ENST00000561326 GPR83Q9NYM4 423 aa9.36□□□□□ -0.91
USP3-219ENST00000561326 IL20Q9NYY1 176 aa9.36□□□□□ -0.91
USP3-219ENST00000561326 BOKQ9UMX3 212 aaPredicted RBP9.36□□□□□ -0.91
USP3-219ENST00000561326 MYRFQ9Y2G1 1151 aa9.36□□□□□ -0.91
USP3-219ENST00000561326 ZNF337Q9Y3M9 751 aa9.36□□□□□ -0.91
USP3-219ENST00000561326 SPIN1Q9Y657 262 aaPredicted RBP9.36□□□□□ -0.91
USP3-219ENST00000561326 PIEZO1Q92508 2521 aa9.36□□□□□ -0.91
USP3-219ENST00000561326 NCKAP5O14513 1909 aa9.35□□□□□ -0.91
USP3-219ENST00000561326 TRAV36DV7A0A075B6V5 113 aa9.35□□□□□ -0.91
USP3-219ENST00000561326 OR5H15A6NDH6 313 aa9.35□□□□□ -0.91
USP3-219ENST00000561326 ENO4A6NNW6 628 aa9.35□□□□□ -0.91
USP3-219ENST00000561326 ADAM10O14672 748 aa9.35□□□□□ -0.91
USP3-219ENST00000561326 SNPHO15079 494 aa9.35□□□□□ -0.91
USP3-219ENST00000561326 RRP8O43159 456 aaKnown RBP9.35□□□□□ -0.91
USP3-219ENST00000561326 KLF4O43474 513 aa9.35□□□□□ -0.91
USP3-219ENST00000561326 SUSD5O60279 629 aa9.35□□□□□ -0.91
USP3-219ENST00000561326 SOX14O95416 240 aa9.35□□□□□ -0.91
USP3-219ENST00000561326 CLIC3O95833 236 aa9.35□□□□□ -0.91
USP3-219ENST00000561326 WDPCPO95876 746 aa9.35□□□□□ -0.91
USP3-219ENST00000561326 CH25HO95992 272 aa9.35□□□□□ -0.91
USP3-219ENST00000561326 MT-ATP6P00846 226 aa9.35□□□□□ -0.91
USP3-219ENST00000561326 CD46P15529 392 aa9.35□□□□□ -0.91
USP3-219ENST00000561326 FUT1P19526 365 aa9.35□□□□□ -0.91
USP3-219ENST00000561326 SPINK2P20155 84 aa9.35□□□□□ -0.91
USP3-219ENST00000561326 CCNA2P20248 432 aa9.35□□□□□ -0.91
USP3-219ENST00000561326 MAKP20794 623 aa9.35□□□□□ -0.91
USP3-219ENST00000561326 DPP4P27487 766 aa9.35□□□□□ -0.91
USP3-219ENST00000561326 EPHA2P29317 976 aa9.35□□□□□ -0.91
USP3-219ENST00000561326 ISL1P61371 349 aa9.35□□□□□ -0.91
USP3-219ENST00000561326 LSM11P83369 360 aaKnown RBP eCLIP9.35□□□□□ -0.91
USP3-219ENST00000561326 CDK5Q00535 292 aa9.35□□□□□ -0.91
USP3-219ENST00000561326 RAPSNQ13702 412 aa9.35□□□□□ -0.91
USP3-219ENST00000561326 MFSD13AQ14CX5 517 aa9.35□□□□□ -0.91
USP3-219ENST00000561326 OR1C1Q15619 314 aa9.35□□□□□ -0.91
USP3-219ENST00000561326 DEFB109BQ30KR1 87 aa9.35□□□□□ -0.91
USP3-219ENST00000561326 PLPPR5Q32ZL2 321 aa9.35□□□□□ -0.91
USP3-219ENST00000561326 GLYR1Q49A26 553 aaPredicted RBP9.35□□□□□ -0.91
USP3-219ENST00000561326 RBM48Q5RL73 367 aaKnown RBP9.35□□□□□ -0.91
USP3-219ENST00000561326 BROXQ5VW32 411 aa9.35□□□□□ -0.91
USP3-219ENST00000561326 SLX4IPQ5VYV7 408 aa9.35□□□□□ -0.91
USP3-219ENST00000561326 SLC27A4Q6P1M0 643 aa9.35□□□□□ -0.91
USP3-219ENST00000561326 POMZP3Q6PJE2 187 aa9.35□□□□□ -0.91
USP3-219ENST00000561326 SMARCD3Q6STE5 483 aa9.35□□□□□ -0.91
USP3-219ENST00000561326 UGT2A3Q6UWM9 527 aa9.35□□□□□ -0.91
USP3-219ENST00000561326 ARSKQ6UWY0 536 aa9.35□□□□□ -0.91
USP3-219ENST00000561326 PTCHD4Q6ZW05 846 aa9.35□□□□□ -0.91
USP3-219ENST00000561326 ADGRG3Q86Y34 549 aa9.35□□□□□ -0.91
USP3-219ENST00000561326 ZNF786Q8N393 782 aa9.35□□□□□ -0.91
USP3-219ENST00000561326 HAS2Q92819 552 aa9.35□□□□□ -0.91
USP3-219ENST00000561326 GATA6Q92908 595 aa9.35□□□□□ -0.91
USP3-219ENST00000561326 NTNG2Q96CW9 530 aa9.35□□□□□ -0.91
USP3-219ENST00000561326 DDIT4LQ96D03 193 aa9.35□□□□□ -0.91
USP3-219ENST00000561326 C1GALT1C1Q96EU7 318 aa9.35□□□□□ -0.91
USP3-219ENST00000561326 PLEKHA8Q96JA3 519 aa9.35□□□□□ -0.91
USP3-219ENST00000561326 Q96MT0 163 aa9.35□□□□□ -0.91
USP3-219ENST00000561326 GNRHR2Q96P88 292 aa9.35□□□□□ -0.91
USP3-219ENST00000561326 GPA33Q99795 319 aa9.35□□□□□ -0.91
USP3-219ENST00000561326 NANSQ9NR45 359 aa9.35□□□□□ -0.91
USP3-219ENST00000561326 C20orf141Q9NUB4 165 aa9.35□□□□□ -0.91
USP3-219ENST00000561326 TBC1D23Q9NUY8 699 aa9.35□□□□□ -0.91
USP3-219ENST00000561326 UBAP1Q9NZ09 502 aa9.35□□□□□ -0.91
USP3-219ENST00000561326 DKKL1Q9UK85 242 aa9.35□□□□□ -0.91
USP3-219ENST00000561326 BLOC1S6Q9UL45 172 aa9.35□□□□□ -0.91
USP3-219ENST00000561326 WASF3Q9UPY6 502 aa9.35□□□□□ -0.91
USP3-219ENST00000561326 BAIAP2Q9UQB8 552 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms