RNA–Protein interactions for RNA: ENST00000557945.5

CASC4-204, Transcript of cancer susceptibility 4, humanhuman

TSL 1 (best)

Gene CASC4, Length 1,386 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-204ENST00000557945 SHC1P29353 583 aa19.16■□□□□ 0.66
CASC4-204ENST00000557945 IFNA8P32881 189 aa19.16■□□□□ 0.66
CASC4-204ENST00000557945 ERFP50548 548 aa19.16■□□□□ 0.66
CASC4-204ENST00000557945 TPD52P55327 224 aaPredicted RBP19.16■□□□□ 0.66
CASC4-204ENST00000557945 CLDN18P56856 261 aa19.16■□□□□ 0.66
CASC4-204ENST00000557945 PIN1Q13526 163 aaPredicted RBP19.16■□□□□ 0.66
CASC4-204ENST00000557945 TSPYL5Q86VY4 417 aaPredicted RBP19.16■□□□□ 0.66
CASC4-204ENST00000557945 CYP4Z1Q86W10 505 aa19.16■□□□□ 0.66
CASC4-204ENST00000557945 AQP12AQ8IXF9 295 aa19.16■□□□□ 0.66
CASC4-204ENST00000557945 PHF10Q8WUB8 498 aaKnown RBP19.16■□□□□ 0.66
CASC4-204ENST00000557945 SH3BGRL2Q9UJC5 107 aa19.16■□□□□ 0.66
CASC4-204ENST00000557945 SLC7A7Q9UM01 511 aa19.16■□□□□ 0.66
CASC4-204ENST00000557945 ZNF835Q9Y2P0 537 aa19.16■□□□□ 0.66
CASC4-204ENST00000557945 FAM32AQ9Y421 112 aaKnown RBP19.16■□□□□ 0.66
CASC4-204ENST00000557945 ENPP4Q9Y6X5 453 aa19.16■□□□□ 0.66
CASC4-204ENST00000557945 J3KTA2 159 aa19.15■□□□□ 0.66
CASC4-204ENST00000557945 OR5F1O95221 314 aa19.15■□□□□ 0.66
CASC4-204ENST00000557945 SLC7A1P30825 629 aa19.15■□□□□ 0.66
CASC4-204ENST00000557945 SUCLG1P53597 346 aaKnown RBP19.15■□□□□ 0.66
CASC4-204ENST00000557945 CASP6P55212 293 aa19.15■□□□□ 0.66
CASC4-204ENST00000557945 VLDLRP98155 873 aa19.15■□□□□ 0.66
CASC4-204ENST00000557945 FAM98BQ52LJ0 330 aaKnown RBP19.15■□□□□ 0.66
CASC4-204ENST00000557945 CHMP1BQ7LBR1 199 aa19.15■□□□□ 0.66
CASC4-204ENST00000557945 GGNQ86UU5 652 aa19.15■□□□□ 0.66
CASC4-204ENST00000557945 SLC25A43Q8WUT9 341 aaPredicted RBP19.15■□□□□ 0.66
CASC4-204ENST00000557945 SLC41A3Q96GZ6 507 aa19.15■□□□□ 0.66
CASC4-204ENST00000557945 C7orf34Q96L11 122 aa19.15■□□□□ 0.66
CASC4-204ENST00000557945 PRRC1Q96M27 445 aa19.15■□□□□ 0.66
CASC4-204ENST00000557945 KLHL15Q96M94 604 aa19.15■□□□□ 0.66
CASC4-204ENST00000557945 RAB3IPQ96QF0 476 aaPredicted RBP19.15■□□□□ 0.66
CASC4-204ENST00000557945 POLR2J2Q9GZM3 115 aaKnown RBP19.15■□□□□ 0.66
CASC4-204ENST00000557945 PRDM14Q9GZV8 571 aa19.15■□□□□ 0.66
CASC4-204ENST00000557945 POLR2J3Q9H1A7 115 aaKnown RBP19.15■□□□□ 0.66
CASC4-204ENST00000557945 C12orf10Q9HB07 376 aa19.15■□□□□ 0.66
CASC4-204ENST00000557945 NDUFAF4Q9P032 175 aa19.15■□□□□ 0.66
CASC4-204ENST00000557945 RIMS3Q9UJD0 308 aa19.15■□□□□ 0.66
CASC4-204ENST00000557945 GTF3C1Q12789 2109 aa19.14■□□□□ 0.66
CASC4-204ENST00000557945 ZNF462Q96JM2 2506 aa19.14■□□□□ 0.65
CASC4-204ENST00000557945 TRGV8A0A0C4DH27 118 aa19.14■□□□□ 0.65
CASC4-204ENST00000557945 SEMA7AO75326 666 aa19.14■□□□□ 0.65
CASC4-204ENST00000557945 SEMG1P04279 462 aa19.14■□□□□ 0.65
CASC4-204ENST00000557945 ITGA2P17301 1181 aa19.14■□□□□ 0.65
CASC4-204ENST00000557945 CHRNB3Q05901 458 aa19.14■□□□□ 0.65
CASC4-204ENST00000557945 SYT14P1Q58G82 188 aa19.14■□□□□ 0.65
CASC4-204ENST00000557945 SWT1Q5T5J6 900 aaKnown RBP19.14■□□□□ 0.65
CASC4-204ENST00000557945 GDF7Q7Z4P5 450 aa19.14■□□□□ 0.65
CASC4-204ENST00000557945 SLC38A4Q969I6 547 aa19.14■□□□□ 0.65
CASC4-204ENST00000557945 DDIT4LQ96D03 193 aa19.14■□□□□ 0.65
CASC4-204ENST00000557945 DNAJA3Q96EY1 480 aa19.14■□□□□ 0.65
CASC4-204ENST00000557945 RSRC1Q96IZ7 334 aaKnown RBP19.14■□□□□ 0.65
CASC4-204ENST00000557945 OR5B2Q96R09 309 aa19.14■□□□□ 0.65
CASC4-204ENST00000557945 FNDC11Q9BVV2 318 aa19.14■□□□□ 0.65
CASC4-204ENST00000557945 OR11A1Q9GZK7 315 aa19.14■□□□□ 0.65
CASC4-204ENST00000557945 RHCGQ9UBD6 479 aa19.14■□□□□ 0.65
CASC4-204ENST00000557945 TINAGQ9UJW2 476 aa19.14■□□□□ 0.65
CASC4-204ENST00000557945 A4GNTQ9UNA3 340 aa19.14■□□□□ 0.65
CASC4-204ENST00000557945 AURKCQ9UQB9 309 aa19.14■□□□□ 0.65
CASC4-204ENST00000557945 A0A0J9YW62 118 aa19.13■□□□□ 0.65
CASC4-204ENST00000557945 DHRS12A0PJE2 317 aa19.13■□□□□ 0.65
CASC4-204ENST00000557945 FIGNL2A6NMB9 653 aa19.13■□□□□ 0.65
CASC4-204ENST00000557945 TNFSF11O14788 317 aa19.13■□□□□ 0.65
CASC4-204ENST00000557945 ZNF208O43345 1280 aa19.13■□□□□ 0.65
CASC4-204ENST00000557945 CHP2O43745 196 aa19.13■□□□□ 0.65
CASC4-204ENST00000557945 DIRAS1O95057 198 aa19.13■□□□□ 0.65
CASC4-204ENST00000557945 THY1P04216 161 aa19.13■□□□□ 0.65
CASC4-204ENST00000557945 FABP3P05413 133 aa19.13■□□□□ 0.65
CASC4-204ENST00000557945 FKBP2P26885 142 aaKnown RBP19.13■□□□□ 0.65
CASC4-204ENST00000557945 EIF1AXP47813 144 aaKnown RBP19.13■□□□□ 0.65
CASC4-204ENST00000557945 UQCRFS1P47985 274 aa19.13■□□□□ 0.65
CASC4-204ENST00000557945 MAP2K6P52564 334 aa19.13■□□□□ 0.65
CASC4-204ENST00000557945 CLDN15P56746 228 aa19.13■□□□□ 0.65
CASC4-204ENST00000557945 RPS3AP61247 264 aaKnown RBP19.13■□□□□ 0.65
CASC4-204ENST00000557945 EIF2S3LQ2VIR3 472 aaKnown RBP19.13■□□□□ 0.65
CASC4-204ENST00000557945 EMC4Q5J8M3 183 aa19.13■□□□□ 0.65
CASC4-204ENST00000557945 PDSS1Q5T2R2 415 aa19.13■□□□□ 0.65
CASC4-204ENST00000557945 HBMQ6B0K9 141 aa19.13■□□□□ 0.65
CASC4-204ENST00000557945 C3P1Q6ZMU1 363 aa19.13■□□□□ 0.65
CASC4-204ENST00000557945 Q6ZPB1 254 aaPredicted RBP19.13■□□□□ 0.65
CASC4-204ENST00000557945 ESPNLQ6ZVH7 1005 aa19.13■□□□□ 0.65
CASC4-204ENST00000557945 DOLPP1Q86YN1 238 aa19.13■□□□□ 0.65
CASC4-204ENST00000557945 ZDHHC21Q8IVQ6 265 aa19.13■□□□□ 0.65
CASC4-204ENST00000557945 OR2V1Q8NHB1 315 aa19.13■□□□□ 0.65
CASC4-204ENST00000557945 PRR7Q8TB68 274 aa19.13■□□□□ 0.65
CASC4-204ENST00000557945 ZNF300Q96RE9 604 aaPredicted RBP19.13■□□□□ 0.65
CASC4-204ENST00000557945 MAGIXQ9H6Y5 334 aa19.13■□□□□ 0.65
CASC4-204ENST00000557945 IL1RAPQ9NPH3 570 aa19.13■□□□□ 0.65
CASC4-204ENST00000557945 A0A087WUJ7 227 aa19.12■□□□□ 0.65
CASC4-204ENST00000557945 A0A1W2PNR3 127 aa19.12■□□□□ 0.65
CASC4-204ENST00000557945 ZC3H12DA2A288 527 aaKnown RBP19.12■□□□□ 0.65
CASC4-204ENST00000557945 A8MVM7 634 aa19.12■□□□□ 0.65
CASC4-204ENST00000557945 AHRRA9YTQ3 701 aa19.12■□□□□ 0.65
CASC4-204ENST00000557945 MT-ND1P03886 318 aa19.12■□□□□ 0.65
CASC4-204ENST00000557945 NQO1P15559 274 aaKnown RBP19.12■□□□□ 0.65
CASC4-204ENST00000557945 PTNP21246 168 aa19.12■□□□□ 0.65
CASC4-204ENST00000557945 ST3GAL3Q11203 375 aa19.12■□□□□ 0.65
CASC4-204ENST00000557945 SGCBQ16585 318 aa19.12■□□□□ 0.65
CASC4-204ENST00000557945 CTU2Q2VPK5 515 aaKnown RBP19.12■□□□□ 0.65
CASC4-204ENST00000557945 TSEN54Q7Z6J9 526 aaKnown RBP19.12■□□□□ 0.65
CASC4-204ENST00000557945 P3H2Q8IVL5 708 aa19.12■□□□□ 0.65
CASC4-204ENST00000557945 ADGRG5Q8IZF4 528 aa19.12■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms