RNA–Protein interactions for RNA: ENST00000560243.5

RABGGTA-216, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 704 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-216ENST00000560243 SULT2B1O00204 365 aa10.36□□□□□ -0.75
RABGGTA-216ENST00000560243 FRS3O43559 492 aa10.36□□□□□ -0.75
RABGGTA-216ENST00000560243 HNRNPCL1O60812 293 aaKnown RBP10.36□□□□□ -0.75
RABGGTA-216ENST00000560243 RAMP1O60894 148 aa10.36□□□□□ -0.75
RABGGTA-216ENST00000560243 PGM3O95394 542 aa10.36□□□□□ -0.75
RABGGTA-216ENST00000560243 THBDP07204 575 aa10.36□□□□□ -0.75
RABGGTA-216ENST00000560243 PABPC4LP0CB38 370 aaKnown RBP10.36□□□□□ -0.75
RABGGTA-216ENST00000560243 HNRNPCL4P0DMR1 293 aa10.36□□□□□ -0.75
RABGGTA-216ENST00000560243 TACR3P29371 465 aa10.36□□□□□ -0.75
RABGGTA-216ENST00000560243 PCYT1AP49585 367 aa10.36□□□□□ -0.75
RABGGTA-216ENST00000560243 IST1P53990 364 aa10.36□□□□□ -0.75
RABGGTA-216ENST00000560243 HOXC5Q00444 222 aa10.36□□□□□ -0.75
RABGGTA-216ENST00000560243 GNA13Q14344 377 aa10.36□□□□□ -0.75
RABGGTA-216ENST00000560243 RNPS1Q15287 305 aaKnown RBP10.36□□□□□ -0.75
RABGGTA-216ENST00000560243 TESK1Q15569 626 aa10.36□□□□□ -0.75
RABGGTA-216ENST00000560243 TSC22D1Q15714 1073 aa10.36□□□□□ -0.75
RABGGTA-216ENST00000560243 LIN52Q52LA3 116 aa10.36□□□□□ -0.75
RABGGTA-216ENST00000560243 TMEM201Q5SNT2 666 aa10.36□□□□□ -0.75
RABGGTA-216ENST00000560243 FBXW10Q5XX13 1052 aa10.36□□□□□ -0.75
RABGGTA-216ENST00000560243 GTF2IRD2BQ6EKJ0 949 aa10.36□□□□□ -0.75
RABGGTA-216ENST00000560243 CGB2Q6NT52 195 aa10.36□□□□□ -0.75
RABGGTA-216ENST00000560243 ZC3HAV1Q7Z2W4 902 aaKnown RBP10.36□□□□□ -0.75
RABGGTA-216ENST00000560243 GTF2IRD2Q86UP8 949 aa10.36□□□□□ -0.75
RABGGTA-216ENST00000560243 RETREG3Q86VR2 466 aa10.36□□□□□ -0.75
RABGGTA-216ENST00000560243 COMTD1Q86VU5 262 aa10.36□□□□□ -0.75
RABGGTA-216ENST00000560243 NFKBIDQ8NI38 313 aa10.36□□□□□ -0.75
RABGGTA-216ENST00000560243 SLC25A43Q8WUT9 341 aaPredicted RBP10.36□□□□□ -0.75
RABGGTA-216ENST00000560243 ZNF300Q96RE9 604 aaPredicted RBP10.36□□□□□ -0.75
RABGGTA-216ENST00000560243 PSD2Q9BQI7 771 aa10.36□□□□□ -0.75
RABGGTA-216ENST00000560243 CPPED1Q9BRF8 314 aaPredicted RBP10.36□□□□□ -0.75
RABGGTA-216ENST00000560243 MED18Q9BUE0 208 aa10.36□□□□□ -0.75
RABGGTA-216ENST00000560243 TMEM120AQ9BXJ8 343 aa10.36□□□□□ -0.75
RABGGTA-216ENST00000560243 PLEKHF2Q9H8W4 249 aa10.36□□□□□ -0.75
RABGGTA-216ENST00000560243 BCL2L10Q9HD36 194 aa10.36□□□□□ -0.75
RABGGTA-216ENST00000560243 FGFR1OP2Q9NVK5 253 aa10.36□□□□□ -0.75
RABGGTA-216ENST00000560243 TMEM45AQ9NWC5 275 aa10.36□□□□□ -0.75
RABGGTA-216ENST00000560243 CALML5Q9NZT1 146 aa10.36□□□□□ -0.75
RABGGTA-216ENST00000560243 NIPSNAP3AQ9UFN0 247 aaPredicted RBP10.36□□□□□ -0.75
RABGGTA-216ENST00000560243 PLEKHA6Q9Y2H5 1048 aa10.36□□□□□ -0.75
RABGGTA-216ENST00000560243 TMED7Q9Y3B3 224 aa10.36□□□□□ -0.75
RABGGTA-216ENST00000560243 ACANP16112 2415 aa10.35□□□□□ -0.75
RABGGTA-216ENST00000560243 FAAHO00519 579 aa10.35□□□□□ -0.75
RABGGTA-216ENST00000560243 CASKO14936 926 aa10.35□□□□□ -0.75
RABGGTA-216ENST00000560243 CYTIPO60759 359 aa10.35□□□□□ -0.75
RABGGTA-216ENST00000560243 YES1P07947 543 aa10.35□□□□□ -0.75
RABGGTA-216ENST00000560243 THBS1P07996 1170 aa10.35□□□□□ -0.75
RABGGTA-216ENST00000560243 ARAFP10398 606 aa10.35□□□□□ -0.75
RABGGTA-216ENST00000560243 SLC1A3P43003 542 aa10.35□□□□□ -0.75
RABGGTA-216ENST00000560243 POLR2HP52434 150 aaKnown RBP10.35□□□□□ -0.75
RABGGTA-216ENST00000560243 GUCY1A3Q02108 690 aa10.35□□□□□ -0.75
RABGGTA-216ENST00000560243 RASGEF1BQ0VAM2 473 aa10.35□□□□□ -0.75
RABGGTA-216ENST00000560243 FADDQ13158 208 aa10.35□□□□□ -0.75
RABGGTA-216ENST00000560243 LARS2Q15031 903 aaKnown RBP10.35□□□□□ -0.75
RABGGTA-216ENST00000560243 ADRM1Q16186 407 aa10.35□□□□□ -0.75
RABGGTA-216ENST00000560243 GCNT6Q5T4J0 391 aa10.35□□□□□ -0.75
RABGGTA-216ENST00000560243 RNF220Q5VTB9 566 aa10.35□□□□□ -0.75
RABGGTA-216ENST00000560243 TFAP2EQ6VUC0 442 aa10.35□□□□□ -0.75
RABGGTA-216ENST00000560243 SERPINA11Q86U17 422 aa10.35□□□□□ -0.75
RABGGTA-216ENST00000560243 CCDC103Q8IW40 242 aa10.35□□□□□ -0.75
RABGGTA-216ENST00000560243 GABRG1Q8N1C3 465 aa10.35□□□□□ -0.75
RABGGTA-216ENST00000560243 SLC43A2Q8N370 569 aa10.35□□□□□ -0.75
RABGGTA-216ENST00000560243 CADM2Q8N3J6 435 aa10.35□□□□□ -0.75
RABGGTA-216ENST00000560243 ADAM19Q9H013 955 aa10.35□□□□□ -0.75
RABGGTA-216ENST00000560243 RAD21L1Q9H4I0 556 aa10.35□□□□□ -0.75
RABGGTA-216ENST00000560243 RABEP2Q9H5N1 569 aa10.35□□□□□ -0.75
RABGGTA-216ENST00000560243 BCO1Q9HAY6 547 aa10.35□□□□□ -0.75
RABGGTA-216ENST00000560243 CCM2LQ9NUG4 571 aaPredicted RBP10.35□□□□□ -0.75
RABGGTA-216ENST00000560243 THUMPD1Q9NXG2 353 aaKnown RBP10.35□□□□□ -0.75
RABGGTA-216ENST00000560243 ST6GALNAC2Q9UJ37 374 aa10.35□□□□□ -0.75
RABGGTA-216ENST00000560243 GMEB1Q9Y692 573 aa10.35□□□□□ -0.75
RABGGTA-216ENST00000560243 MED13LQ71F56 2210 aa10.34□□□□□ -0.75
RABGGTA-216ENST00000560243 TMEM247A6NEH6 219 aa10.34□□□□□ -0.75
RABGGTA-216ENST00000560243 GCM2O75603 506 aaPredicted RBP10.34□□□□□ -0.75
RABGGTA-216ENST00000560243 PMS2P2O95744 297 aa10.34□□□□□ -0.75
RABGGTA-216ENST00000560243 IMPDH2P12268 514 aa10.34□□□□□ -0.75
RABGGTA-216ENST00000560243 GPX2P18283 190 aa10.34□□□□□ -0.75
RABGGTA-216ENST00000560243 CRYGSP22914 178 aa10.34□□□□□ -0.75
RABGGTA-216ENST00000560243 NTF4P34130 210 aa10.34□□□□□ -0.75
RABGGTA-216ENST00000560243 HTR3AP46098 478 aa10.34□□□□□ -0.75
RABGGTA-216ENST00000560243 OR2B6P58173 313 aa10.34□□□□□ -0.75
RABGGTA-216ENST00000560243 CSNK2A1P68400 391 aaPredicted RBP10.34□□□□□ -0.75
RABGGTA-216ENST00000560243 IRX1P78414 480 aaPredicted RBP10.34□□□□□ -0.75
RABGGTA-216ENST00000560243 BNIP2Q12982 314 aa10.34□□□□□ -0.75
RABGGTA-216ENST00000560243 SELPLGQ14242 412 aa10.34□□□□□ -0.75
RABGGTA-216ENST00000560243 ZNF311Q5JNZ3 666 aa10.34□□□□□ -0.75
RABGGTA-216ENST00000560243 PRAMEF8Q5VWM4 474 aa10.34□□□□□ -0.75
RABGGTA-216ENST00000560243 PRAMEF7Q5VXH5 474 aa10.34□□□□□ -0.75
RABGGTA-216ENST00000560243 ABLIM2Q6H8Q1 611 aa10.34□□□□□ -0.75
RABGGTA-216ENST00000560243 BEND4Q6ZU67 534 aa10.34□□□□□ -0.75
RABGGTA-216ENST00000560243 DHDDSQ86SQ9 333 aa10.34□□□□□ -0.75
RABGGTA-216ENST00000560243 MTDHQ86UE4 582 aaKnown RBP10.34□□□□□ -0.75
RABGGTA-216ENST00000560243 STK32CQ86UX6 486 aa10.34□□□□□ -0.75
RABGGTA-216ENST00000560243 CXorf67Q86X51 503 aaPredicted RBP10.34□□□□□ -0.75
RABGGTA-216ENST00000560243 ZNF440Q8IYI8 595 aa10.34□□□□□ -0.75
RABGGTA-216ENST00000560243 BBS10Q8TAM1 723 aa10.34□□□□□ -0.75
RABGGTA-216ENST00000560243 HS3ST6Q96QI5 342 aa10.34□□□□□ -0.75
RABGGTA-216ENST00000560243 SPATA9Q9BWV2 254 aa10.34□□□□□ -0.75
RABGGTA-216ENST00000560243 GP6Q9HCN6 339 aa10.34□□□□□ -0.75
RABGGTA-216ENST00000560243 KLHL9Q9P2J3 617 aa10.34□□□□□ -0.75
RABGGTA-216ENST00000560243 PRSS50Q9UI38 385 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms