RNA–Protein interactions for RNA: ENST00000556170.5

NEK9-209, Transcript of NIMA related kinase 9, humanhuman

TSL 5

Gene NEK9, Length 3,975 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-209ENST00000556170 LAMP5Q9UJQ1 280 aa13.73□□□□□ -0.21
NEK9-209ENST00000556170 MKL2Q9ULH7 1088 aa13.73□□□□□ -0.21
NEK9-209ENST00000556170 ANKRD61A6NGH8 418 aa13.73□□□□□ -0.21
NEK9-209ENST00000556170 EIF1AYO14602 144 aaKnown RBP13.73□□□□□ -0.21
NEK9-209ENST00000556170 GALR3O60755 368 aaPredicted RBP13.73□□□□□ -0.21
NEK9-209ENST00000556170 SERPINA3P01011 423 aa13.73□□□□□ -0.21
NEK9-209ENST00000556170 CT62P0C5K7 136 aa13.73□□□□□ -0.21
NEK9-209ENST00000556170 MYF5P13349 255 aa13.73□□□□□ -0.21
NEK9-209ENST00000556170 RPS27P42677 84 aaKnown RBP13.73□□□□□ -0.21
NEK9-209ENST00000556170 ARHGAP11BQ3KRB8 267 aa13.73□□□□□ -0.21
NEK9-209ENST00000556170 BCL2L15Q5TBC7 163 aa13.73□□□□□ -0.21
NEK9-209ENST00000556170 RPL13AP3Q6NVV1 102 aa13.73□□□□□ -0.21
NEK9-209ENST00000556170 ZNF322Q6U7Q0 402 aaPredicted RBP13.73□□□□□ -0.21
NEK9-209ENST00000556170 DNAJC5GQ8N7S2 189 aa13.73□□□□□ -0.21
NEK9-209ENST00000556170 SPERTQ8NA61 448 aa13.73□□□□□ -0.21
NEK9-209ENST00000556170 PDCD1LG2Q9BQ51 273 aa13.73□□□□□ -0.21
NEK9-209ENST00000556170 OR2B2Q9GZK3 357 aa13.73□□□□□ -0.21
NEK9-209ENST00000556170 FOLH1BQ9HBA9 442 aa13.73□□□□□ -0.21
NEK9-209ENST00000556170 PRODH2Q9UF12 536 aa13.73□□□□□ -0.21
NEK9-209ENST00000556170 A0A1W2PQF6 199 aa13.72□□□□□ -0.21
NEK9-209ENST00000556170 ACOD1A6NK06 481 aa13.72□□□□□ -0.21
NEK9-209ENST00000556170 SURF4O15260 269 aa13.72□□□□□ -0.21
NEK9-209ENST00000556170 RNF13O43567 381 aa13.72□□□□□ -0.21
NEK9-209ENST00000556170 RENP00797 406 aa13.72□□□□□ -0.21
NEK9-209ENST00000556170 SNRPBP14678 240 aaKnown RBP13.72□□□□□ -0.21
NEK9-209ENST00000556170 GABRB1P18505 474 aa13.72□□□□□ -0.21
NEK9-209ENST00000556170 ADH7P40394 386 aa13.72□□□□□ -0.21
NEK9-209ENST00000556170 AQP2P41181 271 aa13.72□□□□□ -0.21
NEK9-209ENST00000556170 P2RY14Q15391 338 aa13.72□□□□□ -0.21
NEK9-209ENST00000556170 PRAMEF17Q5VTA0 474 aa13.72□□□□□ -0.21
NEK9-209ENST00000556170 ULK3Q6PHR2 472 aa13.72□□□□□ -0.21
NEK9-209ENST00000556170 LINC00299Q6ZSB3 139 aa13.72□□□□□ -0.21
NEK9-209ENST00000556170 SIRT6Q8N6T7 355 aa13.72□□□□□ -0.21
NEK9-209ENST00000556170 MORN4Q8NDC4 146 aa13.72□□□□□ -0.21
NEK9-209ENST00000556170 BEST4Q8NFU0 473 aa13.72□□□□□ -0.21
NEK9-209ENST00000556170 OR51Q1Q8NH59 317 aa13.72□□□□□ -0.21
NEK9-209ENST00000556170 ELF4Q99607 663 aaPredicted RBP13.72□□□□□ -0.21
NEK9-209ENST00000556170 LDHAL6BQ9BYZ2 381 aaPredicted RBP13.72□□□□□ -0.21
NEK9-209ENST00000556170 CBLCQ9ULV8 474 aa13.72□□□□□ -0.21
NEK9-209ENST00000556170 SESN1Q9Y6P5 492 aa13.72□□□□□ -0.21
NEK9-209ENST00000556170 A3GALT2U3KPV4 340 aa13.72□□□□□ -0.21
NEK9-209ENST00000556170 RTTNQ86VV8 2226 aa13.72□□□□□ -0.21
NEK9-209ENST00000556170 GVINP1Q7Z2Y8 2422 aa13.72□□□□□ -0.21
NEK9-209ENST00000556170 ARPC4-TTLL3A0A0A6YYG9 625 aa13.72□□□□□ -0.21
NEK9-209ENST00000556170 OR5K3A6NET4 321 aa13.72□□□□□ -0.21
NEK9-209ENST00000556170 TBX19O60806 448 aa13.72□□□□□ -0.21
NEK9-209ENST00000556170 OPN1LWP04000 364 aa13.72□□□□□ -0.21
NEK9-209ENST00000556170 YES1P07947 543 aa13.72□□□□□ -0.21
NEK9-209ENST00000556170 CDK5Q00535 292 aa13.72□□□□□ -0.21
NEK9-209ENST00000556170 FUT5Q11128 374 aa13.72□□□□□ -0.21
NEK9-209ENST00000556170 SELENBP1Q13228 472 aa13.72□□□□□ -0.21
NEK9-209ENST00000556170 NTRK2Q16620 822 aa13.72□□□□□ -0.21
NEK9-209ENST00000556170 TATDN3Q17R31 274 aa13.72□□□□□ -0.21
NEK9-209ENST00000556170 MEIOBQ8N635 442 aa13.72□□□□□ -0.21
NEK9-209ENST00000556170 TOR1AIP2Q8NFQ8 470 aa13.72□□□□□ -0.21
NEK9-209ENST00000556170 MAN2C1Q9NTJ4 1040 aa13.72□□□□□ -0.21
NEK9-209ENST00000556170 PTPRZ1P23471 2315 aaPredicted RBP13.72□□□□□ -0.21
NEK9-209ENST00000556170 ANAPC1Q9H1A4 1944 aa13.72□□□□□ -0.21
NEK9-209ENST00000556170 SMAD9O15198 467 aaKnown RBP13.72□□□□□ -0.21
NEK9-209ENST00000556170 MAS1P04201 325 aa13.72□□□□□ -0.21
NEK9-209ENST00000556170 GDI2P50395 445 aaKnown RBP13.72□□□□□ -0.21
NEK9-209ENST00000556170 VASPP50552 380 aaPredicted RBP13.72□□□□□ -0.21
NEK9-209ENST00000556170 RAB38P57729 211 aa13.72□□□□□ -0.21
NEK9-209ENST00000556170 MLC1Q15049 377 aa13.72□□□□□ -0.21
NEK9-209ENST00000556170 GFOD2Q3B7J2 385 aa13.72□□□□□ -0.21
NEK9-209ENST00000556170 MRM1Q6IN84 353 aaKnown RBP13.72□□□□□ -0.21
NEK9-209ENST00000556170 ZAR1Q86SH2 424 aa13.72□□□□□ -0.21
NEK9-209ENST00000556170 THAP4Q8WY91 577 aa13.72□□□□□ -0.21
NEK9-209ENST00000556170 RASD2Q96D21 266 aa13.72□□□□□ -0.21
NEK9-209ENST00000556170 TSSK2Q96PF2 358 aa13.72□□□□□ -0.21
NEK9-209ENST00000556170 FYTTD1Q96QD9 318 aaKnown RBP13.72□□□□□ -0.21
NEK9-209ENST00000556170 NUDT15Q9NV35 164 aa13.72□□□□□ -0.21
NEK9-209ENST00000556170 UGT2A1Q9Y4X1 527 aa13.72□□□□□ -0.21
NEK9-209ENST00000556170 NCOR1O75376 2440 aa13.71□□□□□ -0.21
NEK9-209ENST00000556170 TMEM129A0AVI4 362 aa13.71□□□□□ -0.21
NEK9-209ENST00000556170 POLR1CO15160 346 aaPredicted RBP13.71□□□□□ -0.21
NEK9-209ENST00000556170 PEPDP12955 493 aa13.71□□□□□ -0.21
NEK9-209ENST00000556170 PRKCAP17252 672 aa13.71□□□□□ -0.21
NEK9-209ENST00000556170 DHPSP49366 369 aaPredicted RBP13.71□□□□□ -0.21
NEK9-209ENST00000556170 GFERP55789 205 aa13.71□□□□□ -0.21
NEK9-209ENST00000556170 SQSTM1Q13501 440 aa13.71□□□□□ -0.21
NEK9-209ENST00000556170 RCBTB1Q8NDN9 531 aa13.71□□□□□ -0.21
NEK9-209ENST00000556170 TMEM52Q8NDY8 209 aa13.71□□□□□ -0.21
NEK9-209ENST00000556170 BARHL1Q9BZE3 327 aa13.71□□□□□ -0.21
NEK9-209ENST00000556170 DUSP22Q9NRW4 184 aa13.71□□□□□ -0.21
NEK9-209ENST00000556170 CHST2Q9Y4C5 530 aa13.71□□□□□ -0.21
NEK9-209ENST00000556170 RP1P56715 2156 aa13.71□□□□□ -0.21
NEK9-209ENST00000556170 SPARCP09486 303 aa13.71□□□□□ -0.21
NEK9-209ENST00000556170 CPEP16870 476 aa13.71□□□□□ -0.21
NEK9-209ENST00000556170 EMDP50402 254 aa13.71□□□□□ -0.21
NEK9-209ENST00000556170 OR10A3P58181 314 aa13.71□□□□□ -0.21
NEK9-209ENST00000556170 TAS2R43P59537 309 aa13.71□□□□□ -0.21
NEK9-209ENST00000556170 ZP2Q05996 745 aa13.71□□□□□ -0.21
NEK9-209ENST00000556170 PLCXD2Q0VAA5 305 aa13.71□□□□□ -0.21
NEK9-209ENST00000556170 GRM7Q14831 915 aa13.71□□□□□ -0.21
NEK9-209ENST00000556170 KIAA0895LQ68EN5 471 aa13.71□□□□□ -0.21
NEK9-209ENST00000556170 THSD4Q6ZMP0 1018 aa13.71□□□□□ -0.21
NEK9-209ENST00000556170 SLC29A4Q7RTT9 530 aa13.71□□□□□ -0.21
NEK9-209ENST00000556170 ZDHHC12Q96GR4 267 aa13.71□□□□□ -0.21
NEK9-209ENST00000556170 AICDAQ9GZX7 198 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 77 ms