RNA–Protein interactions for RNA: ENST00000556827.1

HIF1A-209, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 2

Gene HIF1A, Length 752 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-209ENST00000556827 LRRC40Q9H9A6 602 aa4.39□□□□□ -1.71
HIF1A-209ENST00000556827 NHEJ1Q9H9Q4 299 aaPredicted RBP4.39□□□□□ -1.71
HIF1A-209ENST00000556827 FAM60AQ9NP50 221 aa4.39□□□□□ -1.71
HIF1A-209ENST00000556827 NLE1Q9NVX2 485 aaPredicted RBP4.39□□□□□ -1.71
HIF1A-209ENST00000556827 SPHK1Q9NYA1 384 aa4.39□□□□□ -1.71
HIF1A-209ENST00000556827 STMN3Q9NZ72 180 aa4.39□□□□□ -1.71
HIF1A-209ENST00000556827 FLRT3Q9NZU0 649 aa4.39□□□□□ -1.71
HIF1A-209ENST00000556827 SEC14L3Q9UDX4 400 aa4.39□□□□□ -1.71
HIF1A-209ENST00000556827 ANAPC5Q9UJX4 755 aa4.39□□□□□ -1.71
HIF1A-209ENST00000556827 C3orf18Q9UK00 162 aa4.39□□□□□ -1.71
HIF1A-209ENST00000556827 NTNG1Q9Y2I2 539 aa4.39□□□□□ -1.71
HIF1A-209ENST00000556827 HYOU1Q9Y4L1 999 aa4.39□□□□□ -1.71
HIF1A-209ENST00000556827 ALG6Q9Y672 507 aa4.39□□□□□ -1.71
HIF1A-209ENST00000556827 TLN1Q9Y490 2541 aaKnown RBP4.39□□□□□ -1.71
HIF1A-209ENST00000556827 IGLV3-16A0A075B6K0 115 aa4.38□□□□□ -1.71
HIF1A-209ENST00000556827 hCG_1818297A0A087WSY0 165 aa4.38□□□□□ -1.71
HIF1A-209ENST00000556827 IGKV3D-15A0A087WSY6 115 aa4.38□□□□□ -1.71
HIF1A-209ENST00000556827 NR5A2O00482 541 aa4.38□□□□□ -1.71
HIF1A-209ENST00000556827 TXNDC9O14530 226 aa4.38□□□□□ -1.71
HIF1A-209ENST00000556827 PFDN6O15212 129 aa4.38□□□□□ -1.71
HIF1A-209ENST00000556827 TTI1O43156 1089 aa4.38□□□□□ -1.71
HIF1A-209ENST00000556827 ALOX12BO75342 701 aa4.38□□□□□ -1.71
HIF1A-209ENST00000556827 VPS26AO75436 327 aa4.38□□□□□ -1.71
HIF1A-209ENST00000556827 SERPINA7P05543 415 aa4.38□□□□□ -1.71
HIF1A-209ENST00000556827 HEXBP07686 556 aa4.38□□□□□ -1.71
HIF1A-209ENST00000556827 ZNF26P17031 533 aaPredicted RBP4.38□□□□□ -1.71
HIF1A-209ENST00000556827 CD9P21926 228 aa4.38□□□□□ -1.71
HIF1A-209ENST00000556827 ACHEP22303 614 aa4.38□□□□□ -1.71
HIF1A-209ENST00000556827 CA6P23280 308 aa4.38□□□□□ -1.71
HIF1A-209ENST00000556827 MSNP26038 577 aaKnown RBP4.38□□□□□ -1.71
HIF1A-209ENST00000556827 PSMB4P28070 264 aa4.38□□□□□ -1.71
HIF1A-209ENST00000556827 ADRA1AP35348 466 aa4.38□□□□□ -1.71
HIF1A-209ENST00000556827 MAGEA1P43355 309 aa4.38□□□□□ -1.71
HIF1A-209ENST00000556827 RPL21P46778 160 aaKnown RBP4.38□□□□□ -1.71
HIF1A-209ENST00000556827 OR1D4P47884 311 aa4.38□□□□□ -1.71
HIF1A-209ENST00000556827 ZNF140P52738 457 aaPredicted RBP4.38□□□□□ -1.71
HIF1A-209ENST00000556827 EMP2P54851 167 aa4.38□□□□□ -1.71
HIF1A-209ENST00000556827 VSX2P58304 361 aaPredicted RBP4.38□□□□□ -1.71
HIF1A-209ENST00000556827 KLC1Q07866 573 aa4.38□□□□□ -1.71
HIF1A-209ENST00000556827 HSPA14Q0VDF9 509 aa4.38□□□□□ -1.71
HIF1A-209ENST00000556827 CAMK2DQ13557 499 aa4.38□□□□□ -1.71
HIF1A-209ENST00000556827 POU6F1Q14863 301 aa4.38□□□□□ -1.71
HIF1A-209ENST00000556827 ZIC1Q15915 447 aa4.38□□□□□ -1.71
HIF1A-209ENST00000556827 ZNF630Q2M218 657 aaPredicted RBP4.38□□□□□ -1.71
HIF1A-209ENST00000556827 PARP6Q2NL67 630 aa4.38□□□□□ -1.71
HIF1A-209ENST00000556827 FASTKD1Q53R41 847 aaKnown RBP4.38□□□□□ -1.71
HIF1A-209ENST00000556827 FAM182AQ5T1J6 154 aa4.38□□□□□ -1.71
HIF1A-209ENST00000556827 ARMC4Q5T2S8 1044 aa4.38□□□□□ -1.71
HIF1A-209ENST00000556827 PTRHD1Q6GMV3 140 aaKnown RBP4.38□□□□□ -1.71
HIF1A-209ENST00000556827 UNC5DQ6UXZ4 953 aa4.38□□□□□ -1.71
HIF1A-209ENST00000556827 KRT74Q7RTS7 529 aa4.38□□□□□ -1.71
HIF1A-209ENST00000556827 PRSS58Q8IYP2 241 aa4.38□□□□□ -1.71
HIF1A-209ENST00000556827 CATSPER1Q8NEC5 780 aa4.38□□□□□ -1.71
HIF1A-209ENST00000556827 OR11G2Q8NGC1 345 aa4.38□□□□□ -1.71
HIF1A-209ENST00000556827 MCOLN3Q8TDD5 553 aa4.38□□□□□ -1.71
HIF1A-209ENST00000556827 ATL1Q8WXF7 558 aa4.38□□□□□ -1.71
HIF1A-209ENST00000556827 HAS2Q92819 552 aa4.38□□□□□ -1.71
HIF1A-209ENST00000556827 RERGQ96A58 199 aaPredicted RBP4.38□□□□□ -1.71
HIF1A-209ENST00000556827 VPS33AQ96AX1 596 aa4.38□□□□□ -1.71
HIF1A-209ENST00000556827 RAD51AP1Q96B01 352 aa4.38□□□□□ -1.71
HIF1A-209ENST00000556827 CDKN2AIPNLQ96HQ2 116 aa4.38□□□□□ -1.71
HIF1A-209ENST00000556827 DNAJC1Q96KC8 554 aaKnown RBP4.38□□□□□ -1.71
HIF1A-209ENST00000556827 CABS1Q96KC9 395 aa4.38□□□□□ -1.71
HIF1A-209ENST00000556827 LURAP1Q96LR2 239 aa4.38□□□□□ -1.71
HIF1A-209ENST00000556827 SPATA13Q96N96 652 aa4.38□□□□□ -1.71
HIF1A-209ENST00000556827 FEVQ99581 238 aa4.38□□□□□ -1.71
HIF1A-209ENST00000556827 OR2B2Q9GZK3 357 aa4.38□□□□□ -1.71
HIF1A-209ENST00000556827 ZNF160Q9HCG1 818 aa4.38□□□□□ -1.71
HIF1A-209ENST00000556827 CCDC177Q9NQR7 707 aaPredicted RBP4.38□□□□□ -1.71
HIF1A-209ENST00000556827 C14orf105Q9NVL8 296 aa4.38□□□□□ -1.71
HIF1A-209ENST00000556827 TRPC4Q9UBN4 977 aa4.38□□□□□ -1.71
HIF1A-209ENST00000556827 CACNG5Q9UF02 275 aa4.38□□□□□ -1.71
HIF1A-209ENST00000556827 SH3BGRL2Q9UJC5 107 aa4.38□□□□□ -1.71
HIF1A-209ENST00000556827 STUB1Q9UNE7 303 aa4.38□□□□□ -1.71
HIF1A-209ENST00000556827 WDR83OSQ9Y284 106 aa4.38□□□□□ -1.71
HIF1A-209ENST00000556827 TEX15Q9BXT5 2789 aa4.37□□□□□ -1.71
HIF1A-209ENST00000556827 PTPN13Q12923 2485 aa4.37□□□□□ -1.71
HIF1A-209ENST00000556827 COL12A1Q99715 3063 aa4.37□□□□□ -1.71
HIF1A-209ENST00000556827 FLNCQ14315 2725 aa4.37□□□□□ -1.71
HIF1A-209ENST00000556827 IGHV4-4A0A075B6R2 117 aa4.37□□□□□ -1.71
HIF1A-209ENST00000556827 TRBV5-4A0A0C4DH59 114 aa4.37□□□□□ -1.71
HIF1A-209ENST00000556827 A0A1B0GU03 582 aa4.37□□□□□ -1.71
HIF1A-209ENST00000556827 SLC5A10A0PJK1 596 aa4.37□□□□□ -1.71
HIF1A-209ENST00000556827 SYCE3A1L190 88 aa4.37□□□□□ -1.71
HIF1A-209ENST00000556827 VSTM2BA6NLU5 285 aa4.37□□□□□ -1.71
HIF1A-209ENST00000556827 A8MUI8 341 aa4.37□□□□□ -1.71
HIF1A-209ENST00000556827 IDSB3KWA1 339 aa4.37□□□□□ -1.71
HIF1A-209ENST00000556827 H3BMH7 237 aa4.37□□□□□ -1.71
HIF1A-209ENST00000556827 H7C0S8 307 aa4.37□□□□□ -1.71
HIF1A-209ENST00000556827 CCL22O00626 93 aa4.37□□□□□ -1.71
HIF1A-209ENST00000556827 E2F3O00716 465 aa4.37□□□□□ -1.71
HIF1A-209ENST00000556827 SLC19A2O60779 497 aa4.37□□□□□ -1.71
HIF1A-209ENST00000556827 RAF1P04049 648 aa4.37□□□□□ -1.71
HIF1A-209ENST00000556827 CMPK1P30085 196 aa4.37□□□□□ -1.71
HIF1A-209ENST00000556827 PKLRP30613 574 aa4.37□□□□□ -1.71
HIF1A-209ENST00000556827 GABRA4P48169 554 aa4.37□□□□□ -1.71
HIF1A-209ENST00000556827 TNFSF10P50591 281 aa4.37□□□□□ -1.71
HIF1A-209ENST00000556827 HADHBP55084 474 aaKnown RBP4.37□□□□□ -1.71
HIF1A-209ENST00000556827 RWDD2BP57060 319 aa4.37□□□□□ -1.71
HIF1A-209ENST00000556827 ZNF33BQ06732 778 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms