RNA–Protein interactions for RNA: ENST00000558314.5

TPM1-211, Transcript of tropomyosin 1, humanhuman

TSL 1 (best)

Gene TPM1, Length 1,031 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-211ENST00000558314 PARD6BQ9BYG5 372 aa13.74□□□□□ -0.21
TPM1-211ENST00000558314 CISD1Q9NZ45 108 aaKnown RBP13.74□□□□□ -0.21
TPM1-211ENST00000558314 POU2F3Q9UKI9 436 aa13.74□□□□□ -0.21
TPM1-211ENST00000558314 TLN2Q9Y4G6 2542 aa13.73□□□□□ -0.21
TPM1-211ENST00000558314 HIVEP2P31629 2446 aa13.73□□□□□ -0.21
TPM1-211ENST00000558314 NSD1Q96L73 2696 aaPredicted RBP13.73□□□□□ -0.21
TPM1-211ENST00000558314 ZNF724A8MTY0 619 aa13.73□□□□□ -0.21
TPM1-211ENST00000558314 AP3D1O14617 1153 aa13.73□□□□□ -0.21
TPM1-211ENST00000558314 ABCD4O14678 606 aa13.73□□□□□ -0.21
TPM1-211ENST00000558314 TM9SF1O15321 606 aa13.73□□□□□ -0.21
TPM1-211ENST00000558314 SCN2BO60939 215 aa13.73□□□□□ -0.21
TPM1-211ENST00000558314 NDUFS7O75251 213 aa13.73□□□□□ -0.21
TPM1-211ENST00000558314 KITP10721 976 aa13.73□□□□□ -0.21
TPM1-211ENST00000558314 IDUAP35475 653 aa13.73□□□□□ -0.21
TPM1-211ENST00000558314 ACVR1BP36896 505 aa13.73□□□□□ -0.21
TPM1-211ENST00000558314 KCNJ10P78508 379 aa13.73□□□□□ -0.21
TPM1-211ENST00000558314 CASP8Q14790 479 aa13.73□□□□□ -0.21
TPM1-211ENST00000558314 SYPL1Q16563 259 aa13.73□□□□□ -0.21
TPM1-211ENST00000558314 NXNQ6DKJ4 435 aa13.73□□□□□ -0.21
TPM1-211ENST00000558314 DNAJC14Q6Y2X3 702 aaPredicted RBP13.73□□□□□ -0.21
TPM1-211ENST00000558314 GRINAQ7Z429 371 aa13.73□□□□□ -0.21
TPM1-211ENST00000558314 PRIMA1Q86XR5 153 aa13.73□□□□□ -0.21
TPM1-211ENST00000558314 MIPOL1Q8TD10 442 aa13.73□□□□□ -0.21
TPM1-211ENST00000558314 CNOT9Q92600 299 aaKnown RBP13.73□□□□□ -0.21
TPM1-211ENST00000558314 TESCQ96BS2 214 aa13.73□□□□□ -0.21
TPM1-211ENST00000558314 NEURL3Q96EH8 262 aa13.73□□□□□ -0.21
TPM1-211ENST00000558314 TEX37Q96LM6 180 aa13.73□□□□□ -0.21
TPM1-211ENST00000558314 PANX1Q96RD7 426 aa13.73□□□□□ -0.21
TPM1-211ENST00000558314 ZBTB18Q99592 522 aa13.73□□□□□ -0.21
TPM1-211ENST00000558314 INPP5KQ9BT40 448 aa13.73□□□□□ -0.21
TPM1-211ENST00000558314 CCDC106Q9BWC9 280 aa13.73□□□□□ -0.21
TPM1-211ENST00000558314 POLE3Q9NRF9 147 aa13.73□□□□□ -0.21
TPM1-211ENST00000558314 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.73□□□□□ -0.21
TPM1-211ENST00000558314 JMJD1CQ15652 2540 aa13.73□□□□□ -0.21
TPM1-211ENST00000558314 PRAMEF27A3QJZ7 478 aa13.72□□□□□ -0.21
TPM1-211ENST00000558314 CCDC154A6NI56 674 aa13.72□□□□□ -0.21
TPM1-211ENST00000558314 M0R1B8 84 aa13.72□□□□□ -0.21
TPM1-211ENST00000558314 ETV2O00321 342 aaPredicted RBP13.72□□□□□ -0.21
TPM1-211ENST00000558314 HMGN4O00479 90 aa13.72□□□□□ -0.21
TPM1-211ENST00000558314 ANKRD28O15084 1053 aa13.72□□□□□ -0.21
TPM1-211ENST00000558314 TMCC2O75069 709 aa13.72□□□□□ -0.21
TPM1-211ENST00000558314 MRPL33O75394 65 aaKnown RBP13.72□□□□□ -0.21
TPM1-211ENST00000558314 DANCRP0C864 163 aa13.72□□□□□ -0.21
TPM1-211ENST00000558314 NR2F1P10589 423 aa13.72□□□□□ -0.21
TPM1-211ENST00000558314 PAX1P15863 534 aa13.72□□□□□ -0.21
TPM1-211ENST00000558314 BST1Q10588 318 aa13.72□□□□□ -0.21
TPM1-211ENST00000558314 MPP2Q14168 576 aa13.72□□□□□ -0.21
TPM1-211ENST00000558314 ABLIM2Q6H8Q1 611 aa13.72□□□□□ -0.21
TPM1-211ENST00000558314 SLC22A25Q6T423 547 aa13.72□□□□□ -0.21
TPM1-211ENST00000558314 CASP12Q6UXS9 341 aa13.72□□□□□ -0.21
TPM1-211ENST00000558314 TRIML2Q8N7C3 387 aa13.72□□□□□ -0.21
TPM1-211ENST00000558314 ZNF433Q8N7K0 673 aaPredicted RBP13.72□□□□□ -0.21
TPM1-211ENST00000558314 PIGXQ8TBF5 258 aa13.72□□□□□ -0.21
TPM1-211ENST00000558314 OR52E6Q96RD3 313 aa13.72□□□□□ -0.21
TPM1-211ENST00000558314 USB1Q9BQ65 265 aaKnown RBP13.72□□□□□ -0.21
TPM1-211ENST00000558314 TRIM2Q9C040 744 aa13.72□□□□□ -0.21
TPM1-211ENST00000558314 WDR55Q9H6Y2 383 aaPredicted RBP13.72□□□□□ -0.21
TPM1-211ENST00000558314 NPAP1Q9NZP6 1156 aa13.72□□□□□ -0.21
TPM1-211ENST00000558314 GDF2Q9UK05 429 aaPredicted RBP13.72□□□□□ -0.21
TPM1-211ENST00000558314 TMED7-TICAM2A0A0A6YYA0 188 aa13.71□□□□□ -0.21
TPM1-211ENST00000558314 OR5H1A6NKK0 313 aa13.71□□□□□ -0.21
TPM1-211ENST00000558314 DNAJA2O60884 412 aa13.71□□□□□ -0.21
TPM1-211ENST00000558314 ADAM11O75078 769 aa13.71□□□□□ -0.21
TPM1-211ENST00000558314 TP53P04637 393 aaPredicted RBP13.71□□□□□ -0.21
TPM1-211ENST00000558314 CHRM4P08173 479 aa13.71□□□□□ -0.21
TPM1-211ENST00000558314 ALDOCP09972 364 aaKnown RBP13.71□□□□□ -0.21
TPM1-211ENST00000558314 IL7RP16871 459 aa13.71□□□□□ -0.21
TPM1-211ENST00000558314 EPHA3P29320 983 aa13.71□□□□□ -0.21
TPM1-211ENST00000558314 CDKN2CP42773 168 aa13.71□□□□□ -0.21
TPM1-211ENST00000558314 MAGEA8P43361 318 aa13.71□□□□□ -0.21
TPM1-211ENST00000558314 SPOCK1Q08629 439 aa13.71□□□□□ -0.21
TPM1-211ENST00000558314 DPY19L1Q2PZI1 675 aa13.71□□□□□ -0.21
TPM1-211ENST00000558314 PGGHGQ32M88 737 aa13.71□□□□□ -0.21
TPM1-211ENST00000558314 TIMM23BQ5SRD1 257 aa13.71□□□□□ -0.21
TPM1-211ENST00000558314 FBXW9Q5XUX1 488 aa13.71□□□□□ -0.21
TPM1-211ENST00000558314 ADGRG3Q86Y34 549 aa13.71□□□□□ -0.21
TPM1-211ENST00000558314 MREGQ8N565 214 aa13.71□□□□□ -0.21
TPM1-211ENST00000558314 FAM71CQ8NEG0 241 aa13.71□□□□□ -0.21
TPM1-211ENST00000558314 OR52E4Q8NGH9 312 aa13.71□□□□□ -0.21
TPM1-211ENST00000558314 WDR60Q8WVS4 1066 aa13.71□□□□□ -0.21
TPM1-211ENST00000558314 DDIT4LQ96D03 193 aa13.71□□□□□ -0.21
TPM1-211ENST00000558314 CCDC115Q96NT0 180 aa13.71□□□□□ -0.21
TPM1-211ENST00000558314 REG4Q9BYZ8 158 aa13.71□□□□□ -0.21
TPM1-211ENST00000558314 SLCO5A1Q9H2Y9 848 aa13.71□□□□□ -0.21
TPM1-211ENST00000558314 MEAF6Q9HAF1 191 aa13.71□□□□□ -0.21
TPM1-211ENST00000558314 SSU72Q9NP77 194 aaKnown RBP13.71□□□□□ -0.21
TPM1-211ENST00000558314 TMED7Q9Y3B3 224 aa13.71□□□□□ -0.21
TPM1-211ENST00000558314 HDGFL3Q9Y3E1 203 aa13.71□□□□□ -0.21
TPM1-211ENST00000558314 TMEM72A0PK05 275 aa13.7□□□□□ -0.22
TPM1-211ENST00000558314 SHISA9B4DS77 424 aa13.7□□□□□ -0.22
TPM1-211ENST00000558314 OVOL3O00110 214 aa13.7□□□□□ -0.22
TPM1-211ENST00000558314 SDHDO14521 159 aa13.7□□□□□ -0.22
TPM1-211ENST00000558314 GPR171O14626 319 aa13.7□□□□□ -0.22
TPM1-211ENST00000558314 SSX4O60224 188 aa13.7□□□□□ -0.22
TPM1-211ENST00000558314 PMS2P2O95744 297 aa13.7□□□□□ -0.22
TPM1-211ENST00000558314 IGHV4-39P01824 125 aa13.7□□□□□ -0.22
TPM1-211ENST00000558314 DHRS4L1P0CG22 281 aa13.7□□□□□ -0.22
TPM1-211ENST00000558314 CDH2P19022 906 aaPredicted RBP13.7□□□□□ -0.22
TPM1-211ENST00000558314 COX5AP20674 150 aa13.7□□□□□ -0.22
TPM1-211ENST00000558314 TACR3P29371 465 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms