RNA–Protein interactions for RNA: ENST00000554584.5

SYNE2-212, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 5 BASIC

Gene SYNE2, Length 20,508 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-212ENST00000554584 HERC3Q15034 1050 aa3.09□□□□□ -1.91
SYNE2-212ENST00000554584 DCAF12L1Q5VU92 463 aa3.09□□□□□ -1.91
SYNE2-212ENST00000554584 FBXL22Q6P050 247 aa3.09□□□□□ -1.91
SYNE2-212ENST00000554584 DHRS13Q6UX07 377 aa3.09□□□□□ -1.91
SYNE2-212ENST00000554584 PXKQ7Z7A4 578 aa3.09□□□□□ -1.91
SYNE2-212ENST00000554584 FITM2Q8N6M3 262 aa3.09□□□□□ -1.91
SYNE2-212ENST00000554584 RHEBL1Q8TAI7 183 aa3.09□□□□□ -1.91
SYNE2-212ENST00000554584 TRAPPC2LQ9UL33 140 aa3.09□□□□□ -1.91
SYNE2-212ENST00000554584 CDH10Q9Y6N8 788 aa3.09□□□□□ -1.91
SYNE2-212ENST00000554584 TGOLN2O43493 480 aa3.09□□□□□ -1.91
SYNE2-212ENST00000554584 SLC10A6Q3KNW5 377 aa3.09□□□□□ -1.91
SYNE2-212ENST00000554584 GLT8D1Q68CQ7 371 aa3.09□□□□□ -1.91
SYNE2-212ENST00000554584 SLC24A5Q71RS6 500 aa3.09□□□□□ -1.91
SYNE2-212ENST00000554584 MRPL41Q8IXM3 137 aaKnown RBP3.09□□□□□ -1.91
SYNE2-212ENST00000554584 TMEM86AQ8N2M4 240 aa3.09□□□□□ -1.91
SYNE2-212ENST00000554584 TMIEQ8NEW7 156 aa3.09□□□□□ -1.91
SYNE2-212ENST00000554584 GPR119Q8TDV5 335 aa3.09□□□□□ -1.91
SYNE2-212ENST00000554584 SECISBP2Q96T21 854 aaKnown RBP3.09□□□□□ -1.91
SYNE2-212ENST00000554584 DUSP16Q9BY84 665 aa3.09□□□□□ -1.91
SYNE2-212ENST00000554584 DHCR7Q9UBM7 475 aaKnown RBP3.09□□□□□ -1.91
SYNE2-212ENST00000554584 NAV1Q8NEY1 1877 aa3.09□□□□□ -1.91
SYNE2-212ENST00000554584 JRKO75564 520 aa3.09□□□□□ -1.91
SYNE2-212ENST00000554584 MPIP34949 423 aa3.09□□□□□ -1.91
SYNE2-212ENST00000554584 GK3PQ14409 553 aa3.09□□□□□ -1.91
SYNE2-212ENST00000554584 IGSF11Q5DX21 431 aa3.09□□□□□ -1.91
SYNE2-212ENST00000554584 PRR31Q5SQ13 230 aa3.09□□□□□ -1.91
SYNE2-212ENST00000554584 ATP1A1-AS1Q5TC04 95 aa3.09□□□□□ -1.91
SYNE2-212ENST00000554584 XYLT1Q86Y38 959 aa3.09□□□□□ -1.91
SYNE2-212ENST00000554584 SLCO2A1Q92959 643 aa3.09□□□□□ -1.91
SYNE2-212ENST00000554584 MIB2Q96AX9 1013 aa3.09□□□□□ -1.91
SYNE2-212ENST00000554584 ZMYND19Q96E35 227 aaPredicted RBP3.09□□□□□ -1.91
SYNE2-212ENST00000554584 CADM1Q9BY67 442 aaKnown RBP3.09□□□□□ -1.91
SYNE2-212ENST00000554584 RIOX1Q9H6W3 641 aa3.09□□□□□ -1.91
SYNE2-212ENST00000554584 GPR173Q9NS66 373 aa3.09□□□□□ -1.91
SYNE2-212ENST00000554584 IGHV3OR16-13A0A075B7E8 117 aa3.09□□□□□ -1.91
SYNE2-212ENST00000554584 IGHV3-74A0A0B4J1X5 117 aa3.09□□□□□ -1.91
SYNE2-212ENST00000554584 A0A1W2PPE3 182 aa3.09□□□□□ -1.91
SYNE2-212ENST00000554584 ADAM20O43506 726 aa3.09□□□□□ -1.91
SYNE2-212ENST00000554584 SPRY3O43610 288 aa3.09□□□□□ -1.91
SYNE2-212ENST00000554584 GAAP10253 952 aa3.09□□□□□ -1.91
SYNE2-212ENST00000554584 RGRP47804 291 aa3.09□□□□□ -1.91
SYNE2-212ENST00000554584 ZNF77Q15935 545 aa3.09□□□□□ -1.91
SYNE2-212ENST00000554584 LGI4Q8N135 537 aa3.09□□□□□ -1.91
SYNE2-212ENST00000554584 MAFAQ8NHW3 353 aaPredicted RBP3.09□□□□□ -1.91
SYNE2-212ENST00000554584 PTPMT1Q8WUK0 201 aaPredicted RBP3.09□□□□□ -1.91
SYNE2-212ENST00000554584 TSNAXQ99598 290 aaKnown RBP3.09□□□□□ -1.91
SYNE2-212ENST00000554584 TIMP4Q99727 224 aa3.09□□□□□ -1.91
SYNE2-212ENST00000554584 ALOXE3Q9BYJ1 711 aa3.09□□□□□ -1.91
SYNE2-212ENST00000554584 TMEM184CQ9NVA4 438 aa3.09□□□□□ -1.91
SYNE2-212ENST00000554584 INSL5Q9Y5Q6 135 aa3.09□□□□□ -1.91
SYNE2-212ENST00000554584 PRSS21Q9Y6M0 314 aa3.09□□□□□ -1.91
SYNE2-212ENST00000554584 IGHV3-49A0A0A0MS15 119 aa3.09□□□□□ -1.91
SYNE2-212ENST00000554584 PRMT5O14744 637 aaPredicted RBP3.09□□□□□ -1.91
SYNE2-212ENST00000554584 PDGFBP01127 241 aaPredicted RBP3.09□□□□□ -1.91
SYNE2-212ENST00000554584 FABP4P15090 132 aa3.09□□□□□ -1.91
SYNE2-212ENST00000554584 C18orf63Q68DL7 685 aa3.09□□□□□ -1.91
SYNE2-212ENST00000554584 ASPGQ86U10 573 aa3.09□□□□□ -1.91
SYNE2-212ENST00000554584 OR9A4Q8NGU2 314 aa3.09□□□□□ -1.91
SYNE2-212ENST00000554584 SHKBP1Q8TBC3 707 aa3.09□□□□□ -1.91
SYNE2-212ENST00000554584 GLYATL1Q969I3 302 aa3.09□□□□□ -1.91
SYNE2-212ENST00000554584 MPZL2O60487 215 aa3.09□□□□□ -1.91
SYNE2-212ENST00000554584 PROS1P07225 676 aa3.09□□□□□ -1.91
SYNE2-212ENST00000554584 SYPP08247 313 aa3.09□□□□□ -1.91
SYNE2-212ENST00000554584 SLC10A3P09131 477 aa3.09□□□□□ -1.91
SYNE2-212ENST00000554584 PSMB2P49721 201 aa3.09□□□□□ -1.91
SYNE2-212ENST00000554584 VASPP50552 380 aaPredicted RBP3.09□□□□□ -1.91
SYNE2-212ENST00000554584 HCCSP53701 268 aa3.09□□□□□ -1.91
SYNE2-212ENST00000554584 PNLIPRP2P54317 469 aa3.09□□□□□ -1.91
SYNE2-212ENST00000554584 RIPPLY3P57055 190 aa3.09□□□□□ -1.91
SYNE2-212ENST00000554584 EEF1AKMT2Q5JPI9 291 aaKnown RBP3.09□□□□□ -1.91
SYNE2-212ENST00000554584 PRAMEF8Q5VWM4 474 aa3.09□□□□□ -1.91
SYNE2-212ENST00000554584 PRAMEF7Q5VXH5 474 aa3.09□□□□□ -1.91
SYNE2-212ENST00000554584 ZFP62Q8NB50 900 aaPredicted RBP3.09□□□□□ -1.91
SYNE2-212ENST00000554584 ABHD3Q8WU67 409 aa3.09□□□□□ -1.91
SYNE2-212ENST00000554584 C6orf106Q9H6K1 298 aaPredicted RBP3.09□□□□□ -1.91
SYNE2-212ENST00000554584 CUTCQ9NTM9 273 aa3.09□□□□□ -1.91
SYNE2-212ENST00000554584 ARMC1Q9NVT9 282 aa3.09□□□□□ -1.91
SYNE2-212ENST00000554584 UBQLN2Q9UHD9 624 aa3.09□□□□□ -1.91
SYNE2-212ENST00000554584 NXT1Q9UKK6 140 aaKnown RBP3.09□□□□□ -1.91
SYNE2-212ENST00000554584 VWA7Q9Y334 891 aa3.09□□□□□ -1.91
SYNE2-212ENST00000554584 IQGAP1P46940 1657 aa3.09□□□□□ -1.91
SYNE2-212ENST00000554584 PPRC1Q5VV67 1664 aaKnown RBP3.09□□□□□ -1.91
SYNE2-212ENST00000554584 NAGAP17050 411 aa3.09□□□□□ -1.91
SYNE2-212ENST00000554584 EVI2BP34910 448 aa3.09□□□□□ -1.91
SYNE2-212ENST00000554584 CXCL12P48061 93 aa3.09□□□□□ -1.91
SYNE2-212ENST00000554584 ADAM15Q13444 863 aa3.09□□□□□ -1.91
SYNE2-212ENST00000554584 FAHD2BQ6P2I3 314 aaPredicted RBP3.09□□□□□ -1.91
SYNE2-212ENST00000554584 GLB1L3Q8NCI6 653 aaPredicted RBP3.09□□□□□ -1.91
SYNE2-212ENST00000554584 OR4A16Q8NH70 328 aa3.09□□□□□ -1.91
SYNE2-212ENST00000554584 TMEM234Q8WY98 164 aa3.09□□□□□ -1.91
SYNE2-212ENST00000554584 MISP3Q96FF7 219 aa3.09□□□□□ -1.91
SYNE2-212ENST00000554584 FAHD2AQ96GK7 314 aa3.09□□□□□ -1.91
SYNE2-212ENST00000554584 BCL7BQ9BQE9 202 aa3.09□□□□□ -1.91
SYNE2-212ENST00000554584 SAMD10Q9BYL1 202 aa3.09□□□□□ -1.91
SYNE2-212ENST00000554584 QPCTLQ9NXS2 382 aa3.09□□□□□ -1.91
SYNE2-212ENST00000554584 PTPRMP28827 1452 aa3.09□□□□□ -1.91
SYNE2-212ENST00000554584 DEFB108AA8MXU0 73 aa3.09□□□□□ -1.91
SYNE2-212ENST00000554584 NXPH2O95156 264 aa3.09□□□□□ -1.91
SYNE2-212ENST00000554584 S100PP25815 95 aa3.09□□□□□ -1.91
SYNE2-212ENST00000554584 ERVFC1P60507 584 aa3.09□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms