RNA–Protein interactions for RNA: ENST00000557331.1

RDH11-210, Transcript of retinol dehydrogenase 11, humanhuman

TSL 4

Gene RDH11, Length 553 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH11-210ENST00000557331 SLC35A3Q9Y2D2 325 aa8.95□□□□□ -0.98
RDH11-210ENST00000557331 SLC35F4A4IF30 521 aa8.94□□□□□ -0.98
RDH11-210ENST00000557331 ZNF716A6NP11 495 aa8.94□□□□□ -0.98
RDH11-210ENST00000557331 PDLIM1O00151 329 aa8.94□□□□□ -0.98
RDH11-210ENST00000557331 AKAP10O43572 662 aa8.94□□□□□ -0.98
RDH11-210ENST00000557331 GLRA3O75311 464 aa8.94□□□□□ -0.98
RDH11-210ENST00000557331 STX11O75558 287 aa8.94□□□□□ -0.98
RDH11-210ENST00000557331 CRYAAP02489 173 aa8.94□□□□□ -0.98
RDH11-210ENST00000557331 TFPIP10646 304 aa8.94□□□□□ -0.98
RDH11-210ENST00000557331 HOXB1P14653 301 aaPredicted RBP8.94□□□□□ -0.98
RDH11-210ENST00000557331 SDC1P18827 310 aa8.94□□□□□ -0.98
RDH11-210ENST00000557331 CFPP27918 469 aa8.94□□□□□ -0.98
RDH11-210ENST00000557331 KHKP50053 298 aa8.94□□□□□ -0.98
RDH11-210ENST00000557331 PPOXP50336 477 aa8.94□□□□□ -0.98
RDH11-210ENST00000557331 IDH3GP51553 393 aaPredicted RBP8.94□□□□□ -0.98
RDH11-210ENST00000557331 ETF1P62495 437 aaKnown RBP8.94□□□□□ -0.98
RDH11-210ENST00000557331 SLC35A1P78382 337 aa8.94□□□□□ -0.98
RDH11-210ENST00000557331 EFNB3Q15768 340 aa8.94□□□□□ -0.98
RDH11-210ENST00000557331 ZNF141Q15928 474 aa8.94□□□□□ -0.98
RDH11-210ENST00000557331 SPDYE7PQ495Y7 208 aa8.94□□□□□ -0.98
RDH11-210ENST00000557331 AP1ARQ63HQ0 302 aa8.94□□□□□ -0.98
RDH11-210ENST00000557331 B3GLCTQ6Y288 498 aa8.94□□□□□ -0.98
RDH11-210ENST00000557331 DEF8Q6ZN54 512 aa8.94□□□□□ -0.98
RDH11-210ENST00000557331 TRMT10CQ7L0Y3 403 aaKnown RBP8.94□□□□□ -0.98
RDH11-210ENST00000557331 GRINAQ7Z429 371 aa8.94□□□□□ -0.98
RDH11-210ENST00000557331 FAM169BQ8N8A8 192 aa8.94□□□□□ -0.98
RDH11-210ENST00000557331 OR4F15Q8NGB8 312 aa8.94□□□□□ -0.98
RDH11-210ENST00000557331 RFWD2Q8NHY2 731 aa8.94□□□□□ -0.98
RDH11-210ENST00000557331 ARL5BQ96KC2 179 aa8.94□□□□□ -0.98
RDH11-210ENST00000557331 TSSK3Q96PN8 268 aa8.94□□□□□ -0.98
RDH11-210ENST00000557331 SDF2Q99470 211 aa8.94□□□□□ -0.98
RDH11-210ENST00000557331 THUMPD3Q9BV44 507 aaKnown RBP8.94□□□□□ -0.98
RDH11-210ENST00000557331 KATNB1Q9BVA0 655 aa8.94□□□□□ -0.98
RDH11-210ENST00000557331 PLA2G12AQ9BZM1 189 aa8.94□□□□□ -0.98
RDH11-210ENST00000557331 SAP130Q9H0E3 1048 aa8.94□□□□□ -0.98
RDH11-210ENST00000557331 POLE3Q9NRF9 147 aa8.94□□□□□ -0.98
RDH11-210ENST00000557331 EXD2Q9NVH0 621 aa8.94□□□□□ -0.98
RDH11-210ENST00000557331 TMEM181Q9P2C4 612 aa8.94□□□□□ -0.98
RDH11-210ENST00000557331 MID2Q9UJV3 735 aa8.94□□□□□ -0.98
RDH11-210ENST00000557331 PCDHGB4Q9UN71 923 aa8.94□□□□□ -0.98
RDH11-210ENST00000557331 IGHV4-61A0A0C4DH41 118 aa8.93□□□□□ -0.98
RDH11-210ENST00000557331 ESPNB1AK53 854 aa8.93□□□□□ -0.98
RDH11-210ENST00000557331 AZIN1O14977 448 aa8.93□□□□□ -0.98
RDH11-210ENST00000557331 ZNF208O43345 1280 aa8.93□□□□□ -0.98
RDH11-210ENST00000557331 H6PDO95479 791 aa8.93□□□□□ -0.98
RDH11-210ENST00000557331 CSTAP01040 98 aa8.93□□□□□ -0.98
RDH11-210ENST00000557331 IGHV3-9P01782 118 aa8.93□□□□□ -0.98
RDH11-210ENST00000557331 ITGA5P08648 1049 aa8.93□□□□□ -0.98
RDH11-210ENST00000557331 TACSTD2P09758 323 aa8.93□□□□□ -0.98
RDH11-210ENST00000557331 SLC1A3P43003 542 aa8.93□□□□□ -0.98
RDH11-210ENST00000557331 COMPP49747 757 aaPredicted RBP8.93□□□□□ -0.98
RDH11-210ENST00000557331 H3F3AP84243 136 aa8.93□□□□□ -0.98
RDH11-210ENST00000557331 SKP2Q13309 424 aa8.93□□□□□ -0.98
RDH11-210ENST00000557331 CARTPTQ16568 116 aa8.93□□□□□ -0.98
RDH11-210ENST00000557331 MST1LQ2TV78 715 aa8.93□□□□□ -0.98
RDH11-210ENST00000557331 ZNF385BQ569K4 471 aa8.93□□□□□ -0.98
RDH11-210ENST00000557331 DDX59Q5T1V6 619 aaKnown RBP eCLIP8.93□□□□□ -0.98
RDH11-210ENST00000557331 ANKRD26P1Q6NSI1 321 aa8.93□□□□□ -0.98
RDH11-210ENST00000557331 WDR31Q8NA23 367 aa8.93□□□□□ -0.98
RDH11-210ENST00000557331 IL17RDQ8NFM7 739 aa8.93□□□□□ -0.98
RDH11-210ENST00000557331 ZNF563Q8TA94 476 aa8.93□□□□□ -0.98
RDH11-210ENST00000557331 HTRA1Q92743 480 aa8.93□□□□□ -0.98
RDH11-210ENST00000557331 C3orf49Q96BT1 292 aa8.93□□□□□ -0.98
RDH11-210ENST00000557331 DDIT4LQ96D03 193 aa8.93□□□□□ -0.98
RDH11-210ENST00000557331 PPP3R2Q96LZ3 170 aa8.93□□□□□ -0.98
RDH11-210ENST00000557331 JMJD8Q96S16 334 aa8.93□□□□□ -0.98
RDH11-210ENST00000557331 VRK1Q99986 396 aaPredicted RBP8.93□□□□□ -0.98
RDH11-210ENST00000557331 SF3B5Q9BWJ5 86 aaKnown RBP8.93□□□□□ -0.98
RDH11-210ENST00000557331 PLK3Q9H4B4 646 aa8.93□□□□□ -0.98
RDH11-210ENST00000557331 CA10Q9NS85 328 aa8.93□□□□□ -0.98
RDH11-210ENST00000557331 SIRT3Q9NTG7 399 aaPredicted RBP8.93□□□□□ -0.98
RDH11-210ENST00000557331 GPATCH2Q9NW75 528 aa8.93□□□□□ -0.98
RDH11-210ENST00000557331 TMEM45AQ9NWC5 275 aa8.93□□□□□ -0.98
RDH11-210ENST00000557331 OXSMQ9NWU1 459 aa8.93□□□□□ -0.98
RDH11-210ENST00000557331 PSMC3IPQ9P2W1 217 aaPredicted RBP8.93□□□□□ -0.98
RDH11-210ENST00000557331 DYSFO75923 2080 aa8.93□□□□□ -0.98
RDH11-210ENST00000557331 B4DSR2 109 aa8.92□□□□□ -0.98
RDH11-210ENST00000557331 G3V2L1 256 aa8.92□□□□□ -0.98
RDH11-210ENST00000557331 SCAMP2O15127 329 aaKnown RBP8.92□□□□□ -0.98
RDH11-210ENST00000557331 OIP5O43482 229 aa8.92□□□□□ -0.98
RDH11-210ENST00000557331 CYP7B1O75881 506 aa8.92□□□□□ -0.98
RDH11-210ENST00000557331 VAMP5O95183 116 aa8.92□□□□□ -0.98
RDH11-210ENST00000557331 FGF4P08620 206 aa8.92□□□□□ -0.98
RDH11-210ENST00000557331 BCKDHAP12694 445 aa8.92□□□□□ -0.98
RDH11-210ENST00000557331 UQCRBP14927 111 aa8.92□□□□□ -0.98
RDH11-210ENST00000557331 PRPS1L1P21108 318 aa8.92□□□□□ -0.98
RDH11-210ENST00000557331 EDNRAP25101 427 aa8.92□□□□□ -0.98
RDH11-210ENST00000557331 DVL1P1P54792 670 aaPredicted RBP8.92□□□□□ -0.98
RDH11-210ENST00000557331 RPL38P63173 70 aaKnown RBP8.92□□□□□ -0.98
RDH11-210ENST00000557331 POU3F1Q03052 451 aaPredicted RBP8.92□□□□□ -0.98
RDH11-210ENST00000557331 SPOCK1Q08629 439 aa8.92□□□□□ -0.98
RDH11-210ENST00000557331 ZSWIM7Q19AV6 140 aa8.92□□□□□ -0.98
RDH11-210ENST00000557331 ARHGAP11BQ3KRB8 267 aa8.92□□□□□ -0.98
RDH11-210ENST00000557331 RFTN2Q52LD8 501 aaPredicted RBP8.92□□□□□ -0.98
RDH11-210ENST00000557331 PDZK1Q5T2W1 519 aa8.92□□□□□ -0.98
RDH11-210ENST00000557331 ATAD3BQ5T9A4 648 aa8.92□□□□□ -0.98
RDH11-210ENST00000557331 LIPMQ5VYY2 423 aa8.92□□□□□ -0.98
RDH11-210ENST00000557331 PAQR6Q6TCH4 344 aa8.92□□□□□ -0.98
RDH11-210ENST00000557331 CASP12Q6UXS9 341 aa8.92□□□□□ -0.98
RDH11-210ENST00000557331 USP43Q70EL4 1123 aa8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms