RNA–Protein interactions for RNA: ENST00000560679.1

TPM1-225, Transcript of tropomyosin 1, humanhuman

TSL 3

Gene TPM1, Length 292 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-225ENST00000560679 A0A1W2PNR3 127 aa8.67□□□□□ -1.02
TPM1-225ENST00000560679 LOC390937A0A1W2PQ73 354 aa8.67□□□□□ -1.02
TPM1-225ENST00000560679 A8MT66 165 aa8.67□□□□□ -1.02
TPM1-225ENST00000560679 ATP6V1G2-DDX39BF2Z307 99 aa8.67□□□□□ -1.02
TPM1-225ENST00000560679 SLCO1B7G3V0H7 640 aa8.67□□□□□ -1.02
TPM1-225ENST00000560679 KCNK2O95069 426 aa8.67□□□□□ -1.02
TPM1-225ENST00000560679 H6PDO95479 791 aa8.67□□□□□ -1.02
TPM1-225ENST00000560679 ENO1P06733 434 aaKnown RBP8.67□□□□□ -1.02
TPM1-225ENST00000560679 IFI6P09912 130 aa8.67□□□□□ -1.02
TPM1-225ENST00000560679 NTSP30990 170 aa8.67□□□□□ -1.02
TPM1-225ENST00000560679 EIF1P41567 113 aaKnown RBP8.67□□□□□ -1.02
TPM1-225ENST00000560679 RNF144AP50876 292 aaPredicted RBP8.67□□□□□ -1.02
TPM1-225ENST00000560679 RAC3P60763 192 aa8.67□□□□□ -1.02
TPM1-225ENST00000560679 ACTG1P63261 375 aa8.67□□□□□ -1.02
TPM1-225ENST00000560679 PHC1P78364 1004 aa8.67□□□□□ -1.02
TPM1-225ENST00000560679 CHRNB3Q05901 458 aa8.67□□□□□ -1.02
TPM1-225ENST00000560679 ACSM2AQ08AH3 577 aa8.67□□□□□ -1.02
TPM1-225ENST00000560679 RASGEF1BQ0VAM2 473 aa8.67□□□□□ -1.02
TPM1-225ENST00000560679 CARTPTQ16568 116 aa8.67□□□□□ -1.02
TPM1-225ENST00000560679 IQCCQ4KMZ1 466 aa8.67□□□□□ -1.02
TPM1-225ENST00000560679 ACSM2BQ68CK6 577 aa8.67□□□□□ -1.02
TPM1-225ENST00000560679 ABLIM2Q6H8Q1 611 aa8.67□□□□□ -1.02
TPM1-225ENST00000560679 FAM71E1Q6IPT2 247 aa8.67□□□□□ -1.02
TPM1-225ENST00000560679 KLHL17Q6TDP4 642 aa8.67□□□□□ -1.02
TPM1-225ENST00000560679 EPGNQ6UW88 154 aa8.67□□□□□ -1.02
TPM1-225ENST00000560679 RINLQ6ZS11 566 aa8.67□□□□□ -1.02
TPM1-225ENST00000560679 MISPQ8IVT2 679 aa8.67□□□□□ -1.02
TPM1-225ENST00000560679 ARHGAP24Q8N264 748 aa8.67□□□□□ -1.02
TPM1-225ENST00000560679 ATP6V1C2Q8NEY4 427 aa8.67□□□□□ -1.02
TPM1-225ENST00000560679 CDC26Q8NHZ8 85 aa8.67□□□□□ -1.02
TPM1-225ENST00000560679 PUM2Q8TB72 1066 aaKnown RBP eCLIP8.67□□□□□ -1.02
TPM1-225ENST00000560679 GPR151Q8TDV0 419 aa8.67□□□□□ -1.02
TPM1-225ENST00000560679 FBXO17Q96EF6 278 aa8.67□□□□□ -1.02
TPM1-225ENST00000560679 GIMAP5Q96F15 307 aa8.67□□□□□ -1.02
TPM1-225ENST00000560679 OTUB1Q96FW1 271 aaPredicted RBP8.67□□□□□ -1.02
TPM1-225ENST00000560679 MRGPRX4Q96LA9 322 aa8.67□□□□□ -1.02
TPM1-225ENST00000560679 TRMOQ9BU70 441 aa8.67□□□□□ -1.02
TPM1-225ENST00000560679 C1QTNF6Q9BXI9 259 aa8.67□□□□□ -1.02
TPM1-225ENST00000560679 C1QTNF3Q9BXJ4 246 aa8.67□□□□□ -1.02
TPM1-225ENST00000560679 CADM1Q9BY67 442 aaKnown RBP8.67□□□□□ -1.02
TPM1-225ENST00000560679 MMADHCQ9H3L0 296 aaPredicted RBP8.67□□□□□ -1.02
TPM1-225ENST00000560679 C3orf14Q9HBI5 128 aa8.67□□□□□ -1.02
TPM1-225ENST00000560679 MYNNQ9NPC7 610 aa8.67□□□□□ -1.02
TPM1-225ENST00000560679 NTMQ9P121 344 aa8.67□□□□□ -1.02
TPM1-225ENST00000560679 TMEFF2Q9UIK5 374 aaPredicted RBP8.67□□□□□ -1.02
TPM1-225ENST00000560679 ATP23Q9Y6H3 246 aa8.67□□□□□ -1.02
TPM1-225ENST00000560679 PMF1-BGLAPU3KQ54 211 aa8.67□□□□□ -1.02
TPM1-225ENST00000560679 VWFP04275 2813 aa8.66□□□□□ -1.02
TPM1-225ENST00000560679 A0A0A6YYJ9 748 aa8.66□□□□□ -1.02
TPM1-225ENST00000560679 A0A1W2PQD3 144 aa8.66□□□□□ -1.02
TPM1-225ENST00000560679 TMEM89A2RUT3 159 aa8.66□□□□□ -1.02
TPM1-225ENST00000560679 GJE1A6NN92 205 aa8.66□□□□□ -1.02
TPM1-225ENST00000560679 ZNF724A8MTY0 619 aa8.66□□□□□ -1.02
TPM1-225ENST00000560679 HDAC3O15379 428 aa8.66□□□□□ -1.02
TPM1-225ENST00000560679 GYG2O15488 501 aa8.66□□□□□ -1.02
TPM1-225ENST00000560679 GSC2O15499 205 aa8.66□□□□□ -1.02
TPM1-225ENST00000560679 SMIM24O75264 130 aa8.66□□□□□ -1.02
TPM1-225ENST00000560679 CHRNGP07510 517 aa8.66□□□□□ -1.02
TPM1-225ENST00000560679 ITGA5P08648 1049 aa8.66□□□□□ -1.02
TPM1-225ENST00000560679 ANXA4P09525 319 aaPredicted RBP8.66□□□□□ -1.02
TPM1-225ENST00000560679 PRKCAP17252 672 aa8.66□□□□□ -1.02
TPM1-225ENST00000560679 PRDX6P30041 224 aa8.66□□□□□ -1.02
TPM1-225ENST00000560679 APOBEC3AP31941 199 aaPredicted RBP8.66□□□□□ -1.02
TPM1-225ENST00000560679 NTF4P34130 210 aa8.66□□□□□ -1.02
TPM1-225ENST00000560679 RPL14P50914 215 aaKnown RBP8.66□□□□□ -1.02
TPM1-225ENST00000560679 ZNF763Q0D2J5 394 aa8.66□□□□□ -1.02
TPM1-225ENST00000560679 C2orf80Q0P641 193 aa8.66□□□□□ -1.02
TPM1-225ENST00000560679 SELENBP1Q13228 472 aa8.66□□□□□ -1.02
TPM1-225ENST00000560679 GABRA6Q16445 453 aa8.66□□□□□ -1.02
TPM1-225ENST00000560679 DUSP5Q16690 384 aa8.66□□□□□ -1.02
TPM1-225ENST00000560679 NDUFAF6Q330K2 333 aa8.66□□□□□ -1.02
TPM1-225ENST00000560679 DNAL1Q4LDG9 190 aa8.66□□□□□ -1.02
TPM1-225ENST00000560679 EXOSC6Q5RKV6 272 aaKnown RBP8.66□□□□□ -1.02
TPM1-225ENST00000560679 PRR31Q5SQ13 230 aa8.66□□□□□ -1.02
TPM1-225ENST00000560679 DDX59Q5T1V6 619 aaKnown RBP eCLIP8.66□□□□□ -1.02
TPM1-225ENST00000560679 CCNJQ5T5M9 372 aa8.66□□□□□ -1.02
TPM1-225ENST00000560679 METTL21CQ5VZV1 264 aa8.66□□□□□ -1.02
TPM1-225ENST00000560679 FBXW9Q5XUX1 488 aa8.66□□□□□ -1.02
TPM1-225ENST00000560679 ZNF551Q7Z340 670 aaPredicted RBP8.66□□□□□ -1.02
TPM1-225ENST00000560679 SLC22A9Q8IVM8 553 aa8.66□□□□□ -1.02
TPM1-225ENST00000560679 CCNYL1Q8N7R7 359 aa8.66□□□□□ -1.02
TPM1-225ENST00000560679 C3orf56Q8N813 242 aa8.66□□□□□ -1.02
TPM1-225ENST00000560679 WDR31Q8NA23 367 aa8.66□□□□□ -1.02
TPM1-225ENST00000560679 SLC16A11Q8NCK7 471 aa8.66□□□□□ -1.02
TPM1-225ENST00000560679 MCUR1Q96AQ8 359 aa8.66□□□□□ -1.02
TPM1-225ENST00000560679 CCDC28BQ9BUN5 200 aa8.66□□□□□ -1.02
TPM1-225ENST00000560679 HHATLQ9HCP6 504 aa8.66□□□□□ -1.02
TPM1-225ENST00000560679 TAS2R7Q9NYW3 318 aa8.66□□□□□ -1.02
TPM1-225ENST00000560679 MALT1Q9UDY8 824 aa8.66□□□□□ -1.02
TPM1-225ENST00000560679 TMCO1Q9UM00 188 aa8.66□□□□□ -1.02
TPM1-225ENST00000560679 ICAM5Q9UMF0 924 aa8.66□□□□□ -1.02
TPM1-225ENST00000560679 GPC6Q9Y625 555 aaPredicted RBP8.66□□□□□ -1.02
TPM1-225ENST00000560679 HEATR1Q9H583 2144 aaKnown RBP8.66□□□□□ -1.02
TPM1-225ENST00000560679 IGKV3D-15A0A087WSY6 115 aa8.65□□□□□ -1.02
TPM1-225ENST00000560679 CIB4A0PJX0 185 aa8.65□□□□□ -1.02
TPM1-225ENST00000560679 TTC36A6NLP5 189 aa8.65□□□□□ -1.02
TPM1-225ENST00000560679 B2RBV5 119 aa8.65□□□□□ -1.02
TPM1-225ENST00000560679 FAM157AC9JC47 383 aa8.65□□□□□ -1.02
TPM1-225ENST00000560679 ETV2O00321 342 aaPredicted RBP8.65□□□□□ -1.02
TPM1-225ENST00000560679 SCDO00767 359 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 140.6 ms