RNA–Protein interactions for RNA: ENST00000557548.1

TRAV28-201, Transcript of T cell receptor alpha variable 28 (pseudogene), humanhuman

BASIC

Gene TRAV28, Length 323 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV28-201ENST00000557548 ENPP6Q6UWR7 440 aa2.54□□□□□ -2
TRAV28-201ENST00000557548 C19orf35Q6ZS72 473 aa2.54□□□□□ -2
TRAV28-201ENST00000557548 LRRTM1Q86UE6 522 aa2.54□□□□□ -2
TRAV28-201ENST00000557548 TRIM69Q86WT6 500 aa2.54□□□□□ -2
TRAV28-201ENST00000557548 OR2L13Q8N349 312 aa2.54□□□□□ -2
TRAV28-201ENST00000557548 TCAIMQ8N3R3 496 aa2.54□□□□□ -2
TRAV28-201ENST00000557548 BEST4Q8NFU0 473 aa2.54□□□□□ -2
TRAV28-201ENST00000557548 OR2L3Q8NG85 312 aa2.54□□□□□ -2
TRAV28-201ENST00000557548 OR9A1PQ8NGU1 263 aa2.54□□□□□ -2
TRAV28-201ENST00000557548 OR4Q3Q8NH05 313 aa2.54□□□□□ -2
TRAV28-201ENST00000557548 ADAMTS16Q8TE57 1224 aa2.54□□□□□ -2
TRAV28-201ENST00000557548 DDI1Q8WTU0 396 aa2.54□□□□□ -2
TRAV28-201ENST00000557548 MCUR1Q96AQ8 359 aa2.54□□□□□ -2
TRAV28-201ENST00000557548 EFHD2Q96C19 240 aaPredicted RBP2.54□□□□□ -2
TRAV28-201ENST00000557548 TM4SF19Q96DZ7 209 aa2.54□□□□□ -2
TRAV28-201ENST00000557548 TMEM80Q96HE8 168 aa2.54□□□□□ -2
TRAV28-201ENST00000557548 ZNF597Q96LX8 424 aa2.54□□□□□ -2
TRAV28-201ENST00000557548 C9orf85Q96MD7 179 aa2.54□□□□□ -2
TRAV28-201ENST00000557548 CHP1Q99653 195 aa2.54□□□□□ -2
TRAV28-201ENST00000557548 DPH7Q9BTV6 452 aa2.54□□□□□ -2
TRAV28-201ENST00000557548 HCAR1Q9BXC0 346 aa2.54□□□□□ -2
TRAV28-201ENST00000557548 NSRP1Q9H0G5 558 aaKnown RBP2.54□□□□□ -2
TRAV28-201ENST00000557548 NARFLQ9H6Q4 476 aa2.54□□□□□ -2
TRAV28-201ENST00000557548 SYNDIG1Q9H7V2 258 aa2.54□□□□□ -2
TRAV28-201ENST00000557548 EXOSC3Q9NQT5 275 aaKnown RBP2.54□□□□□ -2
TRAV28-201ENST00000557548 AGPAT3Q9NRZ7 376 aa2.54□□□□□ -2
TRAV28-201ENST00000557548 PAK1IP1Q9NWT1 392 aaPredicted RBP2.54□□□□□ -2
TRAV28-201ENST00000557548 EHFQ9NZC4 300 aa2.54□□□□□ -2
TRAV28-201ENST00000557548 PRODH2Q9UF12 536 aa2.54□□□□□ -2
TRAV28-201ENST00000557548 ANGPTL2Q9UKU9 493 aa2.54□□□□□ -2
TRAV28-201ENST00000557548 ABCG2Q9UNQ0 655 aa2.54□□□□□ -2
TRAV28-201ENST00000557548 PDE10AQ9Y233 779 aa2.54□□□□□ -2
TRAV28-201ENST00000557548 CSDC2Q9Y534 153 aaKnown RBP2.54□□□□□ -2
TRAV28-201ENST00000557548 FER1L5A0AVI2 2057 aa2.54□□□□□ -2
TRAV28-201ENST00000557548 LAMC3Q9Y6N6 1575 aa2.53□□□□□ -2
TRAV28-201ENST00000557548 NCAPD3P42695 1498 aa2.53□□□□□ -2
TRAV28-201ENST00000557548 USP6P35125 1406 aa2.53□□□□□ -2
TRAV28-201ENST00000557548 NINLQ9Y2I6 1382 aa2.53□□□□□ -2
TRAV28-201ENST00000557548 IGHV3-16A0A0C4DH30 117 aa2.53□□□□□ -2
TRAV28-201ENST00000557548 A0A1B0GTQ1 180 aa2.53□□□□□ -2
TRAV28-201ENST00000557548 A0A1W2PPE3 182 aa2.53□□□□□ -2
TRAV28-201ENST00000557548 PP2D1A8MPX8 630 aa2.53□□□□□ -2
TRAV28-201ENST00000557548 A8MXK9 166 aa2.53□□□□□ -2
TRAV28-201ENST00000557548 LSM1O15116 133 aaKnown RBP2.53□□□□□ -2
TRAV28-201ENST00000557548 ARHGEF9O43307 516 aa2.53□□□□□ -2
TRAV28-201ENST00000557548 KCNAB3O43448 404 aa2.53□□□□□ -2
TRAV28-201ENST00000557548 AP2A1O95782 977 aa2.53□□□□□ -2
TRAV28-201ENST00000557548 IGHG4P01861 327 aa2.53□□□□□ -2
TRAV28-201ENST00000557548 CD55P08174 381 aa2.53□□□□□ -2
TRAV28-201ENST00000557548 CFC1BP0CG36 223 aa2.53□□□□□ -2
TRAV28-201ENST00000557548 CFC1P0CG37 223 aa2.53□□□□□ -2
TRAV28-201ENST00000557548 TNNI1P19237 187 aa2.53□□□□□ -2
TRAV28-201ENST00000557548 BCL3P20749 454 aa2.53□□□□□ -2
TRAV28-201ENST00000557548 SERPINA2P20848 420 aa2.53□□□□□ -2
TRAV28-201ENST00000557548 UGT1A4P22310 534 aa2.53□□□□□ -2
TRAV28-201ENST00000557548 U2AF2P26368 475 aaKnown RBP eCLIP2.53□□□□□ -2
TRAV28-201ENST00000557548 CD1BP29016 333 aa2.53□□□□□ -2
TRAV28-201ENST00000557548 CD1CP29017 333 aa2.53□□□□□ -2
TRAV28-201ENST00000557548 FGF9P31371 208 aaPredicted RBP2.53□□□□□ -2
TRAV28-201ENST00000557548 MAP3K8P41279 467 aa2.53□□□□□ -2
TRAV28-201ENST00000557548 GYG1P46976 350 aa2.53□□□□□ -2
TRAV28-201ENST00000557548 OR1D4P47884 311 aa2.53□□□□□ -2
TRAV28-201ENST00000557548 QARSP47897 775 aaKnown RBP2.53□□□□□ -2
TRAV28-201ENST00000557548 ARHGDIBP52566 201 aa2.53□□□□□ -2
TRAV28-201ENST00000557548 CDH6P55285 790 aa2.53□□□□□ -2
TRAV28-201ENST00000557548 PLP1P60201 277 aa2.53□□□□□ -2
TRAV28-201ENST00000557548 RPS15P62841 145 aaKnown RBP2.53□□□□□ -2
TRAV28-201ENST00000557548 MRPS15P82914 257 aaKnown RBP2.53□□□□□ -2
TRAV28-201ENST00000557548 VLDLRP98155 873 aa2.53□□□□□ -2
TRAV28-201ENST00000557548 CYLC2Q14093 348 aaPredicted RBP2.53□□□□□ -2
TRAV28-201ENST00000557548 CRMP1Q14194 572 aa2.53□□□□□ -2
TRAV28-201ENST00000557548 LY6DQ14210 128 aa2.53□□□□□ -2
TRAV28-201ENST00000557548 ABRAXAS2Q15018 415 aa2.53□□□□□ -2
TRAV28-201ENST00000557548 MICBQ29980 383 aa2.53□□□□□ -2
TRAV28-201ENST00000557548 VWA2Q5GFL6 755 aa2.53□□□□□ -2
TRAV28-201ENST00000557548 C1orf220Q5T0J3 134 aa2.53□□□□□ -2
TRAV28-201ENST00000557548 C9orf66Q5T8R8 295 aa2.53□□□□□ -2
TRAV28-201ENST00000557548 LIN9Q5TKA1 542 aa2.53□□□□□ -2
TRAV28-201ENST00000557548 RAET1LQ5VY80 246 aa2.53□□□□□ -2
TRAV28-201ENST00000557548 C6orf89Q6UWU4 347 aa2.53□□□□□ -2
TRAV28-201ENST00000557548 UTS2BQ765I0 119 aa2.53□□□□□ -2
TRAV28-201ENST00000557548 BZW1Q7L1Q6 419 aaKnown RBP2.53□□□□□ -2
TRAV28-201ENST00000557548 SLC47A2Q86VL8 602 aa2.53□□□□□ -2
TRAV28-201ENST00000557548 SERPINA9Q86WD7 417 aa2.53□□□□□ -2
TRAV28-201ENST00000557548 ERO1BQ86YB8 467 aa2.53□□□□□ -2
TRAV28-201ENST00000557548 HPS6Q86YV9 775 aa2.53□□□□□ -2
TRAV28-201ENST00000557548 CD302Q8IX05 232 aa2.53□□□□□ -2
TRAV28-201ENST00000557548 MCOLN2Q8IZK6 566 aa2.53□□□□□ -2
TRAV28-201ENST00000557548 SYCE1Q8N0S2 351 aa2.53□□□□□ -2
TRAV28-201ENST00000557548 MTURNQ8N3F0 131 aa2.53□□□□□ -2
TRAV28-201ENST00000557548 GPR137CQ8N3F9 429 aa2.53□□□□□ -2
TRAV28-201ENST00000557548 ZNF248Q8NDW4 579 aa2.53□□□□□ -2
TRAV28-201ENST00000557548 CATSPER1Q8NEC5 780 aa2.53□□□□□ -2
TRAV28-201ENST00000557548 TRPV1Q8NER1 839 aa2.53□□□□□ -2
TRAV28-201ENST00000557548 BPIFCQ8NFQ6 507 aa2.53□□□□□ -2
TRAV28-201ENST00000557548 FAM81AQ8TBF8 368 aa2.53□□□□□ -2
TRAV28-201ENST00000557548 MAGEE2Q8TD90 523 aaPredicted RBP2.53□□□□□ -2
TRAV28-201ENST00000557548 HCAR2Q8TDS4 363 aa2.53□□□□□ -2
TRAV28-201ENST00000557548 NPRL2Q8WTW4 380 aa2.53□□□□□ -2
TRAV28-201ENST00000557548 IL1F10Q8WWZ1 152 aa2.53□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms