RNA–Protein interactions for RNA: ENST00000561065.1

LMX1B-204, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMX1B, Length 1,300 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-204ENST00000561065 PRAMEF8Q5VWM4 474 aa14.2□□□□□ -0.14
LMX1B-204ENST00000561065 PRAMEF7Q5VXH5 474 aa14.2□□□□□ -0.14
LMX1B-204ENST00000561065 C3orf33Q6P1S2 294 aa14.2□□□□□ -0.14
LMX1B-204ENST00000561065 FCRLAQ7L513 359 aa14.2□□□□□ -0.14
LMX1B-204ENST00000561065 STK32CQ86UX6 486 aa14.2□□□□□ -0.14
LMX1B-204ENST00000561065 TUSC5Q8IXB3 177 aa14.2□□□□□ -0.14
LMX1B-204ENST00000561065 SLC43A2Q8N370 569 aa14.2□□□□□ -0.14
LMX1B-204ENST00000561065 OR9I1Q8NGQ6 314 aa14.2□□□□□ -0.14
LMX1B-204ENST00000561065 PNPT1Q8TCS8 783 aaKnown RBP14.2□□□□□ -0.14
LMX1B-204ENST00000561065 WDR60Q8WVS4 1066 aa14.2□□□□□ -0.14
LMX1B-204ENST00000561065 TACO1Q9BSH4 297 aaKnown RBP14.2□□□□□ -0.14
LMX1B-204ENST00000561065 NPHS2Q9NP85 383 aa14.2□□□□□ -0.14
LMX1B-204ENST00000561065 SLC6A13Q9NSD5 602 aa14.2□□□□□ -0.14
LMX1B-204ENST00000561065 NDUFAF1Q9Y375 327 aa14.2□□□□□ -0.14
LMX1B-204ENST00000561065 PCDHB14Q9Y5E9 798 aa14.2□□□□□ -0.14
LMX1B-204ENST00000561065 ARID1AO14497 2285 aa14.19□□□□□ -0.14
LMX1B-204ENST00000561065 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP14.19□□□□□ -0.14
LMX1B-204ENST00000561065 NR5A2O00482 541 aa14.19□□□□□ -0.14
LMX1B-204ENST00000561065 ANGPT2O15123 496 aa14.19□□□□□ -0.14
LMX1B-204ENST00000561065 SMAD9O15198 467 aaKnown RBP14.19□□□□□ -0.14
LMX1B-204ENST00000561065 KLF4O43474 513 aa14.19□□□□□ -0.14
LMX1B-204ENST00000561065 CHRM4P08173 479 aa14.19□□□□□ -0.14
LMX1B-204ENST00000561065 VIMP08670 466 aaKnown RBP14.19□□□□□ -0.14
LMX1B-204ENST00000561065 HOXC12P31275 282 aa14.19□□□□□ -0.14
LMX1B-204ENST00000561065 SESN3P58005 492 aa14.19□□□□□ -0.14
LMX1B-204ENST00000561065 COPZ1P61923 177 aa14.19□□□□□ -0.14
LMX1B-204ENST00000561065 CSNK2A1P68400 391 aaPredicted RBP14.19□□□□□ -0.14
LMX1B-204ENST00000561065 TSC22D1Q15714 1073 aa14.19□□□□□ -0.14
LMX1B-204ENST00000561065 DNAJC14Q6Y2X3 702 aaPredicted RBP14.19□□□□□ -0.14
LMX1B-204ENST00000561065 KRT73Q86Y46 540 aa14.19□□□□□ -0.14
LMX1B-204ENST00000561065 GABRG1Q8N1C3 465 aa14.19□□□□□ -0.14
LMX1B-204ENST00000561065 ANKFN1Q8N957 763 aa14.19□□□□□ -0.14
LMX1B-204ENST00000561065 PSD2Q9BQI7 771 aa14.19□□□□□ -0.14
LMX1B-204ENST00000561065 SPATA5L1Q9BVQ7 753 aa14.19□□□□□ -0.14
LMX1B-204ENST00000561065 ACTR6Q9GZN1 396 aa14.19□□□□□ -0.14
LMX1B-204ENST00000561065 UBTD1Q9HAC8 227 aa14.19□□□□□ -0.14
LMX1B-204ENST00000561065 GP6Q9HCN6 339 aa14.19□□□□□ -0.14
LMX1B-204ENST00000561065 ACER3Q9NUN7 267 aa14.19□□□□□ -0.14
LMX1B-204ENST00000561065 LEF1Q9UJU2 399 aaPredicted RBP14.19□□□□□ -0.14
LMX1B-204ENST00000561065 TFPTP0C1Z6 253 aa14.18□□□□□ -0.14
LMX1B-204ENST00000561065 PSMB1P20618 241 aaKnown RBP14.18□□□□□ -0.14
LMX1B-204ENST00000561065 MERTKQ12866 999 aa14.18□□□□□ -0.14
LMX1B-204ENST00000561065 RGNQ15493 299 aa14.18□□□□□ -0.14
LMX1B-204ENST00000561065 LIN52Q52LA3 116 aa14.18□□□□□ -0.14
LMX1B-204ENST00000561065 COX20Q5RI15 118 aa14.18□□□□□ -0.14
LMX1B-204ENST00000561065 BEND4Q6ZU67 534 aa14.18□□□□□ -0.14
LMX1B-204ENST00000561065 PLEKHM3Q6ZWE6 761 aa14.18□□□□□ -0.14
LMX1B-204ENST00000561065 GRINAQ7Z429 371 aa14.18□□□□□ -0.14
LMX1B-204ENST00000561065 OR52P1PQ8NH57 321 aa14.18□□□□□ -0.14
LMX1B-204ENST00000561065 ZHX1-C8orf76Q96EF9 292 aa14.18□□□□□ -0.14
LMX1B-204ENST00000561065 OR5B2Q96R09 309 aa14.18□□□□□ -0.14
LMX1B-204ENST00000561065 ZNF300Q96RE9 604 aaPredicted RBP14.18□□□□□ -0.14
LMX1B-204ENST00000561065 SLC38A1Q9H2H9 487 aa14.18□□□□□ -0.14
LMX1B-204ENST00000561065 GSX1Q9H4S2 264 aaPredicted RBP14.18□□□□□ -0.14
LMX1B-204ENST00000561065 BEX4Q9NWD9 120 aaPredicted RBP14.18□□□□□ -0.14
LMX1B-204ENST00000561065 CFAP73A6NFT4 308 aa14.17□□□□□ -0.14
LMX1B-204ENST00000561065 PRKD3O94806 890 aa14.17□□□□□ -0.14
LMX1B-204ENST00000561065 PLAUP00749 431 aa14.17□□□□□ -0.14
LMX1B-204ENST00000561065 THBS1P07996 1170 aa14.17□□□□□ -0.14
LMX1B-204ENST00000561065 ETFAP13804 333 aa14.17□□□□□ -0.14
LMX1B-204ENST00000561065 RYKP34925 604 aa14.17□□□□□ -0.14
LMX1B-204ENST00000561065 ARFIP2P53365 341 aa14.17□□□□□ -0.14
LMX1B-204ENST00000561065 MVDP53602 400 aa14.17□□□□□ -0.14
LMX1B-204ENST00000561065 RAC3P60763 192 aa14.17□□□□□ -0.14
LMX1B-204ENST00000561065 MAPK11Q15759 364 aa14.17□□□□□ -0.14
LMX1B-204ENST00000561065 TMEM201Q5SNT2 666 aa14.17□□□□□ -0.14
LMX1B-204ENST00000561065 LRIF1Q5T3J3 769 aa14.17□□□□□ -0.14
LMX1B-204ENST00000561065 SLC2A7Q6PXP3 512 aa14.17□□□□□ -0.14
LMX1B-204ENST00000561065 SEZ6L2Q6UXD5 910 aa14.17□□□□□ -0.14
LMX1B-204ENST00000561065 ZC3HAV1Q7Z2W4 902 aaKnown RBP14.17□□□□□ -0.14
LMX1B-204ENST00000561065 WFDC8Q8IUA0 241 aa14.17□□□□□ -0.14
LMX1B-204ENST00000561065 FUNDC1Q8IVP5 155 aa14.17□□□□□ -0.14
LMX1B-204ENST00000561065 BHLHE22Q8NFJ8 381 aaPredicted RBP14.17□□□□□ -0.14
LMX1B-204ENST00000561065 BBS10Q8TAM1 723 aa14.17□□□□□ -0.14
LMX1B-204ENST00000561065 SLC38A5Q8WUX1 472 aa14.17□□□□□ -0.14
LMX1B-204ENST00000561065 IGFBPL1Q8WX77 278 aa14.17□□□□□ -0.14
LMX1B-204ENST00000561065 CNOT9Q92600 299 aaKnown RBP14.17□□□□□ -0.14
LMX1B-204ENST00000561065 S100PBPQ96BU1 408 aa14.17□□□□□ -0.14
LMX1B-204ENST00000561065 DNAJA3Q96EY1 480 aa14.17□□□□□ -0.14
LMX1B-204ENST00000561065 CCDC106Q9BWC9 280 aa14.17□□□□□ -0.14
LMX1B-204ENST00000561065 PAIP1Q9H074 479 aaKnown RBP14.17□□□□□ -0.14
LMX1B-204ENST00000561065 BCO1Q9HAY6 547 aa14.17□□□□□ -0.14
LMX1B-204ENST00000561065 NIPSNAP3AQ9UFN0 247 aaPredicted RBP14.17□□□□□ -0.14
LMX1B-204ENST00000561065 ZNF814B7Z6K7 855 aa14.16□□□□□ -0.14
LMX1B-204ENST00000561065 FAAHO00519 579 aa14.16□□□□□ -0.14
LMX1B-204ENST00000561065 AP3D1O14617 1153 aa14.16□□□□□ -0.14
LMX1B-204ENST00000561065 CYTIPO60759 359 aa14.16□□□□□ -0.14
LMX1B-204ENST00000561065 SERPINB7O75635 380 aa14.16□□□□□ -0.14
LMX1B-204ENST00000561065 BCHEP06276 602 aa14.16□□□□□ -0.14
LMX1B-204ENST00000561065 FESP07332 822 aa14.16□□□□□ -0.14
LMX1B-204ENST00000561065 TFPIP10646 304 aa14.16□□□□□ -0.14
LMX1B-204ENST00000561065 ETS2P15036 469 aa14.16□□□□□ -0.14
LMX1B-204ENST00000561065 PPP3CBP16298 524 aa14.16□□□□□ -0.14
LMX1B-204ENST00000561065 RPS4Y1P22090 263 aaKnown RBP14.16□□□□□ -0.14
LMX1B-204ENST00000561065 DIO1P49895 249 aa14.16□□□□□ -0.14
LMX1B-204ENST00000561065 MAPRE2Q15555 327 aa14.16□□□□□ -0.14
LMX1B-204ENST00000561065 ACKR1Q16570 336 aa14.16□□□□□ -0.14
LMX1B-204ENST00000561065 GTDC1Q4AE62 458 aa14.16□□□□□ -0.14
LMX1B-204ENST00000561065 SYT14P1Q58G82 188 aa14.16□□□□□ -0.14
LMX1B-204ENST00000561065 BEX5Q5H9J7 111 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms