RNA–Protein interactions for RNA: ENST00000557431.5

SLIRP-210, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2 BASIC

Gene SLIRP, Length 725 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-210ENST00000557431 USB1Q9BQ65 265 aaKnown RBP12.36□□□□□ -0.43
SLIRP-210ENST00000557431 DUSP26Q9BV47 211 aa12.36□□□□□ -0.43
SLIRP-210ENST00000557431 C19orf24Q9BVV8 132 aa12.36□□□□□ -0.43
SLIRP-210ENST00000557431 OR51I1Q9H343 314 aa12.36□□□□□ -0.43
SLIRP-210ENST00000557431 ACER3Q9NUN7 267 aa12.36□□□□□ -0.43
SLIRP-210ENST00000557431 CDC42EP3Q9UKI2 254 aa12.36□□□□□ -0.43
SLIRP-210ENST00000557431 IGKV3D-15A0A087WSY6 115 aa12.35□□□□□ -0.43
SLIRP-210ENST00000557431 RNF103-CHMP3A0A140T963 221 aa12.35□□□□□ -0.43
SLIRP-210ENST00000557431 ATP6V1G2-DDX39BF2Z307 99 aa12.35□□□□□ -0.43
SLIRP-210ENST00000557431 AP3D1O14617 1153 aa12.35□□□□□ -0.43
SLIRP-210ENST00000557431 LMX1BO60663 402 aa12.35□□□□□ -0.43
SLIRP-210ENST00000557431 F12P00748 615 aaPredicted RBP12.35□□□□□ -0.43
SLIRP-210ENST00000557431 KRT16P08779 473 aa12.35□□□□□ -0.43
SLIRP-210ENST00000557431 OR12D1P0DN82 309 aa12.35□□□□□ -0.43
SLIRP-210ENST00000557431 G6PDP11413 515 aa12.35□□□□□ -0.43
SLIRP-210ENST00000557431 SLC25A16P16260 332 aa12.35□□□□□ -0.43
SLIRP-210ENST00000557431 PTAFRP25105 342 aa12.35□□□□□ -0.43
SLIRP-210ENST00000557431 MAPK1P28482 360 aa12.35□□□□□ -0.43
SLIRP-210ENST00000557431 OR2B6P58173 313 aa12.35□□□□□ -0.43
SLIRP-210ENST00000557431 CSNK2A1P68400 391 aaPredicted RBP12.35□□□□□ -0.43
SLIRP-210ENST00000557431 FUT5Q11128 374 aa12.35□□□□□ -0.43
SLIRP-210ENST00000557431 ZNF141Q15928 474 aa12.35□□□□□ -0.43
SLIRP-210ENST00000557431 LSM12Q3MHD2 195 aaKnown RBP12.35□□□□□ -0.43
SLIRP-210ENST00000557431 ATP6AP1LQ52LC2 224 aa12.35□□□□□ -0.43
SLIRP-210ENST00000557431 CYB5R2Q6BCY4 276 aa12.35□□□□□ -0.43
SLIRP-210ENST00000557431 TNFAIP8L2Q6P589 184 aaPredicted RBP12.35□□□□□ -0.43
SLIRP-210ENST00000557431 CASP12Q6UXS9 341 aa12.35□□□□□ -0.43
SLIRP-210ENST00000557431 MTDHQ86UE4 582 aaKnown RBP12.35□□□□□ -0.43
SLIRP-210ENST00000557431 P2RY8Q86VZ1 359 aa12.35□□□□□ -0.43
SLIRP-210ENST00000557431 ANKRD46Q86W74 232 aa12.35□□□□□ -0.43
SLIRP-210ENST00000557431 RIMKLAQ8IXN7 391 aa12.35□□□□□ -0.43
SLIRP-210ENST00000557431 COQ8BQ96D53 544 aa12.35□□□□□ -0.43
SLIRP-210ENST00000557431 ZG16BQ96DA0 208 aa12.35□□□□□ -0.43
SLIRP-210ENST00000557431 FBXO17Q96EF6 278 aa12.35□□□□□ -0.43
SLIRP-210ENST00000557431 CCDC106Q9BWC9 280 aa12.35□□□□□ -0.43
SLIRP-210ENST00000557431 NMUR2Q9GZQ4 415 aa12.35□□□□□ -0.43
SLIRP-210ENST00000557431 ZNF350Q9GZX5 532 aa12.35□□□□□ -0.43
SLIRP-210ENST00000557431 SHARPINQ9H0F6 387 aa12.35□□□□□ -0.43
SLIRP-210ENST00000557431 ASB6Q9NWX5 421 aa12.35□□□□□ -0.43
SLIRP-210ENST00000557431 TAS2R16Q9NYV7 291 aa12.35□□□□□ -0.43
SLIRP-210ENST00000557431 ZDHHC2Q9UIJ5 367 aa12.35□□□□□ -0.43
SLIRP-210ENST00000557431 MGAT4BQ9UQ53 548 aa12.35□□□□□ -0.43
SLIRP-210ENST00000557431 TLDC2A0PJX2 215 aa12.34□□□□□ -0.43
SLIRP-210ENST00000557431 NPHS1O60500 1241 aa12.34□□□□□ -0.43
SLIRP-210ENST00000557431 DNAJA2O60884 412 aa12.34□□□□□ -0.43
SLIRP-210ENST00000557431 STX11O75558 287 aa12.34□□□□□ -0.43
SLIRP-210ENST00000557431 CPSF4O95639 269 aaKnown RBP12.34□□□□□ -0.43
SLIRP-210ENST00000557431 FGF4P08620 206 aa12.34□□□□□ -0.43
SLIRP-210ENST00000557431 CDH2P19022 906 aaPredicted RBP12.34□□□□□ -0.43
SLIRP-210ENST00000557431 PGCP20142 388 aa12.34□□□□□ -0.43
SLIRP-210ENST00000557431 PGM1P36871 562 aa12.34□□□□□ -0.43
SLIRP-210ENST00000557431 RPL3P39023 403 aaKnown RBP12.34□□□□□ -0.43
SLIRP-210ENST00000557431 CARTPTQ16568 116 aa12.34□□□□□ -0.43
SLIRP-210ENST00000557431 ARHGAP11BQ3KRB8 267 aa12.34□□□□□ -0.43
SLIRP-210ENST00000557431 TSPO2Q5TGU0 170 aa12.34□□□□□ -0.43
SLIRP-210ENST00000557431 TYW3Q6IPR3 259 aaKnown RBP12.34□□□□□ -0.43
SLIRP-210ENST00000557431 KLHL17Q6TDP4 642 aa12.34□□□□□ -0.43
SLIRP-210ENST00000557431 C16orf62Q7Z3J2 963 aa12.34□□□□□ -0.43
SLIRP-210ENST00000557431 TMEM234Q8WY98 164 aa12.34□□□□□ -0.43
SLIRP-210ENST00000557431 SORCS2Q96PQ0 1159 aa12.34□□□□□ -0.43
SLIRP-210ENST00000557431 INPP5KQ9BT40 448 aa12.34□□□□□ -0.43
SLIRP-210ENST00000557431 TRMOQ9BU70 441 aa12.34□□□□□ -0.43
SLIRP-210ENST00000557431 BHLHE41Q9C0J9 482 aaPredicted RBP12.34□□□□□ -0.43
SLIRP-210ENST00000557431 SERINC1Q9NRX5 453 aa12.34□□□□□ -0.43
SLIRP-210ENST00000557431 SLC7A10Q9NS82 523 aa12.34□□□□□ -0.43
SLIRP-210ENST00000557431 ATAD3AQ9NVI7 634 aa12.34□□□□□ -0.43
SLIRP-210ENST00000557431 EMC3Q9P0I2 261 aa12.34□□□□□ -0.43
SLIRP-210ENST00000557431 CHRNA9Q9UGM1 479 aa12.34□□□□□ -0.43
SLIRP-210ENST00000557431 MID2Q9UJV3 735 aa12.34□□□□□ -0.43
SLIRP-210ENST00000557431 ZC3H12DA2A288 527 aaKnown RBP12.33□□□□□ -0.44
SLIRP-210ENST00000557431 PRAMEF27A3QJZ7 478 aa12.33□□□□□ -0.44
SLIRP-210ENST00000557431 H7C417 338 aa12.33□□□□□ -0.44
SLIRP-210ENST00000557431 HAX1O00165 279 aa12.33□□□□□ -0.44
SLIRP-210ENST00000557431 KLF11O14901 512 aa12.33□□□□□ -0.44
SLIRP-210ENST00000557431 MRPL33O75394 65 aaKnown RBP12.33□□□□□ -0.44
SLIRP-210ENST00000557431 C8BP07358 591 aa12.33□□□□□ -0.44
SLIRP-210ENST00000557431 IMPDH2P12268 514 aa12.33□□□□□ -0.44
SLIRP-210ENST00000557431 USF1P22415 310 aaPredicted RBP12.33□□□□□ -0.44
SLIRP-210ENST00000557431 LSM11P83369 360 aaKnown RBP eCLIP12.33□□□□□ -0.44
SLIRP-210ENST00000557431 ADGRG3Q86Y34 549 aa12.33□□□□□ -0.44
SLIRP-210ENST00000557431 ANKS4BQ8N8V4 417 aa12.33□□□□□ -0.44
SLIRP-210ENST00000557431 FAM71CQ8NEG0 241 aa12.33□□□□□ -0.44
SLIRP-210ENST00000557431 OR4A15Q8NGL6 344 aa12.33□□□□□ -0.44
SLIRP-210ENST00000557431 XAGE5Q8WWM1 108 aa12.33□□□□□ -0.44
SLIRP-210ENST00000557431 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.33□□□□□ -0.44
SLIRP-210ENST00000557431 ARL8AQ96BM9 186 aa12.33□□□□□ -0.44
SLIRP-210ENST00000557431 MOAP1Q96BY2 351 aa12.33□□□□□ -0.44
SLIRP-210ENST00000557431 TUBGCP3Q96CW5 907 aa12.33□□□□□ -0.44
SLIRP-210ENST00000557431 APOPT1Q96IL0 206 aa12.33□□□□□ -0.44
SLIRP-210ENST00000557431 MUS81Q96NY9 551 aa12.33□□□□□ -0.44
SLIRP-210ENST00000557431 SOX7Q9BT81 388 aa12.33□□□□□ -0.44
SLIRP-210ENST00000557431 PRR14Q9BWN1 585 aa12.33□□□□□ -0.44
SLIRP-210ENST00000557431 SLC17A5Q9NRA2 495 aa12.33□□□□□ -0.44
SLIRP-210ENST00000557431 MALT1Q9UDY8 824 aa12.33□□□□□ -0.44
SLIRP-210ENST00000557431 MOKQ9UQ07 419 aa12.33□□□□□ -0.44
SLIRP-210ENST00000557431 TMEM72A0PK05 275 aa12.32□□□□□ -0.44
SLIRP-210ENST00000557431 PDLIM1O00151 329 aa12.32□□□□□ -0.44
SLIRP-210ENST00000557431 KIAA0513O60268 411 aa12.32□□□□□ -0.44
SLIRP-210ENST00000557431 LYPLA1O75608 230 aaPredicted RBP12.32□□□□□ -0.44
SLIRP-210ENST00000557431 PMS2P2O95744 297 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms