RNA–Protein interactions for RNA: ENST00000557866.1

SPG11-204, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 2

Gene SPG11, Length 468 nt, Biotype non stop decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-204ENST00000557866 TMPRSS11FQ6ZWK6 438 aa6.73□□□□□ -1.33
SPG11-204ENST00000557866 AHSA2Q719I0 299 aa6.73□□□□□ -1.33
SPG11-204ENST00000557866 RRM2BQ7LG56 351 aa6.73□□□□□ -1.33
SPG11-204ENST00000557866 TIPARPQ7Z3E1 657 aaKnown RBP6.73□□□□□ -1.33
SPG11-204ENST00000557866 PIP4P1Q86T03 277 aa6.73□□□□□ -1.33
SPG11-204ENST00000557866 MARCH3Q86UD3 253 aa6.73□□□□□ -1.33
SPG11-204ENST00000557866 ZNF440Q8IYI8 595 aa6.73□□□□□ -1.33
SPG11-204ENST00000557866 CADM2Q8N3J6 435 aa6.73□□□□□ -1.33
SPG11-204ENST00000557866 CLDN22Q8N7P3 220 aa6.73□□□□□ -1.33
SPG11-204ENST00000557866 TCEANCQ8N8B7 351 aa6.73□□□□□ -1.33
SPG11-204ENST00000557866 ZNF540Q8NDQ6 660 aa6.73□□□□□ -1.33
SPG11-204ENST00000557866 OR13F1Q8NGS4 319 aa6.73□□□□□ -1.33
SPG11-204ENST00000557866 NUBPLQ8TB37 319 aa6.73□□□□□ -1.33
SPG11-204ENST00000557866 PHOSPHO1Q8TCT1 267 aa6.73□□□□□ -1.33
SPG11-204ENST00000557866 THAP3Q8WTV1 239 aaPredicted RBP6.73□□□□□ -1.33
SPG11-204ENST00000557866 TRUB1Q8WWH5 349 aaKnown RBP6.73□□□□□ -1.33
SPG11-204ENST00000557866 IPCEF1Q8WWN9 437 aaPredicted RBP6.73□□□□□ -1.33
SPG11-204ENST00000557866 METTL21AQ8WXB1 218 aa6.73□□□□□ -1.33
SPG11-204ENST00000557866 C3orf49Q96BT1 292 aa6.73□□□□□ -1.33
SPG11-204ENST00000557866 VMP1Q96GC9 406 aa6.73□□□□□ -1.33
SPG11-204ENST00000557866 SAMD8Q96LT4 415 aa6.73□□□□□ -1.33
SPG11-204ENST00000557866 HS6ST2Q96MM7 605 aa6.73□□□□□ -1.33
SPG11-204ENST00000557866 CMKLR1Q99788 373 aa6.73□□□□□ -1.33
SPG11-204ENST00000557866 TSSK6Q9BXA6 273 aa6.73□□□□□ -1.33
SPG11-204ENST00000557866 DPH1Q9BZG8 443 aa6.73□□□□□ -1.33
SPG11-204ENST00000557866 ULBP3Q9BZM4 244 aa6.73□□□□□ -1.33
SPG11-204ENST00000557866 SPRY4Q9C004 299 aa6.73□□□□□ -1.33
SPG11-204ENST00000557866 YIPF3Q9GZM5 350 aa6.73□□□□□ -1.33
SPG11-204ENST00000557866 LAT2Q9GZY6 243 aa6.73□□□□□ -1.33
SPG11-204ENST00000557866 WDR54Q9H977 334 aa6.73□□□□□ -1.33
SPG11-204ENST00000557866 EXOSC3Q9NQT5 275 aaKnown RBP6.73□□□□□ -1.33
SPG11-204ENST00000557866 SCN3BQ9NY72 215 aa6.73□□□□□ -1.33
SPG11-204ENST00000557866 IL20Q9NYY1 176 aa6.73□□□□□ -1.33
SPG11-204ENST00000557866 TVP23BQ9NYZ1 205 aa6.73□□□□□ -1.33
SPG11-204ENST00000557866 DNAJC27Q9NZQ0 273 aa6.73□□□□□ -1.33
SPG11-204ENST00000557866 MRTO4Q9UKD2 239 aaKnown RBP6.73□□□□□ -1.33
SPG11-204ENST00000557866 ICAM5Q9UMF0 924 aa6.73□□□□□ -1.33
SPG11-204ENST00000557866 PCDHGB1Q9Y5G3 927 aa6.73□□□□□ -1.33
SPG11-204ENST00000557866 CDH10Q9Y6N8 788 aa6.73□□□□□ -1.33
SPG11-204ENST00000557866 WDFY3Q8IZQ1 3526 aa6.72□□□□□ -1.33
SPG11-204ENST00000557866 IGKV1D-42A0A075B6H8 117 aa6.72□□□□□ -1.33
SPG11-204ENST00000557866 A0A087WUJ7 227 aa6.72□□□□□ -1.33
SPG11-204ENST00000557866 A0A1W2PQD3 144 aa6.72□□□□□ -1.33
SPG11-204ENST00000557866 SH3D21A4FU49 640 aa6.72□□□□□ -1.33
SPG11-204ENST00000557866 OR6C70A6NIJ9 312 aa6.72□□□□□ -1.33
SPG11-204ENST00000557866 CLCA1A8K7I4 914 aa6.72□□□□□ -1.33
SPG11-204ENST00000557866 PRR33A8MZF0 331 aa6.72□□□□□ -1.33
SPG11-204ENST00000557866 B4DXG7 233 aa6.72□□□□□ -1.33
SPG11-204ENST00000557866 GTPBP1O00178 669 aaKnown RBP6.72□□□□□ -1.33
SPG11-204ENST00000557866 WWP2O00308 870 aa6.72□□□□□ -1.33
SPG11-204ENST00000557866 ZNF264O43296 627 aa6.72□□□□□ -1.33
SPG11-204ENST00000557866 RGS10O43665 173 aa6.72□□□□□ -1.33
SPG11-204ENST00000557866 TLX2O43763 284 aaPredicted RBP6.72□□□□□ -1.33
SPG11-204ENST00000557866 MPZL2O60487 215 aa6.72□□□□□ -1.33
SPG11-204ENST00000557866 MRPS14O60783 128 aaKnown RBP6.72□□□□□ -1.33
SPG11-204ENST00000557866 CSO75390 466 aaKnown RBP6.72□□□□□ -1.33
SPG11-204ENST00000557866 PPM1BO75688 479 aa6.72□□□□□ -1.33
SPG11-204ENST00000557866 ZFAND5O76080 213 aa6.72□□□□□ -1.33
SPG11-204ENST00000557866 STK17BO94768 372 aa6.72□□□□□ -1.33
SPG11-204ENST00000557866 CDK1P06493 297 aa6.72□□□□□ -1.33
SPG11-204ENST00000557866 KLK3P07288 261 aaPredicted RBP6.72□□□□□ -1.33
SPG11-204ENST00000557866 STSP08842 583 aa6.72□□□□□ -1.33
SPG11-204ENST00000557866 IFI30P13284 250 aa6.72□□□□□ -1.33
SPG11-204ENST00000557866 EVI2BP34910 448 aa6.72□□□□□ -1.33
SPG11-204ENST00000557866 RBM34P42696 430 aaKnown RBP6.72□□□□□ -1.33
SPG11-204ENST00000557866 SMSP52788 366 aa6.72□□□□□ -1.33
SPG11-204ENST00000557866 PNLIPRP2P54317 469 aa6.72□□□□□ -1.33
SPG11-204ENST00000557866 GAS1P54826 345 aa6.72□□□□□ -1.33
SPG11-204ENST00000557866 MLLT10P55197 1068 aa6.72□□□□□ -1.33
SPG11-204ENST00000557866 FBXW4P57775 412 aa6.72□□□□□ -1.33
SPG11-204ENST00000557866 ZNF117Q03924 483 aa6.72□□□□□ -1.33
SPG11-204ENST00000557866 IRF3Q14653 427 aa6.72□□□□□ -1.33
SPG11-204ENST00000557866 PGGHGQ32M88 737 aa6.72□□□□□ -1.33
SPG11-204ENST00000557866 SLC25A30Q5SVS4 291 aa6.72□□□□□ -1.33
SPG11-204ENST00000557866 DCAF12Q5T6F0 453 aa6.72□□□□□ -1.33
SPG11-204ENST00000557866 SLC30A6Q6NXT4 461 aa6.72□□□□□ -1.33
SPG11-204ENST00000557866 ULK3Q6PHR2 472 aa6.72□□□□□ -1.33
SPG11-204ENST00000557866 PRSS48Q7RTY5 328 aa6.72□□□□□ -1.33
SPG11-204ENST00000557866 GPR141Q7Z602 305 aa6.72□□□□□ -1.33
SPG11-204ENST00000557866 ATG4DQ86TL0 474 aaPredicted RBP6.72□□□□□ -1.33
SPG11-204ENST00000557866 CLVS1Q8IUQ0 354 aaPredicted RBP6.72□□□□□ -1.33
SPG11-204ENST00000557866 FAM26EQ8N5C1 309 aa6.72□□□□□ -1.33
SPG11-204ENST00000557866 ZNF527Q8NB42 609 aa6.72□□□□□ -1.33
SPG11-204ENST00000557866 PRSS33Q8NF86 280 aa6.72□□□□□ -1.33
SPG11-204ENST00000557866 OR8J1Q8NGP2 316 aa6.72□□□□□ -1.33
SPG11-204ENST00000557866 OR13C2Q8NGS9 318 aa6.72□□□□□ -1.33
SPG11-204ENST00000557866 OR8K3Q8NH51 312 aa6.72□□□□□ -1.33
SPG11-204ENST00000557866 TEX47Q8TBZ9 253 aa6.72□□□□□ -1.33
SPG11-204ENST00000557866 BRIX1Q8TDN6 353 aaKnown RBP6.72□□□□□ -1.33
SPG11-204ENST00000557866 RNF138Q8WVD3 245 aa6.72□□□□□ -1.33
SPG11-204ENST00000557866 OSTF1Q92882 214 aa6.72□□□□□ -1.33
SPG11-204ENST00000557866 HGDQ93099 445 aa6.72□□□□□ -1.33
SPG11-204ENST00000557866 SH3YL1Q96HL8 342 aaPredicted RBP6.72□□□□□ -1.33
SPG11-204ENST00000557866 MPP4Q96JB8 637 aa6.72□□□□□ -1.33
SPG11-204ENST00000557866 IMMP1LQ96LU5 166 aa6.72□□□□□ -1.33
SPG11-204ENST00000557866 ZNF582Q96NG8 517 aaPredicted RBP6.72□□□□□ -1.33
SPG11-204ENST00000557866 LPAR4Q99677 370 aa6.72□□□□□ -1.33
SPG11-204ENST00000557866 CDC6Q99741 560 aa6.72□□□□□ -1.33
SPG11-204ENST00000557866 TUBA1CQ9BQE3 449 aa6.72□□□□□ -1.33
SPG11-204ENST00000557866 COPS4Q9BT78 406 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 117.7 ms