RNA–Protein interactions for RNA: ENST00000554264.5

VPS33B-203, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 4

Gene VPS33B, Length 389 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-203ENST00000554264 GASTP01350 101 aa5.47□□□□□ -1.53
VPS33B-203ENST00000554264 WNT1P04628 370 aa5.47□□□□□ -1.53
VPS33B-203ENST00000554264 HMGN1P05114 100 aa5.47□□□□□ -1.53
VPS33B-203ENST00000554264 ETFAP13804 333 aa5.47□□□□□ -1.53
VPS33B-203ENST00000554264 GYPEP15421 78 aa5.47□□□□□ -1.53
VPS33B-203ENST00000554264 DDCP20711 480 aa5.47□□□□□ -1.53
VPS33B-203ENST00000554264 C5AR1P21730 350 aa5.47□□□□□ -1.53
VPS33B-203ENST00000554264 AQP1P29972 269 aa5.47□□□□□ -1.53
VPS33B-203ENST00000554264 SOAT1P35610 550 aa5.47□□□□□ -1.53
VPS33B-203ENST00000554264 TGFBR1P36897 503 aa5.47□□□□□ -1.53
VPS33B-203ENST00000554264 FRKP42685 505 aaPredicted RBP5.47□□□□□ -1.53
VPS33B-203ENST00000554264 SLC6A9P48067 706 aa5.47□□□□□ -1.53
VPS33B-203ENST00000554264 KCNJ5P48544 419 aa5.47□□□□□ -1.53
VPS33B-203ENST00000554264 KHKP50053 298 aa5.47□□□□□ -1.53
VPS33B-203ENST00000554264 CCR5P51681 352 aa5.47□□□□□ -1.53
VPS33B-203ENST00000554264 SGSHP51688 502 aa5.47□□□□□ -1.53
VPS33B-203ENST00000554264 NKX2-5P52952 324 aaPredicted RBP5.47□□□□□ -1.53
VPS33B-203ENST00000554264 CRISP3P54108 245 aa5.47□□□□□ -1.53
VPS33B-203ENST00000554264 TAS2R43P59537 309 aa5.47□□□□□ -1.53
VPS33B-203ENST00000554264 PITPNAQ00169 270 aa5.47□□□□□ -1.53
VPS33B-203ENST00000554264 CDK5Q00535 292 aa5.47□□□□□ -1.53
VPS33B-203ENST00000554264 B4GALNT1Q00973 533 aa5.47□□□□□ -1.53
VPS33B-203ENST00000554264 GALK2Q01415 458 aa5.47□□□□□ -1.53
VPS33B-203ENST00000554264 C2orf80Q0P641 193 aa5.47□□□□□ -1.53
VPS33B-203ENST00000554264 HNRNPA0Q13151 305 aaKnown RBP5.47□□□□□ -1.53
VPS33B-203ENST00000554264 RPA4Q13156 261 aa5.47□□□□□ -1.53
VPS33B-203ENST00000554264 NAE1Q13564 534 aa5.47□□□□□ -1.53
VPS33B-203ENST00000554264 LY6DQ14210 128 aa5.47□□□□□ -1.53
VPS33B-203ENST00000554264 ARHGAP19Q14CB8 494 aa5.47□□□□□ -1.53
VPS33B-203ENST00000554264 SHBQ15464 509 aa5.47□□□□□ -1.53
VPS33B-203ENST00000554264 TATDN3Q17R31 274 aa5.47□□□□□ -1.53
VPS33B-203ENST00000554264 SLC5A12Q1EHB4 618 aa5.47□□□□□ -1.53
VPS33B-203ENST00000554264 WSCD2Q2TBF2 565 aa5.47□□□□□ -1.53
VPS33B-203ENST00000554264 PRAMEF14Q5SWL7 426 aa5.47□□□□□ -1.53
VPS33B-203ENST00000554264 LCE5AQ5TCM9 118 aa5.47□□□□□ -1.53
VPS33B-203ENST00000554264 NXNL2Q5VZ03 156 aa5.47□□□□□ -1.53
VPS33B-203ENST00000554264 MBNL2Q5VZF2 373 aaKnown RBP5.47□□□□□ -1.53
VPS33B-203ENST00000554264 FAM219BQ5XKK7 198 aa5.47□□□□□ -1.53
VPS33B-203ENST00000554264 TMEM215Q68D42 235 aa5.47□□□□□ -1.53
VPS33B-203ENST00000554264 RPL13AP3Q6NVV1 102 aa5.47□□□□□ -1.53
VPS33B-203ENST00000554264 CDC73Q6P1J9 531 aa5.47□□□□□ -1.53
VPS33B-203ENST00000554264 SLC27A4Q6P1M0 643 aa5.47□□□□□ -1.53
VPS33B-203ENST00000554264 C1orf94Q6P1W5 598 aa5.47□□□□□ -1.53
VPS33B-203ENST00000554264 PGBD2Q6P3X8 592 aa5.47□□□□□ -1.53
VPS33B-203ENST00000554264 LCTLQ6UWM7 567 aa5.47□□□□□ -1.53
VPS33B-203ENST00000554264 PAMR1Q6UXH9 720 aa5.47□□□□□ -1.53
VPS33B-203ENST00000554264 GDPD4Q6W3E5 623 aa5.47□□□□□ -1.53
VPS33B-203ENST00000554264 TMEM64Q6YI46 380 aa5.47□□□□□ -1.53
VPS33B-203ENST00000554264 DPY19L3Q6ZPD9 716 aa5.47□□□□□ -1.53
VPS33B-203ENST00000554264 LRRC28Q86X40 367 aaPredicted RBP5.47□□□□□ -1.53
VPS33B-203ENST00000554264 LURAP1LQ8IV03 231 aa5.47□□□□□ -1.53
VPS33B-203ENST00000554264 GID4Q8IVV7 300 aa5.47□□□□□ -1.53
VPS33B-203ENST00000554264 Q8N402 240 aa5.47□□□□□ -1.53
VPS33B-203ENST00000554264 RAB42Q8N4Z0 105 aa5.47□□□□□ -1.53
VPS33B-203ENST00000554264 LRRC17Q8N6Y2 441 aa5.47□□□□□ -1.53
VPS33B-203ENST00000554264 TTLQ8NG68 377 aa5.47□□□□□ -1.53
VPS33B-203ENST00000554264 OR9Q2Q8NGE9 314 aa5.47□□□□□ -1.53
VPS33B-203ENST00000554264 OR52J3Q8NH60 311 aa5.47□□□□□ -1.53
VPS33B-203ENST00000554264 GNPDA2Q8TDQ7 276 aa5.47□□□□□ -1.53
VPS33B-203ENST00000554264 GANCQ8TET4 914 aa5.47□□□□□ -1.53
VPS33B-203ENST00000554264 C16orf78Q8WTQ4 265 aa5.47□□□□□ -1.53
VPS33B-203ENST00000554264 C15orf40Q8WUR7 153 aa5.47□□□□□ -1.53
VPS33B-203ENST00000554264 SLC5A11Q8WWX8 675 aa5.47□□□□□ -1.53
VPS33B-203ENST00000554264 DEDD2Q8WXF8 326 aa5.47□□□□□ -1.53
VPS33B-203ENST00000554264 OSTF1Q92882 214 aa5.47□□□□□ -1.53
VPS33B-203ENST00000554264 PRRC1Q96M27 445 aa5.47□□□□□ -1.53
VPS33B-203ENST00000554264 OR2M2Q96R28 347 aa5.47□□□□□ -1.53
VPS33B-203ENST00000554264 MTERF1Q99551 399 aaKnown RBP5.47□□□□□ -1.53
VPS33B-203ENST00000554264 MYOCQ99972 504 aa5.47□□□□□ -1.53
VPS33B-203ENST00000554264 FUZQ9BT04 418 aa5.47□□□□□ -1.53
VPS33B-203ENST00000554264 TMEM43Q9BTV4 400 aa5.47□□□□□ -1.53
VPS33B-203ENST00000554264 FNDC11Q9BVV2 318 aa5.47□□□□□ -1.53
VPS33B-203ENST00000554264 BARHL1Q9BZE3 327 aa5.47□□□□□ -1.53
VPS33B-203ENST00000554264 TM6SF2Q9BZW4 377 aa5.47□□□□□ -1.53
VPS33B-203ENST00000554264 SEMA4CQ9C0C4 833 aa5.47□□□□□ -1.53
VPS33B-203ENST00000554264 C11orf54Q9H0W9 315 aaPredicted RBP5.47□□□□□ -1.53
VPS33B-203ENST00000554264 RSPH9Q9H1X1 276 aaPredicted RBP5.47□□□□□ -1.53
VPS33B-203ENST00000554264 RHBGQ9H310 441 aa5.47□□□□□ -1.53
VPS33B-203ENST00000554264 DPEP2Q9H4A9 486 aa5.47□□□□□ -1.53
VPS33B-203ENST00000554264 C12orf10Q9HB07 376 aa5.47□□□□□ -1.53
VPS33B-203ENST00000554264 AMBNQ9NP70 447 aa5.47□□□□□ -1.53
VPS33B-203ENST00000554264 ABCB9Q9NP78 766 aa5.47□□□□□ -1.53
VPS33B-203ENST00000554264 GIMAP4Q9NUV9 329 aa5.47□□□□□ -1.53
VPS33B-203ENST00000554264 RLIMQ9NVW2 624 aa5.47□□□□□ -1.53
VPS33B-203ENST00000554264 SEC14L3Q9UDX4 400 aa5.47□□□□□ -1.53
VPS33B-203ENST00000554264 PLEKHB1Q9UF11 243 aaPredicted RBP5.47□□□□□ -1.53
VPS33B-203ENST00000554264 CLEC4EQ9ULY5 219 aa5.47□□□□□ -1.53
VPS33B-203ENST00000554264 LIPT1Q9Y234 373 aa5.47□□□□□ -1.53
VPS33B-203ENST00000554264 ACTL7AQ9Y615 435 aa5.47□□□□□ -1.53
VPS33B-203ENST00000554264 SPIN1Q9Y657 262 aaPredicted RBP5.47□□□□□ -1.53
VPS33B-203ENST00000554264 KNTC1P50748 2209 aa5.47□□□□□ -1.53
VPS33B-203ENST00000554264 CABIN1Q9Y6J0 2220 aa5.47□□□□□ -1.53
VPS33B-203ENST00000554264 BPTFQ12830 3046 aa5.47□□□□□ -1.53
VPS33B-203ENST00000554264 CKAP5Q14008 2032 aa5.47□□□□□ -1.53
VPS33B-203ENST00000554264 KALRNO60229 2985 aa5.46□□□□□ -1.53
VPS33B-203ENST00000554264 ARPC4-TTLL3A0A0A6YYG9 625 aa5.46□□□□□ -1.54
VPS33B-203ENST00000554264 PRAMEF33A0A0G2JMD5 474 aa5.46□□□□□ -1.54
VPS33B-203ENST00000554264 A0A0G2JPF8 293 aa5.46□□□□□ -1.54
VPS33B-203ENST00000554264 KRTAP23-1A1A580 65 aa5.46□□□□□ -1.54
VPS33B-203ENST00000554264 LINC00862A6NCI5 91 aa5.46□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms