RNA–Protein interactions for RNA: ENST00000557269.5

SHMT2-227, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 576 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-227ENST00000557269 ZNF300Q96RE9 604 aaPredicted RBP11.54□□□□□ -0.56
SHMT2-227ENST00000557269 PRSS27Q9BQR3 290 aa11.54□□□□□ -0.56
SHMT2-227ENST00000557269 TRIM15Q9C019 465 aa11.54□□□□□ -0.56
SHMT2-227ENST00000557269 IL1RAPQ9NPH3 570 aa11.54□□□□□ -0.56
SHMT2-227ENST00000557269 MAN2C1Q9NTJ4 1040 aa11.54□□□□□ -0.56
SHMT2-227ENST00000557269 RPS6KB2Q9UBS0 482 aa11.54□□□□□ -0.56
SHMT2-227ENST00000557269 CHRNA9Q9UGM1 479 aa11.54□□□□□ -0.56
SHMT2-227ENST00000557269 RIMS3Q9UJD0 308 aa11.54□□□□□ -0.56
SHMT2-227ENST00000557269 ACAD8Q9UKU7 415 aa11.54□□□□□ -0.56
SHMT2-227ENST00000557269 SLC7A7Q9UM01 511 aa11.54□□□□□ -0.56
SHMT2-227ENST00000557269 AP4B1Q9Y6B7 739 aa11.54□□□□□ -0.56
SHMT2-227ENST00000557269 PRRC2CQ9Y520 2896 aaKnown RBP11.53□□□□□ -0.56
SHMT2-227ENST00000557269 A0A1W2PNR3 127 aa11.53□□□□□ -0.56
SHMT2-227ENST00000557269 DHRS12A0PJE2 317 aa11.53□□□□□ -0.56
SHMT2-227ENST00000557269 LINC01387J3KSC0 135 aa11.53□□□□□ -0.56
SHMT2-227ENST00000557269 TNFSF11O14788 317 aa11.53□□□□□ -0.56
SHMT2-227ENST00000557269 SEC14L5O43304 696 aa11.53□□□□□ -0.56
SHMT2-227ENST00000557269 SLC19A2O60779 497 aa11.53□□□□□ -0.56
SHMT2-227ENST00000557269 CIB2O75838 187 aa11.53□□□□□ -0.56
SHMT2-227ENST00000557269 OR5F1O95221 314 aa11.53□□□□□ -0.56
SHMT2-227ENST00000557269 ABOP16442 354 aa11.53□□□□□ -0.56
SHMT2-227ENST00000557269 GNLYP22749 145 aa11.53□□□□□ -0.56
SHMT2-227ENST00000557269 CXCR1P25024 350 aa11.53□□□□□ -0.56
SHMT2-227ENST00000557269 GCKP35557 465 aa11.53□□□□□ -0.56
SHMT2-227ENST00000557269 TAS2R41P59536 307 aa11.53□□□□□ -0.56
SHMT2-227ENST00000557269 LSM11P83369 360 aaKnown RBP eCLIP11.53□□□□□ -0.56
SHMT2-227ENST00000557269 EGR4Q05215 589 aa11.53□□□□□ -0.56
SHMT2-227ENST00000557269 SELENBP1Q13228 472 aa11.53□□□□□ -0.56
SHMT2-227ENST00000557269 KPNB1Q14974 876 aaKnown RBP11.53□□□□□ -0.56
SHMT2-227ENST00000557269 BCL2A1Q16548 175 aa11.53□□□□□ -0.56
SHMT2-227ENST00000557269 LINC00114Q6XXX2 140 aa11.53□□□□□ -0.56
SHMT2-227ENST00000557269 C3P1Q6ZMU1 363 aa11.53□□□□□ -0.56
SHMT2-227ENST00000557269 DOLPP1Q86YN1 238 aa11.53□□□□□ -0.56
SHMT2-227ENST00000557269 ZDHHC21Q8IVQ6 265 aa11.53□□□□□ -0.56
SHMT2-227ENST00000557269 NKAIN4Q8IVV8 208 aa11.53□□□□□ -0.56
SHMT2-227ENST00000557269 RNF217Q8TC41 542 aa11.53□□□□□ -0.56
SHMT2-227ENST00000557269 DNAJA4Q8WW22 397 aaPredicted RBP11.53□□□□□ -0.56
SHMT2-227ENST00000557269 SLC38A4Q969I6 547 aa11.53□□□□□ -0.56
SHMT2-227ENST00000557269 ZNF845Q96IR2 970 aaPredicted RBP11.53□□□□□ -0.56
SHMT2-227ENST00000557269 PRRC1Q96M27 445 aa11.53□□□□□ -0.56
SHMT2-227ENST00000557269 PRDM14Q9GZV8 571 aa11.53□□□□□ -0.56
SHMT2-227ENST00000557269 MAGIXQ9H6Y5 334 aa11.53□□□□□ -0.56
SHMT2-227ENST00000557269 COQ10BQ9H8M1 238 aa11.53□□□□□ -0.56
SHMT2-227ENST00000557269 SERINC1Q9NRX5 453 aa11.53□□□□□ -0.56
SHMT2-227ENST00000557269 PRDM4Q9UKN5 801 aa11.53□□□□□ -0.56
SHMT2-227ENST00000557269 AURKCQ9UQB9 309 aa11.53□□□□□ -0.56
SHMT2-227ENST00000557269 CAMK2AQ9UQM7 478 aa11.53□□□□□ -0.56
SHMT2-227ENST00000557269 FAM208BQ5VWN6 2430 aa11.52□□□□□ -0.56
SHMT2-227ENST00000557269 DNAJC13O75165 2243 aa11.52□□□□□ -0.56
SHMT2-227ENST00000557269 A0A087WUJ7 227 aa11.52□□□□□ -0.57
SHMT2-227ENST00000557269 ELOA3DA6NLF2 546 aaPredicted RBP11.52□□□□□ -0.57
SHMT2-227ENST00000557269 EIF1AYO14602 144 aaKnown RBP11.52□□□□□ -0.57
SHMT2-227ENST00000557269 BCKDKO14874 412 aa11.52□□□□□ -0.57
SHMT2-227ENST00000557269 ADAMDEC1O15204 470 aa11.52□□□□□ -0.57
SHMT2-227ENST00000557269 CHP2O43745 196 aa11.52□□□□□ -0.57
SHMT2-227ENST00000557269 FABP3P05413 133 aa11.52□□□□□ -0.57
SHMT2-227ENST00000557269 TPOP07202 933 aa11.52□□□□□ -0.57
SHMT2-227ENST00000557269 TFPIP10646 304 aa11.52□□□□□ -0.57
SHMT2-227ENST00000557269 KLK2P20151 261 aa11.52□□□□□ -0.57
SHMT2-227ENST00000557269 MAGEA2P43356 314 aa11.52□□□□□ -0.57
SHMT2-227ENST00000557269 CHRNB3Q05901 458 aa11.52□□□□□ -0.57
SHMT2-227ENST00000557269 ELOA3BQ3SY89 546 aa11.52□□□□□ -0.57
SHMT2-227ENST00000557269 FAM98BQ52LJ0 330 aaKnown RBP11.52□□□□□ -0.57
SHMT2-227ENST00000557269 SYT14P1Q58G82 188 aa11.52□□□□□ -0.57
SHMT2-227ENST00000557269 WLSQ5T9L3 541 aa11.52□□□□□ -0.57
SHMT2-227ENST00000557269 RTL6Q6ICC9 239 aa11.52□□□□□ -0.57
SHMT2-227ENST00000557269 C3orf33Q6P1S2 294 aa11.52□□□□□ -0.57
SHMT2-227ENST00000557269 ZNF585AQ6P3V2 769 aa11.52□□□□□ -0.57
SHMT2-227ENST00000557269 Q6ZPB1 254 aaPredicted RBP11.52□□□□□ -0.57
SHMT2-227ENST00000557269 PIWIL3Q7Z3Z3 882 aaKnown RBP11.52□□□□□ -0.57
SHMT2-227ENST00000557269 ZNF605Q86T29 641 aa11.52□□□□□ -0.57
SHMT2-227ENST00000557269 CD163Q86VB7 1156 aa11.52□□□□□ -0.57
SHMT2-227ENST00000557269 RPRMLQ8N4K4 120 aa11.52□□□□□ -0.57
SHMT2-227ENST00000557269 GALNT11Q8NCW6 608 aa11.52□□□□□ -0.57
SHMT2-227ENST00000557269 PIK3C3Q8NEB9 887 aa11.52□□□□□ -0.57
SHMT2-227ENST00000557269 ELOA3Q8NG57 546 aa11.52□□□□□ -0.57
SHMT2-227ENST00000557269 TMEM255BQ8WV15 326 aa11.52□□□□□ -0.57
SHMT2-227ENST00000557269 KTI12Q96EK9 354 aaPredicted RBP11.52□□□□□ -0.57
SHMT2-227ENST00000557269 KLHL15Q96M94 604 aa11.52□□□□□ -0.57
SHMT2-227ENST00000557269 OR5B2Q96R09 309 aa11.52□□□□□ -0.57
SHMT2-227ENST00000557269 PIP5K1AQ99755 562 aa11.52□□□□□ -0.57
SHMT2-227ENST00000557269 TUBA1CQ9BQE3 449 aa11.52□□□□□ -0.57
SHMT2-227ENST00000557269 CHID1Q9BWS9 393 aa11.52□□□□□ -0.57
SHMT2-227ENST00000557269 DENND2DQ9H6A0 471 aaPredicted RBP11.52□□□□□ -0.57
SHMT2-227ENST00000557269 NMNAT1Q9HAN9 279 aaPredicted RBP11.52□□□□□ -0.57
SHMT2-227ENST00000557269 C12orf10Q9HB07 376 aa11.52□□□□□ -0.57
SHMT2-227ENST00000557269 ALKBH4Q9NXW9 302 aa11.52□□□□□ -0.57
SHMT2-227ENST00000557269 TINAGQ9UJW2 476 aa11.52□□□□□ -0.57
SHMT2-227ENST00000557269 OSGIN2Q9Y236 505 aa11.52□□□□□ -0.57
SHMT2-227ENST00000557269 SVILO95425 2214 aa11.51□□□□□ -0.57
SHMT2-227ENST00000557269 H0Y3Z8 333 aa11.51□□□□□ -0.57
SHMT2-227ENST00000557269 ZNF208O43345 1280 aa11.51□□□□□ -0.57
SHMT2-227ENST00000557269 NPIPB7O75200 414 aa11.51□□□□□ -0.57
SHMT2-227ENST00000557269 GPIP06744 558 aa11.51□□□□□ -0.57
SHMT2-227ENST00000557269 RAP2AP10114 183 aa11.51□□□□□ -0.57
SHMT2-227ENST00000557269 PNMTP11086 282 aa11.51□□□□□ -0.57
SHMT2-227ENST00000557269 UMPSP11172 480 aa11.51□□□□□ -0.57
SHMT2-227ENST00000557269 IMPDH2P12268 514 aa11.51□□□□□ -0.57
SHMT2-227ENST00000557269 RHCEP18577 417 aa11.51□□□□□ -0.57
SHMT2-227ENST00000557269 ACTR3P61158 418 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms