RNA–Protein interactions for RNA: ENST00000553989.1

TDP1-208, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 728 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-208ENST00000553989 GPR141Q7Z602 305 aa7.93□□□□□ -1.14
TDP1-208ENST00000553989 AMIGO2Q86SJ2 522 aa7.93□□□□□ -1.14
TDP1-208ENST00000553989 MARCH3Q86UD3 253 aa7.93□□□□□ -1.14
TDP1-208ENST00000553989 WFDC8Q8IUA0 241 aa7.93□□□□□ -1.14
TDP1-208ENST00000553989 FADS6Q8N9I5 356 aa7.93□□□□□ -1.14
TDP1-208ENST00000553989 GLB1L3Q8NCI6 653 aaPredicted RBP7.93□□□□□ -1.14
TDP1-208ENST00000553989 FAM156AQ8NDB6 213 aa7.93□□□□□ -1.14
TDP1-208ENST00000553989 OR52E4Q8NGH9 312 aa7.93□□□□□ -1.14
TDP1-208ENST00000553989 ZNF420Q8TAQ5 688 aaPredicted RBP7.93□□□□□ -1.14
TDP1-208ENST00000553989 C1GALT1C1Q96EU7 318 aa7.93□□□□□ -1.14
TDP1-208ENST00000553989 RDH12Q96NR8 316 aa7.93□□□□□ -1.14
TDP1-208ENST00000553989 MDFIQ99750 246 aa7.93□□□□□ -1.14
TDP1-208ENST00000553989 SLC29A1Q99808 456 aa7.93□□□□□ -1.14
TDP1-208ENST00000553989 KCTD14Q9BQ13 255 aaPredicted RBP7.93□□□□□ -1.14
TDP1-208ENST00000553989 OSBPL10Q9BXB5 764 aa7.93□□□□□ -1.14
TDP1-208ENST00000553989 GSX2Q9BZM3 304 aa7.93□□□□□ -1.14
TDP1-208ENST00000553989 RBM38Q9H0Z9 239 aaKnown RBP7.93□□□□□ -1.14
TDP1-208ENST00000553989 SEMA6AQ9H2E6 1030 aa7.93□□□□□ -1.14
TDP1-208ENST00000553989 TNFRSF12AQ9NP84 129 aa7.93□□□□□ -1.14
TDP1-208ENST00000553989 FAM120CQ9NX05 1096 aaKnown RBP7.93□□□□□ -1.14
TDP1-208ENST00000553989 CMTM6Q9NX76 183 aa7.93□□□□□ -1.14
TDP1-208ENST00000553989 FLRT3Q9NZU0 649 aa7.93□□□□□ -1.14
TDP1-208ENST00000553989 MAGEL2Q9UJ55 1249 aa7.93□□□□□ -1.14
TDP1-208ENST00000553989 ZNF225Q9UK10 706 aa7.93□□□□□ -1.14
TDP1-208ENST00000553989 MCTS1Q9ULC4 181 aaKnown RBP7.93□□□□□ -1.14
TDP1-208ENST00000553989 CLEC4AQ9UMR7 237 aa7.93□□□□□ -1.14
TDP1-208ENST00000553989 VDAC3Q9Y277 283 aa7.93□□□□□ -1.14
TDP1-208ENST00000553989 FN1P02751 2386 aaKnown RBP7.93□□□□□ -1.14
TDP1-208ENST00000553989 VPS13CQ709C8 3753 aa7.92□□□□□ -1.14
TDP1-208ENST00000553989 B4DXG7 233 aa7.92□□□□□ -1.14
TDP1-208ENST00000553989 SHISA8B8ZZ34 492 aa7.92□□□□□ -1.14
TDP1-208ENST00000553989 H3BSA7 217 aa7.92□□□□□ -1.14
TDP1-208ENST00000553989 CLOCKO15516 846 aa7.92□□□□□ -1.14
TDP1-208ENST00000553989 TIPRLO75663 272 aa7.92□□□□□ -1.14
TDP1-208ENST00000553989 AQP8O94778 261 aa7.92□□□□□ -1.14
TDP1-208ENST00000553989 KCNH1O95259 989 aa7.92□□□□□ -1.14
TDP1-208ENST00000553989 SYNGR4O95473 234 aa7.92□□□□□ -1.14
TDP1-208ENST00000553989 CGAP01215 116 aa7.92□□□□□ -1.14
TDP1-208ENST00000553989 NID1P14543 1247 aa7.92□□□□□ -1.14
TDP1-208ENST00000553989 PPP3CBP16298 524 aa7.92□□□□□ -1.14
TDP1-208ENST00000553989 CDH2P19022 906 aaPredicted RBP7.92□□□□□ -1.14
TDP1-208ENST00000553989 DDCP20711 480 aa7.92□□□□□ -1.14
TDP1-208ENST00000553989 GSTM5P46439 218 aa7.92□□□□□ -1.14
TDP1-208ENST00000553989 GSK3BP49841 420 aa7.92□□□□□ -1.14
TDP1-208ENST00000553989 HTR6P50406 440 aa7.92□□□□□ -1.14
TDP1-208ENST00000553989 RAE1P78406 368 aaKnown RBP7.92□□□□□ -1.14
TDP1-208ENST00000553989 C2orf80Q0P641 193 aa7.92□□□□□ -1.14
TDP1-208ENST00000553989 TOP3AQ13472 1001 aaPredicted RBP7.92□□□□□ -1.14
TDP1-208ENST00000553989 DCTN2Q13561 401 aaKnown RBP7.92□□□□□ -1.14
TDP1-208ENST00000553989 VEZF1Q14119 521 aa7.92□□□□□ -1.14
TDP1-208ENST00000553989 NRF1Q16656 503 aa7.92□□□□□ -1.14
TDP1-208ENST00000553989 FAM98BQ52LJ0 330 aaKnown RBP7.92□□□□□ -1.14
TDP1-208ENST00000553989 XKR7Q5GH72 579 aa7.92□□□□□ -1.14
TDP1-208ENST00000553989 C6orf136Q5SQH8 315 aa7.92□□□□□ -1.14
TDP1-208ENST00000553989 HMBOX1Q6NT76 420 aa7.92□□□□□ -1.14
TDP1-208ENST00000553989 SZRD1Q7Z422 152 aa7.92□□□□□ -1.14
TDP1-208ENST00000553989 PATL1Q86TB9 770 aaKnown RBP7.92□□□□□ -1.14
TDP1-208ENST00000553989 STK32CQ86UX6 486 aa7.92□□□□□ -1.14
TDP1-208ENST00000553989 ADGRG5Q8IZF4 528 aa7.92□□□□□ -1.14
TDP1-208ENST00000553989 CBR4Q8N4T8 237 aa7.92□□□□□ -1.14
TDP1-208ENST00000553989 METTL25Q8N6Q8 603 aa7.92□□□□□ -1.14
TDP1-208ENST00000553989 OR8J3Q8NGG0 315 aa7.92□□□□□ -1.14
TDP1-208ENST00000553989 OR6K3Q8NGY3 331 aa7.92□□□□□ -1.14
TDP1-208ENST00000553989 DUSP19Q8WTR2 217 aa7.92□□□□□ -1.14
TDP1-208ENST00000553989 RNF138Q8WVD3 245 aa7.92□□□□□ -1.14
TDP1-208ENST00000553989 SLC9A6Q92581 669 aa7.92□□□□□ -1.14
TDP1-208ENST00000553989 VPS33AQ96AX1 596 aa7.92□□□□□ -1.14
TDP1-208ENST00000553989 ITPKCQ96DU7 683 aa7.92□□□□□ -1.14
TDP1-208ENST00000553989 PLPPR2Q96GM1 343 aa7.92□□□□□ -1.14
TDP1-208ENST00000553989 CIB1Q99828 191 aa7.92□□□□□ -1.14
TDP1-208ENST00000553989 GRIP2Q9C0E4 1043 aa7.92□□□□□ -1.14
TDP1-208ENST00000553989 TUBB1Q9H4B7 451 aa7.92□□□□□ -1.14
TDP1-208ENST00000553989 GORASP2Q9H8Y8 452 aa7.92□□□□□ -1.14
TDP1-208ENST00000553989 C3orf14Q9HBI5 128 aa7.92□□□□□ -1.14
TDP1-208ENST00000553989 EQTNQ9NQ60 294 aa7.92□□□□□ -1.14
TDP1-208ENST00000553989 AURKCQ9UQB9 309 aa7.92□□□□□ -1.14
TDP1-208ENST00000553989 TIMM22Q9Y584 194 aa7.92□□□□□ -1.14
TDP1-208ENST00000553989 HIVEP2P31629 2446 aa7.91□□□□□ -1.14
TDP1-208ENST00000553989 A0A087WV62 115 aa7.91□□□□□ -1.14
TDP1-208ENST00000553989 ARPC2O15144 300 aa7.91□□□□□ -1.14
TDP1-208ENST00000553989 RGS14O43566 566 aa7.91□□□□□ -1.14
TDP1-208ENST00000553989 FADS1O60427 444 aa7.91□□□□□ -1.14
TDP1-208ENST00000553989 DEAF1O75398 565 aaPredicted RBP7.91□□□□□ -1.14
TDP1-208ENST00000553989 SLITRK5O94991 958 aa7.91□□□□□ -1.14
TDP1-208ENST00000553989 UTS2O95399 124 aa7.91□□□□□ -1.14
TDP1-208ENST00000553989 IL33O95760 270 aa7.91□□□□□ -1.14
TDP1-208ENST00000553989 ANGPTL1O95841 491 aa7.91□□□□□ -1.14
TDP1-208ENST00000553989 HPRP00739 348 aa7.91□□□□□ -1.14
TDP1-208ENST00000553989 IL6P05231 212 aa7.91□□□□□ -1.14
TDP1-208ENST00000553989 GABRA3P34903 492 aa7.91□□□□□ -1.14
TDP1-208ENST00000553989 GPC1P35052 558 aa7.91□□□□□ -1.14
TDP1-208ENST00000553989 CAPGP40121 348 aa7.91□□□□□ -1.14
TDP1-208ENST00000553989 RPS6KA3P51812 740 aa7.91□□□□□ -1.14
TDP1-208ENST00000553989 ZNF41P51814 821 aaPredicted RBP7.91□□□□□ -1.14
TDP1-208ENST00000553989 CHRNB3Q05901 458 aa7.91□□□□□ -1.14
TDP1-208ENST00000553989 C17orf67Q0P5P2 114 aa7.91□□□□□ -1.14
TDP1-208ENST00000553989 HSPB3Q12988 150 aa7.91□□□□□ -1.14
TDP1-208ENST00000553989 CYP51A1Q16850 503 aa7.91□□□□□ -1.14
TDP1-208ENST00000553989 TTC23Q5W5X9 447 aa7.91□□□□□ -1.14
TDP1-208ENST00000553989 GLYATQ6IB77 296 aa7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms