RNA–Protein interactions for RNA: ENST00000558440.5

ZEB1-211, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 1 (best)

Gene ZEB1, Length 886 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-211ENST00000558440 VSX1Q9NZR4 365 aaPredicted RBP5.33□□□□□ -1.56
ZEB1-211ENST00000558440 CPSF2Q9P2I0 782 aaKnown RBP5.33□□□□□ -1.56
ZEB1-211ENST00000558440 XPR1Q9UBH6 696 aa5.33□□□□□ -1.56
ZEB1-211ENST00000558440 MRTO4Q9UKD2 239 aaKnown RBP5.33□□□□□ -1.56
ZEB1-211ENST00000558440 SLC12A4Q9UP95 1085 aa5.33□□□□□ -1.56
ZEB1-211ENST00000558440 TCRBV9S1A1TA0A576 114 aa5.32□□□□□ -1.56
ZEB1-211ENST00000558440 CCDC189A1A4V9 331 aa5.32□□□□□ -1.56
ZEB1-211ENST00000558440 FAM159BA6NKW6 160 aa5.32□□□□□ -1.56
ZEB1-211ENST00000558440 OR7A17O14581 309 aa5.32□□□□□ -1.56
ZEB1-211ENST00000558440 CXCL13O43927 109 aa5.32□□□□□ -1.56
ZEB1-211ENST00000558440 GMFGO60234 142 aa5.32□□□□□ -1.56
ZEB1-211ENST00000558440 FADS1O60427 444 aa5.32□□□□□ -1.56
ZEB1-211ENST00000558440 COQ9O75208 318 aa5.32□□□□□ -1.56
ZEB1-211ENST00000558440 PROP1O75360 226 aa5.32□□□□□ -1.56
ZEB1-211ENST00000558440 NME6O75414 186 aaPredicted RBP5.32□□□□□ -1.56
ZEB1-211ENST00000558440 SIX3O95343 332 aaPredicted RBP5.32□□□□□ -1.56
ZEB1-211ENST00000558440 CD8AP01732 235 aa5.32□□□□□ -1.56
ZEB1-211ENST00000558440 PABPC4LP0CB38 370 aaKnown RBP5.32□□□□□ -1.56
ZEB1-211ENST00000558440 SLC25A16P16260 332 aa5.32□□□□□ -1.56
ZEB1-211ENST00000558440 ZNF17P17021 662 aa5.32□□□□□ -1.56
ZEB1-211ENST00000558440 HNF1AP20823 631 aa5.32□□□□□ -1.56
ZEB1-211ENST00000558440 ME2P23368 584 aa5.32□□□□□ -1.56
ZEB1-211ENST00000558440 AGTR1P30556 359 aa5.32□□□□□ -1.56
ZEB1-211ENST00000558440 RFX3P48380 749 aa5.32□□□□□ -1.56
ZEB1-211ENST00000558440 PSMD4P55036 377 aaKnown RBP5.32□□□□□ -1.56
ZEB1-211ENST00000558440 CDH11P55287 796 aa5.32□□□□□ -1.56
ZEB1-211ENST00000558440 TRA2BP62995 288 aaKnown RBP5.32□□□□□ -1.56
ZEB1-211ENST00000558440 RUNX1T1Q06455 604 aa5.32□□□□□ -1.56
ZEB1-211ENST00000558440 LOXL1Q08397 574 aaPredicted RBP5.32□□□□□ -1.56
ZEB1-211ENST00000558440 C17orf67Q0P5P2 114 aa5.32□□□□□ -1.56
ZEB1-211ENST00000558440 RAB39AQ14964 217 aa5.32□□□□□ -1.56
ZEB1-211ENST00000558440 ACAP2Q15057 778 aa5.32□□□□□ -1.56
ZEB1-211ENST00000558440 TSC22D1Q15714 1073 aa5.32□□□□□ -1.56
ZEB1-211ENST00000558440 TAB1Q15750 504 aa5.32□□□□□ -1.56
ZEB1-211ENST00000558440 AGAP6Q5VW22 663 aa5.32□□□□□ -1.56
ZEB1-211ENST00000558440 LIPNQ5VXI9 398 aa5.32□□□□□ -1.56
ZEB1-211ENST00000558440 CCDC91Q7Z6B0 441 aa5.32□□□□□ -1.56
ZEB1-211ENST00000558440 GALNT10Q86SR1 603 aa5.32□□□□□ -1.56
ZEB1-211ENST00000558440 MARCH3Q86UD3 253 aa5.32□□□□□ -1.56
ZEB1-211ENST00000558440 DTX2Q86UW9 622 aa5.32□□□□□ -1.56
ZEB1-211ENST00000558440 CCDC25Q86WR0 208 aa5.32□□□□□ -1.56
ZEB1-211ENST00000558440 FAM9CQ8IZT9 166 aa5.32□□□□□ -1.56
ZEB1-211ENST00000558440 SLC35F6Q8N357 371 aa5.32□□□□□ -1.56
ZEB1-211ENST00000558440 CEP112Q8N8E3 955 aa5.32□□□□□ -1.56
ZEB1-211ENST00000558440 BANPQ8N9N5 519 aa5.32□□□□□ -1.56
ZEB1-211ENST00000558440 OR2V1Q8NHB1 315 aa5.32□□□□□ -1.56
ZEB1-211ENST00000558440 ROBO4Q8WZ75 1007 aa5.32□□□□□ -1.56
ZEB1-211ENST00000558440 EXOSC8Q96B26 276 aaKnown RBP5.32□□□□□ -1.56
ZEB1-211ENST00000558440 TM4SF18Q96CE8 201 aa5.32□□□□□ -1.56
ZEB1-211ENST00000558440 MRGPRX4Q96LA9 322 aa5.32□□□□□ -1.56
ZEB1-211ENST00000558440 ZNF681Q96N22 645 aa5.32□□□□□ -1.56
ZEB1-211ENST00000558440 POTEKPQ9BYX7 375 aa5.32□□□□□ -1.56
ZEB1-211ENST00000558440 TRIM2Q9C040 744 aa5.32□□□□□ -1.56
ZEB1-211ENST00000558440 HHATLQ9HCP6 504 aa5.32□□□□□ -1.56
ZEB1-211ENST00000558440 KCNS2Q9ULS6 477 aa5.32□□□□□ -1.56
ZEB1-211ENST00000558440 SNX12Q9UMY4 172 aa5.32□□□□□ -1.56
ZEB1-211ENST00000558440 VDAC3Q9Y277 283 aa5.32□□□□□ -1.56
ZEB1-211ENST00000558440 B3GALT5Q9Y2C3 310 aa5.32□□□□□ -1.56
ZEB1-211ENST00000558440 A0A087WZY1 265 aa5.31□□□□□ -1.56
ZEB1-211ENST00000558440 A0A096LNT2 108 aa5.31□□□□□ -1.56
ZEB1-211ENST00000558440 GNG14A0A1W2PPG7 69 aa5.31□□□□□ -1.56
ZEB1-211ENST00000558440 DPRXA6NFQ7 191 aa5.31□□□□□ -1.56
ZEB1-211ENST00000558440 TNFSF11O14788 317 aa5.31□□□□□ -1.56
ZEB1-211ENST00000558440 EIF3HO15372 352 aaKnown RBP eCLIP5.31□□□□□ -1.56
ZEB1-211ENST00000558440 MPPED1O15442 326 aa5.31□□□□□ -1.56
ZEB1-211ENST00000558440 PLOD3O60568 738 aa5.31□□□□□ -1.56
ZEB1-211ENST00000558440 LMX1BO60663 402 aa5.31□□□□□ -1.56
ZEB1-211ENST00000558440 SLC43A1O75387 559 aa5.31□□□□□ -1.56
ZEB1-211ENST00000558440 RBMXL2O75526 392 aaKnown RBP5.31□□□□□ -1.56
ZEB1-211ENST00000558440 GCM2O75603 506 aaPredicted RBP5.31□□□□□ -1.56
ZEB1-211ENST00000558440 KLHL2O95198 593 aa5.31□□□□□ -1.56
ZEB1-211ENST00000558440 ANGPTL1O95841 491 aa5.31□□□□□ -1.56
ZEB1-211ENST00000558440 ADAP00813 363 aa5.31□□□□□ -1.56
ZEB1-211ENST00000558440 PDYNP01213 254 aa5.31□□□□□ -1.56
ZEB1-211ENST00000558440 OPN1LWP04000 364 aa5.31□□□□□ -1.56
ZEB1-211ENST00000558440 IL3P08700 152 aa5.31□□□□□ -1.56
ZEB1-211ENST00000558440 GSTA2P09210 222 aa5.31□□□□□ -1.56
ZEB1-211ENST00000558440 PTNP21246 168 aa5.31□□□□□ -1.56
ZEB1-211ENST00000558440 MPIP34949 423 aa5.31□□□□□ -1.56
ZEB1-211ENST00000558440 ZNF41P51814 821 aaPredicted RBP5.31□□□□□ -1.56
ZEB1-211ENST00000558440 RPS7P62081 194 aaKnown RBP5.31□□□□□ -1.56
ZEB1-211ENST00000558440 PSG6Q00889 435 aa5.31□□□□□ -1.56
ZEB1-211ENST00000558440 GALNT1Q10472 559 aaPredicted RBP5.31□□□□□ -1.56
ZEB1-211ENST00000558440 TRAF3Q13114 568 aa5.31□□□□□ -1.56
ZEB1-211ENST00000558440 CALCOCO2Q13137 446 aa5.31□□□□□ -1.56
ZEB1-211ENST00000558440 P2RY6Q15077 328 aa5.31□□□□□ -1.56
ZEB1-211ENST00000558440 RAB35Q15286 201 aa5.31□□□□□ -1.56
ZEB1-211ENST00000558440 RNPS1Q15287 305 aaKnown RBP5.31□□□□□ -1.56
ZEB1-211ENST00000558440 ZNHIT3Q15649 155 aaPredicted RBP5.31□□□□□ -1.56
ZEB1-211ENST00000558440 STK11Q15831 433 aa5.31□□□□□ -1.56
ZEB1-211ENST00000558440 GGTA1PQ4G0N0 100 aa5.31□□□□□ -1.56
ZEB1-211ENST00000558440 HBMQ6B0K9 141 aa5.31□□□□□ -1.56
ZEB1-211ENST00000558440 FAM166AQ6J272 317 aa5.31□□□□□ -1.56
ZEB1-211ENST00000558440 MFSD12Q6NUT3 480 aa5.31□□□□□ -1.56
ZEB1-211ENST00000558440 TFAP2EQ6VUC0 442 aa5.31□□□□□ -1.56
ZEB1-211ENST00000558440 C3orf62Q6ZUJ4 267 aa5.31□□□□□ -1.56
ZEB1-211ENST00000558440 IL17RELQ6ZVW7 336 aa5.31□□□□□ -1.56
ZEB1-211ENST00000558440 CYS1Q717R9 158 aa5.31□□□□□ -1.56
ZEB1-211ENST00000558440 BHLHA15Q7RTS1 189 aaPredicted RBP5.31□□□□□ -1.56
ZEB1-211ENST00000558440 LRRC8AQ8IWT6 810 aa5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms