RNA–Protein interactions for RNA: ENST00000553599.5

PSEN1-207, Transcript of presenilin 1, humanhuman

TSL 4

Gene PSEN1, Length 591 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-207ENST00000553599 SLC19A3Q9BZV2 496 aa17.45■□□□□ 0.38
PSEN1-207ENST00000553599 NMNAT1Q9HAN9 279 aaPredicted RBP17.45■□□□□ 0.38
PSEN1-207ENST00000553599 SLC7A7Q9UM01 511 aa17.45■□□□□ 0.38
PSEN1-207ENST00000553599 AP4S1Q9Y587 144 aa17.45■□□□□ 0.38
PSEN1-207ENST00000553599 FREM3P0C091 2139 aa17.44■□□□□ 0.38
PSEN1-207ENST00000553599 A0A1W2PRQ8 180 aa17.44■□□□□ 0.38
PSEN1-207ENST00000553599 HTR3EA5X5Y0 456 aa17.44■□□□□ 0.38
PSEN1-207ENST00000553599 A8MVM7 634 aa17.44■□□□□ 0.38
PSEN1-207ENST00000553599 B8ZZF3 427 aa17.44■□□□□ 0.38
PSEN1-207ENST00000553599 H3BML4 177 aa17.44■□□□□ 0.38
PSEN1-207ENST00000553599 FFAR1O14842 300 aa17.44■□□□□ 0.38
PSEN1-207ENST00000553599 BCKDKO14874 412 aa17.44■□□□□ 0.38
PSEN1-207ENST00000553599 HNRNPRO43390 633 aaKnown RBP17.44■□□□□ 0.38
PSEN1-207ENST00000553599 EFNA2O43921 213 aa17.44■□□□□ 0.38
PSEN1-207ENST00000553599 LYPD3O95274 346 aa17.44■□□□□ 0.38
PSEN1-207ENST00000553599 H1F0P07305 194 aaKnown RBP17.44■□□□□ 0.38
PSEN1-207ENST00000553599 FCGR1AP12314 374 aa17.44■□□□□ 0.38
PSEN1-207ENST00000553599 ZNF708P17019 499 aa17.44■□□□□ 0.38
PSEN1-207ENST00000553599 YAP1P46937 504 aaKnown RBP17.44■□□□□ 0.38
PSEN1-207ENST00000553599 LHX2P50458 406 aa17.44■□□□□ 0.38
PSEN1-207ENST00000553599 MLLT10P55197 1068 aa17.44■□□□□ 0.38
PSEN1-207ENST00000553599 RBPJQ06330 500 aa17.44■□□□□ 0.38
PSEN1-207ENST00000553599 DGCR6Q14129 220 aa17.44■□□□□ 0.38
PSEN1-207ENST00000553599 SOWAHCQ53LP3 525 aaPredicted RBP17.44■□□□□ 0.38
PSEN1-207ENST00000553599 SYT14P1Q58G82 188 aa17.44■□□□□ 0.38
PSEN1-207ENST00000553599 ST6GALNAC3Q8NDV1 305 aa17.44■□□□□ 0.38
PSEN1-207ENST00000553599 SLCO4A1Q96BD0 722 aa17.44■□□□□ 0.38
PSEN1-207ENST00000553599 TIMP4Q99727 224 aa17.44■□□□□ 0.38
PSEN1-207ENST00000553599 ZNF426Q9BUY5 554 aa17.44■□□□□ 0.38
PSEN1-207ENST00000553599 POTEKPQ9BYX7 375 aa17.44■□□□□ 0.38
PSEN1-207ENST00000553599 SPRR3Q9UBC9 169 aa17.44■□□□□ 0.38
PSEN1-207ENST00000553599 A0A1B0GTH9 108 aa17.43■□□□□ 0.38
PSEN1-207ENST00000553599 EIF4E1BA6NMX2 242 aaKnown RBP17.43■□□□□ 0.38
PSEN1-207ENST00000553599 ANKRD65E5RJM6 399 aa17.43■□□□□ 0.38
PSEN1-207ENST00000553599 J3KTA2 159 aa17.43■□□□□ 0.38
PSEN1-207ENST00000553599 THY1P04216 161 aa17.43■□□□□ 0.38
PSEN1-207ENST00000553599 PTGS2P35354 604 aa17.43■□□□□ 0.38
PSEN1-207ENST00000553599 SF3B4Q15427 424 aaKnown RBP eCLIP17.43■□□□□ 0.381e-6■■■□□ 16.5
PSEN1-207ENST00000553599 PDSS1Q5T2R2 415 aa17.43■□□□□ 0.38
PSEN1-207ENST00000553599 POMZP3Q6PJE2 187 aa17.43■□□□□ 0.38
PSEN1-207ENST00000553599 GFRALQ6UXV0 394 aa17.43■□□□□ 0.38
PSEN1-207ENST00000553599 ESPNLQ6ZVH7 1005 aa17.43■□□□□ 0.38
PSEN1-207ENST00000553599 MEIOBQ8N635 442 aa17.43■□□□□ 0.38
PSEN1-207ENST00000553599 RNF217Q8TC41 542 aa17.43■□□□□ 0.38
PSEN1-207ENST00000553599 EPYCQ99645 322 aa17.43■□□□□ 0.38
PSEN1-207ENST00000553599 PRDM14Q9GZV8 571 aa17.43■□□□□ 0.38
PSEN1-207ENST00000553599 PAQR5Q9NXK6 330 aaPredicted RBP17.43■□□□□ 0.38
PSEN1-207ENST00000553599 HDGFL3Q9Y3E1 203 aa17.43■□□□□ 0.38
PSEN1-207ENST00000553599 KALRNO60229 2985 aa17.43■□□□□ 0.38
PSEN1-207ENST00000553599 ZNF407Q9C0G0 2248 aa17.42■□□□□ 0.38
PSEN1-207ENST00000553599 TMEM72A0PK05 275 aa17.42■□□□□ 0.38
PSEN1-207ENST00000553599 WISP1O95388 367 aa17.42■□□□□ 0.38
PSEN1-207ENST00000553599 IGF2P01344 180 aa17.42■□□□□ 0.38
PSEN1-207ENST00000553599 IL11P20809 199 aa17.42■□□□□ 0.38
PSEN1-207ENST00000553599 ERFP50548 548 aa17.42■□□□□ 0.38
PSEN1-207ENST00000553599 HMGA2P52926 109 aa17.42■□□□□ 0.38
PSEN1-207ENST00000553599 CLDN18P56856 261 aa17.42■□□□□ 0.38
PSEN1-207ENST00000553599 WLSQ5T9L3 541 aa17.42■□□□□ 0.38
PSEN1-207ENST00000553599 OR2T5Q6IEZ7 315 aa17.42■□□□□ 0.38
PSEN1-207ENST00000553599 TTC33Q6PID6 262 aaPredicted RBP17.42■□□□□ 0.38
PSEN1-207ENST00000553599 OR2T29Q8NH02 315 aa17.42■□□□□ 0.38
PSEN1-207ENST00000553599 KLHL15Q96M94 604 aa17.42■□□□□ 0.38
PSEN1-207ENST00000553599 PRSS27Q9BQR3 290 aa17.42■□□□□ 0.38
PSEN1-207ENST00000553599 MAN2C1Q9NTJ4 1040 aa17.42■□□□□ 0.38
PSEN1-207ENST00000553599 TRAPPC4Q9Y296 219 aa17.42■□□□□ 0.38
PSEN1-207ENST00000553599 OR2T1O43869 369 aa17.41■□□□□ 0.38
PSEN1-207ENST00000553599 NPIPB7O75200 414 aa17.41■□□□□ 0.38
PSEN1-207ENST00000553599 ENTPD5O75356 428 aa17.41■□□□□ 0.38
PSEN1-207ENST00000553599 DEAF1O75398 565 aaPredicted RBP17.41■□□□□ 0.38
PSEN1-207ENST00000553599 WISP2O76076 250 aa17.41■□□□□ 0.38
PSEN1-207ENST00000553599 DIRAS1O95057 198 aa17.41■□□□□ 0.38
PSEN1-207ENST00000553599 GADD45GO95257 159 aa17.41■□□□□ 0.38
PSEN1-207ENST00000553599 CST1P01037 141 aa17.41■□□□□ 0.38
PSEN1-207ENST00000553599 RRM2P31350 389 aa17.41■□□□□ 0.38
PSEN1-207ENST00000553599 RPS3AP61247 264 aaKnown RBP17.41■□□□□ 0.38
PSEN1-207ENST00000553599 HSF1Q00613 529 aa17.41■□□□□ 0.38
PSEN1-207ENST00000553599 SPIBQ01892 262 aa17.41■□□□□ 0.38
PSEN1-207ENST00000553599 TMEM176BQ3YBM2 270 aaPredicted RBP17.41■□□□□ 0.38
PSEN1-207ENST00000553599 GGNQ86UU5 652 aa17.41■□□□□ 0.38
PSEN1-207ENST00000553599 CHERPQ8IWX8 916 aaKnown RBP17.41■□□□□ 0.38
PSEN1-207ENST00000553599 RNF113BQ8IZP6 322 aaKnown RBP17.41■□□□□ 0.38
PSEN1-207ENST00000553599 ZNF843Q8N446 348 aa17.41■□□□□ 0.38
PSEN1-207ENST00000553599 OR6S1Q8NH40 331 aa17.41■□□□□ 0.38
PSEN1-207ENST00000553599 TMEM239Q8WW34 195 aa17.41■□□□□ 0.38
PSEN1-207ENST00000553599 ACOT11Q8WXI4 607 aaPredicted RBP17.41■□□□□ 0.38
PSEN1-207ENST00000553599 STMN2Q93045 179 aa17.41■□□□□ 0.38
PSEN1-207ENST00000553599 WDYHV1Q96HA8 205 aa17.41■□□□□ 0.38
PSEN1-207ENST00000553599 KLHL4Q9C0H6 718 aa17.41■□□□□ 0.38
PSEN1-207ENST00000553599 REEP1Q9H902 201 aa17.41■□□□□ 0.38
PSEN1-207ENST00000553599 TIGARQ9NQ88 270 aa17.41■□□□□ 0.38
PSEN1-207ENST00000553599 RHCGQ9UBD6 479 aa17.41■□□□□ 0.38
PSEN1-207ENST00000553599 DNAJB9Q9UBS3 223 aa17.41■□□□□ 0.38
PSEN1-207ENST00000553599 TESMINQ9Y4I5 508 aa17.41■□□□□ 0.38
PSEN1-207ENST00000553599 FAM208BQ5VWN6 2430 aa17.4■□□□□ 0.38
PSEN1-207ENST00000553599 TRAV36DV7A0A075B6V5 113 aa17.4■□□□□ 0.38
PSEN1-207ENST00000553599 NPIPA2E9PIF3 369 aa17.4■□□□□ 0.38
PSEN1-207ENST00000553599 NPIPA3F8WFD2 350 aa17.4■□□□□ 0.38
PSEN1-207ENST00000553599 DNPH1O43598 174 aa17.4■□□□□ 0.38
PSEN1-207ENST00000553599 MT-ND1P03886 318 aa17.4■□□□□ 0.38
PSEN1-207ENST00000553599 HOXD4P09016 255 aaPredicted RBP17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms