RNA–Protein interactions for RNA: ENST00000557703.5

SHMT2-234, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 542 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-234ENST00000557703 CLDN15P56746 228 aa12.31□□□□□ -0.44
SHMT2-234ENST00000557703 SLC25A3Q00325 362 aa12.31□□□□□ -0.44
SHMT2-234ENST00000557703 SRYQ05066 204 aa12.31□□□□□ -0.44
SHMT2-234ENST00000557703 PMPCAQ10713 525 aa12.31□□□□□ -0.44
SHMT2-234ENST00000557703 RNPS1Q15287 305 aaKnown RBP12.31□□□□□ -0.44
SHMT2-234ENST00000557703 CTU2Q2VPK5 515 aaKnown RBP12.31□□□□□ -0.44
SHMT2-234ENST00000557703 TMEM176BQ3YBM2 270 aaPredicted RBP12.31□□□□□ -0.44
SHMT2-234ENST00000557703 DNAL1Q4LDG9 190 aa12.31□□□□□ -0.44
SHMT2-234ENST00000557703 MTX3Q5HYI7 312 aa12.31□□□□□ -0.44
SHMT2-234ENST00000557703 HBMQ6B0K9 141 aa12.31□□□□□ -0.44
SHMT2-234ENST00000557703 TMPPEQ6ZT21 453 aa12.31□□□□□ -0.44
SHMT2-234ENST00000557703 MAMDC2Q7Z304 686 aaPredicted RBP12.31□□□□□ -0.44
SHMT2-234ENST00000557703 DEFB107AQ8IZN7 70 aa12.31□□□□□ -0.44
SHMT2-234ENST00000557703 RBM15BQ8NDT2 890 aaKnown RBP12.31□□□□□ -0.44
SHMT2-234ENST00000557703 OSTF1Q92882 214 aa12.31□□□□□ -0.44
SHMT2-234ENST00000557703 ZHX1-C8orf76Q96EF9 292 aa12.31□□□□□ -0.44
SHMT2-234ENST00000557703 SLC47A1Q96FL8 570 aa12.31□□□□□ -0.44
SHMT2-234ENST00000557703 MPP4Q96JB8 637 aa12.31□□□□□ -0.44
SHMT2-234ENST00000557703 CTPS2Q9NRF8 586 aa12.31□□□□□ -0.44
SHMT2-234ENST00000557703 TNFRSF10DQ9UBN6 386 aa12.31□□□□□ -0.44
SHMT2-234ENST00000557703 SAMD4AQ9UPU9 718 aaKnown RBP12.31□□□□□ -0.44
SHMT2-234ENST00000557703 KLF2Q9Y5W3 355 aaPredicted RBP12.31□□□□□ -0.44
SHMT2-234ENST00000557703 ARHGAP21Q5T5U3 1957 aa12.3□□□□□ -0.44
SHMT2-234ENST00000557703 TMED7-TICAM2A0A0A6YYA0 188 aa12.3□□□□□ -0.44
SHMT2-234ENST00000557703 A8MVM7 634 aa12.3□□□□□ -0.44
SHMT2-234ENST00000557703 OR2T1O43869 369 aa12.3□□□□□ -0.44
SHMT2-234ENST00000557703 EFNA2O43921 213 aa12.3□□□□□ -0.44
SHMT2-234ENST00000557703 OPRM1P35372 400 aa12.3□□□□□ -0.44
SHMT2-234ENST00000557703 PCYT1AP49585 367 aa12.3□□□□□ -0.44
SHMT2-234ENST00000557703 SUCLG1P53597 346 aaKnown RBP12.3□□□□□ -0.44
SHMT2-234ENST00000557703 CLDN20P56880 219 aa12.3□□□□□ -0.44
SHMT2-234ENST00000557703 MFSD13AQ14CX5 517 aa12.3□□□□□ -0.44
SHMT2-234ENST00000557703 SLC25A35Q3KQZ1 300 aa12.3□□□□□ -0.44
SHMT2-234ENST00000557703 CYBRD1Q53TN4 286 aa12.3□□□□□ -0.44
SHMT2-234ENST00000557703 GLYATQ6IB77 296 aa12.3□□□□□ -0.44
SHMT2-234ENST00000557703 CBLL1Q75N03 491 aa12.3□□□□□ -0.44
SHMT2-234ENST00000557703 HMGN2P46Q86SG4 172 aa12.3□□□□□ -0.44
SHMT2-234ENST00000557703 UBQLNLQ8IYU4 475 aa12.3□□□□□ -0.44
SHMT2-234ENST00000557703 SMYD1Q8NB12 490 aa12.3□□□□□ -0.44
SHMT2-234ENST00000557703 GPR32P1Q8NGA4 272 aa12.3□□□□□ -0.44
SHMT2-234ENST00000557703 OR6S1Q8NH40 331 aa12.3□□□□□ -0.44
SHMT2-234ENST00000557703 OR10D3Q8NH80 312 aa12.3□□□□□ -0.44
SHMT2-234ENST00000557703 LILRB4Q8NHJ6 448 aa12.3□□□□□ -0.44
SHMT2-234ENST00000557703 FIG4Q92562 907 aa12.3□□□□□ -0.44
SHMT2-234ENST00000557703 SLC38A4Q969I6 547 aa12.3□□□□□ -0.44
SHMT2-234ENST00000557703 C3orf49Q96BT1 292 aa12.3□□□□□ -0.44
SHMT2-234ENST00000557703 LRRC46Q96FV0 321 aa12.3□□□□□ -0.44
SHMT2-234ENST00000557703 TRIB1Q96RU8 372 aa12.3□□□□□ -0.44
SHMT2-234ENST00000557703 SFXN3Q9BWM7 321 aa12.3□□□□□ -0.44
SHMT2-234ENST00000557703 TAS2R1Q9NYW7 299 aa12.3□□□□□ -0.44
SHMT2-234ENST00000557703 SH3BGRL2Q9UJC5 107 aa12.3□□□□□ -0.44
SHMT2-234ENST00000557703 TMED7Q9Y3B3 224 aa12.3□□□□□ -0.44
SHMT2-234ENST00000557703 A0A0J9YW62 118 aa12.29□□□□□ -0.44
SHMT2-234ENST00000557703 SULT2B1O00204 365 aa12.29□□□□□ -0.44
SHMT2-234ENST00000557703 DVL2O14641 736 aa12.29□□□□□ -0.44
SHMT2-234ENST00000557703 CTSSP25774 331 aa12.29□□□□□ -0.44
SHMT2-234ENST00000557703 PEX19P40855 299 aa12.29□□□□□ -0.44
SHMT2-234ENST00000557703 EIF1AXP47813 144 aaKnown RBP12.29□□□□□ -0.44
SHMT2-234ENST00000557703 RNF144AP50876 292 aaPredicted RBP12.29□□□□□ -0.44
SHMT2-234ENST00000557703 AGFG1P52594 562 aaKnown RBP12.29□□□□□ -0.44
SHMT2-234ENST00000557703 CRYBA2P53672 197 aa12.29□□□□□ -0.44
SHMT2-234ENST00000557703 NUP107P57740 925 aa12.29□□□□□ -0.44
SHMT2-234ENST00000557703 PDK3Q15120 406 aa12.29□□□□□ -0.44
SHMT2-234ENST00000557703 GLIPR1L2Q4G1C9 344 aa12.29□□□□□ -0.44
SHMT2-234ENST00000557703 LRRC23Q53EV4 343 aaPredicted RBP12.29□□□□□ -0.44
SHMT2-234ENST00000557703 ALG10BQ5I7T1 473 aa12.29□□□□□ -0.44
SHMT2-234ENST00000557703 P4HA3Q7Z4N8 544 aa12.29□□□□□ -0.44
SHMT2-234ENST00000557703 MRGPRGQ86SM5 289 aa12.29□□□□□ -0.44
SHMT2-234ENST00000557703 ATG4DQ86TL0 474 aaPredicted RBP12.29□□□□□ -0.44
SHMT2-234ENST00000557703 CADM2Q8N3J6 435 aa12.29□□□□□ -0.44
SHMT2-234ENST00000557703 OR5M1Q8NGP8 315 aa12.29□□□□□ -0.44
SHMT2-234ENST00000557703 OR10Q1Q8NGQ4 319 aa12.29□□□□□ -0.44
SHMT2-234ENST00000557703 CA5BP1Q8WTZ4 195 aa12.29□□□□□ -0.44
SHMT2-234ENST00000557703 GEMIN6Q8WXD5 167 aaKnown RBP12.29□□□□□ -0.44
SHMT2-234ENST00000557703 EPYCQ99645 322 aa12.29□□□□□ -0.44
SHMT2-234ENST00000557703 MCHR1Q99705 422 aa12.29□□□□□ -0.44
SHMT2-234ENST00000557703 KLHDC3Q9BQ90 382 aa12.29□□□□□ -0.44
SHMT2-234ENST00000557703 SLC19A3Q9BZV2 496 aa12.29□□□□□ -0.44
SHMT2-234ENST00000557703 MMADHCQ9H3L0 296 aaPredicted RBP12.29□□□□□ -0.44
SHMT2-234ENST00000557703 RNF122Q9H9V4 155 aa12.29□□□□□ -0.44
SHMT2-234ENST00000557703 DCAF13Q9NV06 445 aaKnown RBP12.29□□□□□ -0.44
SHMT2-234ENST00000557703 ACTR3BQ9P1U1 418 aa12.29□□□□□ -0.44
SHMT2-234ENST00000557703 FOXD3Q9UJU5 478 aaPredicted RBP12.29□□□□□ -0.44
SHMT2-234ENST00000557703 SNX13Q9Y5W8 968 aa12.29□□□□□ -0.44
SHMT2-234ENST00000557703 INTS1Q8N201 2190 aaKnown RBP12.29□□□□□ -0.44
SHMT2-234ENST00000557703 DOCK7Q96N67 2140 aa12.28□□□□□ -0.44
SHMT2-234ENST00000557703 PTPN13Q12923 2485 aa12.28□□□□□ -0.44
SHMT2-234ENST00000557703 A0A087WUJ7 227 aa12.28□□□□□ -0.44
SHMT2-234ENST00000557703 A0A0B4J2E0 115 aa12.28□□□□□ -0.44
SHMT2-234ENST00000557703 A0A1B0GWA3 101 aa12.28□□□□□ -0.44
SHMT2-234ENST00000557703 A0A1B0GX12 115 aa12.28□□□□□ -0.44
SHMT2-234ENST00000557703 TRAPPC13A5PLN9 417 aa12.28□□□□□ -0.44
SHMT2-234ENST00000557703 ELOA3DA6NLF2 546 aaPredicted RBP12.28□□□□□ -0.44
SHMT2-234ENST00000557703 SHISA8B8ZZ34 492 aa12.28□□□□□ -0.44
SHMT2-234ENST00000557703 GYG2O15488 501 aa12.28□□□□□ -0.44
SHMT2-234ENST00000557703 SEC14L5O43304 696 aa12.28□□□□□ -0.44
SHMT2-234ENST00000557703 CHP2O43745 196 aa12.28□□□□□ -0.44
SHMT2-234ENST00000557703 NPIPB7O75200 414 aa12.28□□□□□ -0.44
SHMT2-234ENST00000557703 UBOX5O94941 541 aa12.28□□□□□ -0.44
SHMT2-234ENST00000557703 STAMBPO95630 424 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms