RNA–Protein interactions for RNA: ENST00000558815.5

RPL28-207, Transcript of ribosomal protein L28, humanhuman

TSL 2 BASIC

Gene RPL28, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-207ENST00000558815 ADGRG3Q86Y34 549 aa13.62□□□□□ -0.23
RPL28-207ENST00000558815 PMM1Q92871 262 aa13.62□□□□□ -0.23
RPL28-207ENST00000558815 ZHX1-C8orf76Q96EF9 292 aa13.62□□□□□ -0.23
RPL28-207ENST00000558815 ARL5BQ96KC2 179 aa13.62□□□□□ -0.23
RPL28-207ENST00000558815 PSD2Q9BQI7 771 aa13.62□□□□□ -0.23
RPL28-207ENST00000558815 FANCFQ9NPI8 374 aa13.62□□□□□ -0.23
RPL28-207ENST00000558815 THUMPD1Q9NXG2 353 aaKnown RBP13.62□□□□□ -0.23
RPL28-207ENST00000558815 VAPAQ9P0L0 249 aa13.62□□□□□ -0.23
RPL28-207ENST00000558815 A0A1W2PPR1 153 aa13.61□□□□□ -0.23
RPL28-207ENST00000558815 TMEM72A0PK05 275 aa13.61□□□□□ -0.23
RPL28-207ENST00000558815 CDHR4A6H8M9 788 aa13.61□□□□□ -0.23
RPL28-207ENST00000558815 SIAH2O43255 324 aa13.61□□□□□ -0.23
RPL28-207ENST00000558815 CYTIPO60759 359 aa13.61□□□□□ -0.23
RPL28-207ENST00000558815 GOSR1O95249 250 aa13.61□□□□□ -0.23
RPL28-207ENST00000558815 YES1P07947 543 aa13.61□□□□□ -0.23
RPL28-207ENST00000558815 CRYGSP22914 178 aa13.61□□□□□ -0.23
RPL28-207ENST00000558815 HTR3AP46098 478 aa13.61□□□□□ -0.23
RPL28-207ENST00000558815 ZNF311Q5JNZ3 666 aa13.61□□□□□ -0.23
RPL28-207ENST00000558815 GCNT6Q5T4J0 391 aa13.61□□□□□ -0.23
RPL28-207ENST00000558815 STAC2Q6ZMT1 411 aa13.61□□□□□ -0.23
RPL28-207ENST00000558815 C22orf34Q6ZV56 151 aa13.61□□□□□ -0.23
RPL28-207ENST00000558815 CXorf67Q86X51 503 aaPredicted RBP13.61□□□□□ -0.23
RPL28-207ENST00000558815 WFDC8Q8IUA0 241 aa13.61□□□□□ -0.23
RPL28-207ENST00000558815 ZNF440Q8IYI8 595 aa13.61□□□□□ -0.23
RPL28-207ENST00000558815 C10orf111Q8N326 155 aa13.61□□□□□ -0.23
RPL28-207ENST00000558815 CLIP4Q8N3C7 705 aa13.61□□□□□ -0.23
RPL28-207ENST00000558815 NFKBIDQ8NI38 313 aa13.61□□□□□ -0.23
RPL28-207ENST00000558815 BBS10Q8TAM1 723 aa13.61□□□□□ -0.23
RPL28-207ENST00000558815 TACO1Q9BSH4 297 aaKnown RBP13.61□□□□□ -0.23
RPL28-207ENST00000558815 TMEM120AQ9BXJ8 343 aa13.61□□□□□ -0.23
RPL28-207ENST00000558815 ACTR6Q9GZN1 396 aa13.61□□□□□ -0.23
RPL28-207ENST00000558815 RABEP2Q9H5N1 569 aa13.61□□□□□ -0.23
RPL28-207ENST00000558815 A4GALTQ9NPC4 353 aa13.61□□□□□ -0.23
RPL28-207ENST00000558815 SLC52A3Q9NQ40 469 aa13.61□□□□□ -0.23
RPL28-207ENST00000558815 ZNF446Q9NWS9 450 aa13.61□□□□□ -0.23
RPL28-207ENST00000558815 OSGIN1Q9UJX0 560 aa13.61□□□□□ -0.23
RPL28-207ENST00000558815 EDARQ9UNE0 448 aa13.61□□□□□ -0.23
RPL28-207ENST00000558815 ZNF232Q9UNY5 417 aa13.61□□□□□ -0.23
RPL28-207ENST00000558815 TRIM33Q9UPN9 1127 aa13.61□□□□□ -0.23
RPL28-207ENST00000558815 A0A1W2PP18 115 aa13.6□□□□□ -0.23
RPL28-207ENST00000558815 ANGPT2O15123 496 aa13.6□□□□□ -0.23
RPL28-207ENST00000558815 FRS3O43559 492 aa13.6□□□□□ -0.23
RPL28-207ENST00000558815 THBS1P07996 1170 aa13.6□□□□□ -0.23
RPL28-207ENST00000558815 PRG2P13727 222 aa13.6□□□□□ -0.23
RPL28-207ENST00000558815 PPIBP23284 216 aaKnown RBP13.6□□□□□ -0.23
RPL28-207ENST00000558815 CXCR1P25024 350 aa13.6□□□□□ -0.23
RPL28-207ENST00000558815 SLC1A3P43003 542 aa13.6□□□□□ -0.23
RPL28-207ENST00000558815 PCYT1AP49585 367 aa13.6□□□□□ -0.23
RPL28-207ENST00000558815 COPZ1P61923 177 aa13.6□□□□□ -0.23
RPL28-207ENST00000558815 KEAP1Q14145 624 aa13.6□□□□□ -0.23
RPL28-207ENST00000558815 RNF220Q5VTB9 566 aa13.6□□□□□ -0.23
RPL28-207ENST00000558815 PAMR1Q6UXH9 720 aa13.6□□□□□ -0.23
RPL28-207ENST00000558815 DHDDSQ86SQ9 333 aa13.6□□□□□ -0.23
RPL28-207ENST00000558815 SERPINA11Q86U17 422 aa13.6□□□□□ -0.23
RPL28-207ENST00000558815 DDIT4LQ96D03 193 aa13.6□□□□□ -0.23
RPL28-207ENST00000558815 SPATA9Q9BWV2 254 aa13.6□□□□□ -0.23
RPL28-207ENST00000558815 BCO1Q9HAY6 547 aa13.6□□□□□ -0.23
RPL28-207ENST00000558815 GP6Q9HCN6 339 aa13.6□□□□□ -0.23
RPL28-207ENST00000558815 PRSS50Q9UI38 385 aa13.6□□□□□ -0.23
RPL28-207ENST00000558815 LEF1Q9UJU2 399 aaPredicted RBP13.6□□□□□ -0.23
RPL28-207ENST00000558815 IFT52Q9Y366 437 aa13.6□□□□□ -0.23
RPL28-207ENST00000558815 HDGFL3Q9Y3E1 203 aa13.6□□□□□ -0.23
RPL28-207ENST00000558815 ZC3H12DA2A288 527 aaKnown RBP13.59□□□□□ -0.23
RPL28-207ENST00000558815 DEFB108AA8MXU0 73 aa13.59□□□□□ -0.23
RPL28-207ENST00000558815 EVPLLA8MZ36 301 aa13.59□□□□□ -0.23
RPL28-207ENST00000558815 PGM3O95394 542 aa13.59□□□□□ -0.23
RPL28-207ENST00000558815 PMS2P2O95744 297 aa13.59□□□□□ -0.23
RPL28-207ENST00000558815 ADAP00813 363 aa13.59□□□□□ -0.23
RPL28-207ENST00000558815 RAF1P04049 648 aa13.59□□□□□ -0.23
RPL28-207ENST00000558815 ARAFP10398 606 aa13.59□□□□□ -0.23
RPL28-207ENST00000558815 BMP2P12643 396 aa13.59□□□□□ -0.23
RPL28-207ENST00000558815 IL32P24001 234 aa13.59□□□□□ -0.23
RPL28-207ENST00000558815 IRX1P78414 480 aaPredicted RBP13.59□□□□□ -0.23
RPL28-207ENST00000558815 HOXC5Q00444 222 aa13.59□□□□□ -0.23
RPL28-207ENST00000558815 TESK1Q15569 626 aa13.59□□□□□ -0.23
RPL28-207ENST00000558815 MTDHQ86UE4 582 aaKnown RBP13.59□□□□□ -0.23
RPL28-207ENST00000558815 CCDC103Q8IW40 242 aa13.59□□□□□ -0.23
RPL28-207ENST00000558815 ZNF100Q8IYN0 542 aa13.59□□□□□ -0.23
RPL28-207ENST00000558815 NINJ1Q92982 152 aa13.59□□□□□ -0.23
RPL28-207ENST00000558815 HS3ST6Q96QI5 342 aa13.59□□□□□ -0.23
RPL28-207ENST00000558815 IKZF5Q9H5V7 419 aa13.59□□□□□ -0.23
RPL28-207ENST00000558815 ZNF385DQ9H6B1 395 aa13.59□□□□□ -0.23
RPL28-207ENST00000558815 ARMC7Q9H6L4 198 aa13.59□□□□□ -0.23
RPL28-207ENST00000558815 PLEKHF2Q9H8W4 249 aa13.59□□□□□ -0.23
RPL28-207ENST00000558815 UBTD1Q9HAC8 227 aa13.59□□□□□ -0.23
RPL28-207ENST00000558815 TMEM181Q9P2C4 612 aa13.59□□□□□ -0.23
RPL28-207ENST00000558815 ING1Q9UK53 422 aaPredicted RBP13.59□□□□□ -0.23
RPL28-207ENST00000558815 NDUFAF1Q9Y375 327 aa13.59□□□□□ -0.23
RPL28-207ENST00000558815 FREM1Q5H8C1 2179 aa13.58□□□□□ -0.24
RPL28-207ENST00000558815 TRBV5-3A0A0A0MS03 114 aa13.58□□□□□ -0.24
RPL28-207ENST00000558815 FAAHO00519 579 aa13.58□□□□□ -0.24
RPL28-207ENST00000558815 RAMP1O60894 148 aa13.58□□□□□ -0.24
RPL28-207ENST00000558815 IGHV3-9P01782 118 aa13.58□□□□□ -0.24
RPL28-207ENST00000558815 THBDP07204 575 aa13.58□□□□□ -0.24
RPL28-207ENST00000558815 VIMP08670 466 aaKnown RBP13.58□□□□□ -0.24
RPL28-207ENST00000558815 TROVE2P10155 538 aaKnown RBP eCLIP13.58□□□□□ -0.24
RPL28-207ENST00000558815 IMPDH2P12268 514 aa13.58□□□□□ -0.24
RPL28-207ENST00000558815 PPP3CBP16298 524 aa13.58□□□□□ -0.24
RPL28-207ENST00000558815 PSMB1P20618 241 aaKnown RBP13.58□□□□□ -0.24
RPL28-207ENST00000558815 FPR1P21462 350 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms