RNA–Protein interactions for RNA: ENST00000560983.1

HERC1-211, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 457 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-211ENST00000560983 HACD1B0YJ81 288 aa3.18□□□□□ -1.9
HERC1-211ENST00000560983 J3QLI3 93 aa3.18□□□□□ -1.9
HERC1-211ENST00000560983 PRYO14603 147 aa3.18□□□□□ -1.9
HERC1-211ENST00000560983 ERI3O43414 337 aaKnown RBP3.18□□□□□ -1.9
HERC1-211ENST00000560983 PLPP2O43688 288 aa3.18□□□□□ -1.9
HERC1-211ENST00000560983 LYZL6O75951 148 aa3.18□□□□□ -1.9
HERC1-211ENST00000560983 SEC14L2O76054 403 aa3.18□□□□□ -1.9
HERC1-211ENST00000560983 NDUFB8O95169 186 aa3.18□□□□□ -1.9
HERC1-211ENST00000560983 NDUFA7O95182 113 aa3.18□□□□□ -1.9
HERC1-211ENST00000560983 MT-ND5P03915 603 aa3.18□□□□□ -1.9
HERC1-211ENST00000560983 CSF1P09603 554 aa3.18□□□□□ -1.9
HERC1-211ENST00000560983 T-ENOLP0DO92 83 aa3.18□□□□□ -1.9
HERC1-211ENST00000560983 SKILP12757 684 aa3.18□□□□□ -1.9
HERC1-211ENST00000560983 ENO3P13929 434 aaPredicted RBP3.18□□□□□ -1.9
HERC1-211ENST00000560983 SAT1P21673 171 aa3.18□□□□□ -1.9
HERC1-211ENST00000560983 IGHV1-2P23083 117 aa3.18□□□□□ -1.9
HERC1-211ENST00000560983 COL8A2P25067 703 aa3.18□□□□□ -1.9
HERC1-211ENST00000560983 EDNRAP25101 427 aa3.18□□□□□ -1.9
HERC1-211ENST00000560983 CNTFP26441 200 aa3.18□□□□□ -1.9
HERC1-211ENST00000560983 EEF1GP26641 437 aaKnown RBP3.18□□□□□ -1.9
HERC1-211ENST00000560983 DUSP1P28562 367 aa3.18□□□□□ -1.9
HERC1-211ENST00000560983 ARRB2P32121 409 aa3.18□□□□□ -1.9
HERC1-211ENST00000560983 SERPINF1P36955 418 aa3.18□□□□□ -1.9
HERC1-211ENST00000560983 PPARGP37231 505 aaPredicted RBP3.18□□□□□ -1.9
HERC1-211ENST00000560983 CDKN2BP42772 138 aa3.18□□□□□ -1.9
HERC1-211ENST00000560983 TTPAP49638 278 aa3.18□□□□□ -1.9
HERC1-211ENST00000560983 ZNF83P51522 516 aa3.18□□□□□ -1.9
HERC1-211ENST00000560983 ZNF84P51523 738 aa3.18□□□□□ -1.9
HERC1-211ENST00000560983 PLA2G16P53816 162 aa3.18□□□□□ -1.9
HERC1-211ENST00000560983 RAG2P55895 527 aa3.18□□□□□ -1.9
HERC1-211ENST00000560983 RPS3AP61247 264 aaKnown RBP3.18□□□□□ -1.9
HERC1-211ENST00000560983 SNRPD2P62316 118 aaKnown RBP3.18□□□□□ -1.9
HERC1-211ENST00000560983 PRPSAP1Q14558 356 aa3.18□□□□□ -1.9
HERC1-211ENST00000560983 KRT31Q15323 416 aa3.18□□□□□ -1.9
HERC1-211ENST00000560983 SGCBQ16585 318 aa3.18□□□□□ -1.9
HERC1-211ENST00000560983 TPD52L1Q16890 204 aaPredicted RBP3.18□□□□□ -1.9
HERC1-211ENST00000560983 TMEM44Q2T9K0 475 aa3.18□□□□□ -1.9
HERC1-211ENST00000560983 ADPRMQ3LIE5 342 aa3.18□□□□□ -1.9
HERC1-211ENST00000560983 ODF3L2Q3SX64 289 aa3.18□□□□□ -1.9
HERC1-211ENST00000560983 KLF17Q5JT82 389 aaPredicted RBP3.18□□□□□ -1.9
HERC1-211ENST00000560983 NXNQ6DKJ4 435 aa3.18□□□□□ -1.9
HERC1-211ENST00000560983 ITPRIPL1Q6GPH6 555 aa3.18□□□□□ -1.9
HERC1-211ENST00000560983 ADNP2Q6IQ32 1131 aa3.18□□□□□ -1.9
HERC1-211ENST00000560983 SYT10Q6XYQ8 523 aa3.18□□□□□ -1.9
HERC1-211ENST00000560983 MBOAT1Q6ZNC8 495 aa3.18□□□□□ -1.9
HERC1-211ENST00000560983 Q6ZTC4 211 aa3.18□□□□□ -1.9
HERC1-211ENST00000560983 SSX8Q7RTT4 187 aa3.18□□□□□ -1.9
HERC1-211ENST00000560983 R3HCC1LQ7Z5L2 792 aaKnown RBP3.18□□□□□ -1.9
HERC1-211ENST00000560983 GALNT10Q86SR1 603 aa3.18□□□□□ -1.9
HERC1-211ENST00000560983 LRRC6Q86X45 466 aa3.18□□□□□ -1.9
HERC1-211ENST00000560983 TDRPQ86YL5 185 aa3.18□□□□□ -1.9
HERC1-211ENST00000560983 PRELID2Q8N945 189 aa3.18□□□□□ -1.9
HERC1-211ENST00000560983 FADS6Q8N9I5 356 aa3.18□□□□□ -1.9
HERC1-211ENST00000560983 MLKLQ8NB16 471 aa3.18□□□□□ -1.9
HERC1-211ENST00000560983 C17orf47Q8NEP4 570 aa3.18□□□□□ -1.9
HERC1-211ENST00000560983 NEK11Q8NG66 645 aa3.18□□□□□ -1.9
HERC1-211ENST00000560983 OR4M2Q8NGB6 313 aa3.18□□□□□ -1.9
HERC1-211ENST00000560983 OR52B6Q8NGF0 335 aa3.18□□□□□ -1.9
HERC1-211ENST00000560983 FAM110BQ8TC76 370 aa3.18□□□□□ -1.9
HERC1-211ENST00000560983 RNF138Q8WVD3 245 aa3.18□□□□□ -1.9
HERC1-211ENST00000560983 WDR60Q8WVS4 1066 aa3.18□□□□□ -1.9
HERC1-211ENST00000560983 LRTOMTQ8WZ04 291 aa3.18□□□□□ -1.9
HERC1-211ENST00000560983 NEIL2Q969S2 332 aa3.18□□□□□ -1.9
HERC1-211ENST00000560983 TBX15Q96SF7 602 aa3.18□□□□□ -1.9
HERC1-211ENST00000560983 DOK1Q99704 481 aa3.18□□□□□ -1.9
HERC1-211ENST00000560983 GPA33Q99795 319 aa3.18□□□□□ -1.9
HERC1-211ENST00000560983 B9D2Q9BPU9 175 aa3.18□□□□□ -1.9
HERC1-211ENST00000560983 MAPKAP1Q9BPZ7 522 aa3.18□□□□□ -1.9
HERC1-211ENST00000560983 C1QTNF6Q9BXI9 259 aa3.18□□□□□ -1.9
HERC1-211ENST00000560983 PRRG4Q9BZD6 226 aa3.18□□□□□ -1.9
HERC1-211ENST00000560983 DDX47Q9H0S4 455 aaKnown RBP3.18□□□□□ -1.9
HERC1-211ENST00000560983 RAB1BQ9H0U4 201 aa3.18□□□□□ -1.9
HERC1-211ENST00000560983 STMN4Q9H169 189 aaPredicted RBP3.18□□□□□ -1.9
HERC1-211ENST00000560983 NXF5Q9H1B4 397 aaKnown RBP3.18□□□□□ -1.9
HERC1-211ENST00000560983 PLK3Q9H4B4 646 aa3.18□□□□□ -1.9
HERC1-211ENST00000560983 NARFLQ9H6Q4 476 aa3.18□□□□□ -1.9
HERC1-211ENST00000560983 MYNNQ9NPC7 610 aa3.18□□□□□ -1.9
HERC1-211ENST00000560983 DECR2Q9NUI1 292 aa3.18□□□□□ -1.9
HERC1-211ENST00000560983 ARL8BQ9NVJ2 186 aa3.18□□□□□ -1.9
HERC1-211ENST00000560983 SDAD1Q9NVU7 687 aaKnown RBP eCLIP3.18□□□□□ -1.9
HERC1-211ENST00000560983 KLHL42Q9P2K6 505 aa3.18□□□□□ -1.9
HERC1-211ENST00000560983 LIMA1Q9UHB6 759 aaKnown RBP3.18□□□□□ -1.9
HERC1-211ENST00000560983 ICAM5Q9UMF0 924 aa3.18□□□□□ -1.9
HERC1-211ENST00000560983 PDE10AQ9Y233 779 aa3.18□□□□□ -1.9
HERC1-211ENST00000560983 AP4B1Q9Y6B7 739 aa3.18□□□□□ -1.9
HERC1-211ENST00000560983 NINQ8N4C6 2090 aa3.18□□□□□ -1.9
HERC1-211ENST00000560983 VPS13DQ5THJ4 4388 aa3.17□□□□□ -1.9
HERC1-211ENST00000560983 A0A1W2PR80 420 aa3.17□□□□□ -1.9
HERC1-211ENST00000560983 WI2-2373I1.2A0A1W2PRP0 233 aa3.17□□□□□ -1.9
HERC1-211ENST00000560983 TMEM129A0AVI4 362 aa3.17□□□□□ -1.9
HERC1-211ENST00000560983 SYCE3A1L190 88 aa3.17□□□□□ -1.9
HERC1-211ENST00000560983 EFCAB8A8MWE9 144 aa3.17□□□□□ -1.9
HERC1-211ENST00000560983 B9A039 149 aa3.17□□□□□ -1.9
HERC1-211ENST00000560983 KLF11O14901 512 aa3.17□□□□□ -1.9
HERC1-211ENST00000560983 ADAMDEC1O15204 470 aa3.17□□□□□ -1.9
HERC1-211ENST00000560983 NDUFS3O75489 264 aa3.17□□□□□ -1.9
HERC1-211ENST00000560983 EEDO75530 441 aaKnown RBP3.17□□□□□ -1.9
HERC1-211ENST00000560983 MPZL1O95297 269 aa3.17□□□□□ -1.9
HERC1-211ENST00000560983 METTL18O95568 372 aa3.17□□□□□ -1.9
HERC1-211ENST00000560983 TFP02787 698 aa3.17□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms