RNA–Protein interactions for RNA: ENST00000556433.5

ACTN1-220, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 1,259 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-220ENST00000556433 ADGRG3Q86Y34 549 aa19.98■□□□□ 0.79
ACTN1-220ENST00000556433 ANKFN1Q8N957 763 aa19.98■□□□□ 0.79
ACTN1-220ENST00000556433 TRMT61AQ96FX7 289 aaKnown RBP19.98■□□□□ 0.79
ACTN1-220ENST00000556433 ARL5BQ96KC2 179 aa19.98■□□□□ 0.79
ACTN1-220ENST00000556433 PANX1Q96RD7 426 aa19.98■□□□□ 0.79
ACTN1-220ENST00000556433 EXOSC3Q9NQT5 275 aaKnown RBP19.98■□□□□ 0.79
ACTN1-220ENST00000556433 HDGFL3Q9Y3E1 203 aa19.98■□□□□ 0.79
ACTN1-220ENST00000556433 TLN2Q9Y4G6 2542 aa19.98■□□□□ 0.79
ACTN1-220ENST00000556433 IGKV3D-15A0A087WSY6 115 aa19.97■□□□□ 0.79
ACTN1-220ENST00000556433 OVOL3O00110 214 aa19.97■□□□□ 0.79
ACTN1-220ENST00000556433 ALDOCP09972 364 aaKnown RBP19.97■□□□□ 0.79
ACTN1-220ENST00000556433 GGT1P19440 569 aa19.97■□□□□ 0.79
ACTN1-220ENST00000556433 FKBP2P26885 142 aaKnown RBP19.97■□□□□ 0.79
ACTN1-220ENST00000556433 TNK1Q13470 666 aa19.97■□□□□ 0.79
ACTN1-220ENST00000556433 SYPL1Q16563 259 aa19.97■□□□□ 0.79
ACTN1-220ENST00000556433 TIMM23BQ5SRD1 257 aa19.97■□□□□ 0.79
ACTN1-220ENST00000556433 ZNF621Q6ZSS3 439 aa19.97■□□□□ 0.79
ACTN1-220ENST00000556433 SPATA19Q7Z5L4 167 aa19.97■□□□□ 0.79
ACTN1-220ENST00000556433 UBE2J2Q8N2K1 259 aa19.97■□□□□ 0.79
ACTN1-220ENST00000556433 TRIML2Q8N7C3 387 aa19.97■□□□□ 0.79
ACTN1-220ENST00000556433 ANKRD42Q8N9B4 389 aa19.97■□□□□ 0.79
ACTN1-220ENST00000556433 KBTBD8Q8NFY9 601 aa19.97■□□□□ 0.79
ACTN1-220ENST00000556433 CNOT9Q92600 299 aaKnown RBP19.97■□□□□ 0.79
ACTN1-220ENST00000556433 GTPBP3Q969Y2 492 aaKnown RBP19.97■□□□□ 0.79
ACTN1-220ENST00000556433 TRNT1Q96Q11 434 aaKnown RBP19.97■□□□□ 0.79
ACTN1-220ENST00000556433 INPP5KQ9BT40 448 aa19.97■□□□□ 0.79
ACTN1-220ENST00000556433 OR11A1Q9GZK7 315 aa19.97■□□□□ 0.79
ACTN1-220ENST00000556433 AIG1Q9NVV5 245 aa19.97■□□□□ 0.79
ACTN1-220ENST00000556433 LIPT1Q9Y234 373 aa19.97■□□□□ 0.79
ACTN1-220ENST00000556433 NOSIPQ9Y314 301 aaKnown RBP19.97■□□□□ 0.79
ACTN1-220ENST00000556433 HIVEP2P31629 2446 aa19.96■□□□□ 0.79
ACTN1-220ENST00000556433 A0A1W2PP18 115 aa19.96■□□□□ 0.79
ACTN1-220ENST00000556433 SDHDO14521 159 aa19.96■□□□□ 0.79
ACTN1-220ENST00000556433 ADAM11O75078 769 aa19.96■□□□□ 0.79
ACTN1-220ENST00000556433 PMS2P2O95744 297 aa19.96■□□□□ 0.79
ACTN1-220ENST00000556433 IGHV3-9P01782 118 aa19.96■□□□□ 0.79
ACTN1-220ENST00000556433 COX5AP20674 150 aa19.96■□□□□ 0.79
ACTN1-220ENST00000556433 IL12AP29459 219 aa19.96■□□□□ 0.79
ACTN1-220ENST00000556433 CLK1P49759 484 aaKnown RBP19.96■□□□□ 0.79
ACTN1-220ENST00000556433 OR2B6P58173 313 aa19.96■□□□□ 0.79
ACTN1-220ENST00000556433 PLAURQ03405 335 aa19.96■□□□□ 0.79
ACTN1-220ENST00000556433 CLEC12BQ2HXU8 276 aa19.96■□□□□ 0.79
ACTN1-220ENST00000556433 FBXW9Q5XUX1 488 aa19.96■□□□□ 0.79
ACTN1-220ENST00000556433 P2RY8Q86VZ1 359 aa19.96■□□□□ 0.79
ACTN1-220ENST00000556433 ZNF433Q8N7K0 673 aaPredicted RBP19.96■□□□□ 0.79
ACTN1-220ENST00000556433 APH1AQ96BI3 265 aa19.96■□□□□ 0.79
ACTN1-220ENST00000556433 OR52E6Q96RD3 313 aa19.96■□□□□ 0.79
ACTN1-220ENST00000556433 TRIM2Q9C040 744 aa19.96■□□□□ 0.79
ACTN1-220ENST00000556433 RAB21Q9UL25 225 aa19.96■□□□□ 0.79
ACTN1-220ENST00000556433 MAGED1Q9Y5V3 778 aaPredicted RBP19.96■□□□□ 0.79
ACTN1-220ENST00000556433 ZNF716A6NP11 495 aa19.95■□□□□ 0.78
ACTN1-220ENST00000556433 GPR171O14626 319 aa19.95■□□□□ 0.78
ACTN1-220ENST00000556433 RAMP1O60894 148 aa19.95■□□□□ 0.78
ACTN1-220ENST00000556433 PGM3O95394 542 aa19.95■□□□□ 0.78
ACTN1-220ENST00000556433 GSNP06396 782 aa19.95■□□□□ 0.78
ACTN1-220ENST00000556433 PGRP06401 933 aa19.95■□□□□ 0.78
ACTN1-220ENST00000556433 CHRM4P08173 479 aa19.95■□□□□ 0.78
ACTN1-220ENST00000556433 IDUAP35475 653 aa19.95■□□□□ 0.78
ACTN1-220ENST00000556433 CDKN1AP38936 164 aa19.95■□□□□ 0.78
ACTN1-220ENST00000556433 CDKN2CP42773 168 aa19.95■□□□□ 0.78
ACTN1-220ENST00000556433 HTR3AP46098 478 aa19.95■□□□□ 0.78
ACTN1-220ENST00000556433 ANXA11P50995 505 aaKnown RBP19.95■□□□□ 0.78
ACTN1-220ENST00000556433 FAPQ12884 760 aa19.95■□□□□ 0.78
ACTN1-220ENST00000556433 DNAJC14Q6Y2X3 702 aaPredicted RBP19.95■□□□□ 0.78
ACTN1-220ENST00000556433 SSX8Q7RTT4 187 aa19.95■□□□□ 0.78
ACTN1-220ENST00000556433 CROCCP2Q86T23 111 aa19.95■□□□□ 0.78
ACTN1-220ENST00000556433 CCDC103Q8IW40 242 aa19.95■□□□□ 0.78
ACTN1-220ENST00000556433 PIGXQ8TBF5 258 aa19.95■□□□□ 0.78
ACTN1-220ENST00000556433 ZBTB18Q99592 522 aa19.95■□□□□ 0.78
ACTN1-220ENST00000556433 SLC38A1Q9H2H9 487 aa19.95■□□□□ 0.78
ACTN1-220ENST00000556433 WDR55Q9H6Y2 383 aaPredicted RBP19.95■□□□□ 0.78
ACTN1-220ENST00000556433 MTHFD2LQ9H903 347 aaPredicted RBP19.95■□□□□ 0.78
ACTN1-220ENST00000556433 CISD1Q9NZ45 108 aaKnown RBP19.95■□□□□ 0.78
ACTN1-220ENST00000556433 GPR45Q9Y5Y3 372 aa19.95■□□□□ 0.78
ACTN1-220ENST00000556433 JMJD1CQ15652 2540 aa19.95■□□□□ 0.78
ACTN1-220ENST00000556433 TMED7-TICAM2A0A0A6YYA0 188 aa19.94■□□□□ 0.78
ACTN1-220ENST00000556433 GOLGA8QA0A0J9YX86 632 aa19.94■□□□□ 0.78
ACTN1-220ENST00000556433 CIB4A0PJX0 185 aa19.94■□□□□ 0.78
ACTN1-220ENST00000556433 GOLGA8OA6NCC3 632 aa19.94■□□□□ 0.78
ACTN1-220ENST00000556433 AGAP5A6NIR3 686 aa19.94■□□□□ 0.78
ACTN1-220ENST00000556433 OR5H1A6NKK0 313 aa19.94■□□□□ 0.78
ACTN1-220ENST00000556433 GOLGA8NF8WBI6 632 aa19.94■□□□□ 0.78
ACTN1-220ENST00000556433 AP3D1O14617 1153 aa19.94■□□□□ 0.78
ACTN1-220ENST00000556433 DNPH1O43598 174 aa19.94■□□□□ 0.78
ACTN1-220ENST00000556433 TXNL4AP83876 142 aaKnown RBP19.94■□□□□ 0.78
ACTN1-220ENST00000556433 PPP2R2BQ00005 443 aa19.94■□□□□ 0.78
ACTN1-220ENST00000556433 VEZF1Q14119 521 aa19.94■□□□□ 0.78
ACTN1-220ENST00000556433 PGGHGQ32M88 737 aa19.94■□□□□ 0.78
ACTN1-220ENST00000556433 LRRC74BQ6ZQY2 392 aa19.94■□□□□ 0.78
ACTN1-220ENST00000556433 CMIPQ8IY22 773 aa19.94■□□□□ 0.78
ACTN1-220ENST00000556433 TMEM181Q9P2C4 612 aa19.94■□□□□ 0.78
ACTN1-220ENST00000556433 TRAPPC4Q9Y296 219 aa19.94■□□□□ 0.78
ACTN1-220ENST00000556433 TMED7Q9Y3B3 224 aa19.94■□□□□ 0.78
ACTN1-220ENST00000556433 CCT8L1PA6NM43 557 aa19.93■□□□□ 0.78
ACTN1-220ENST00000556433 INAFM1C9JVW0 142 aa19.93■□□□□ 0.78
ACTN1-220ENST00000556433 MRPL33O75394 65 aaKnown RBP19.93■□□□□ 0.78
ACTN1-220ENST00000556433 RAD51DO75771 328 aa19.93■□□□□ 0.78
ACTN1-220ENST00000556433 NR2F1P10589 423 aa19.93■□□□□ 0.78
ACTN1-220ENST00000556433 EPHA3P29320 983 aa19.93■□□□□ 0.78
ACTN1-220ENST00000556433 NTF4P34130 210 aa19.93■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms