RNA–Protein interactions for RNA: ENST00000552130.6

VPS29-210, Transcript of VPS29, retromer complex component, humanhuman

TSL 1 (best) BASIC

Gene VPS29, Length 1,057 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-210ENST00000552130 CNTN1Q12860 1018 aa5.52□□□□□ -1.53
VPS29-210ENST00000552130 VGLL4Q14135 290 aa5.52□□□□□ -1.53
VPS29-210ENST00000552130 TSC22D1Q15714 1073 aa5.52□□□□□ -1.53
VPS29-210ENST00000552130 ZNF74Q16587 644 aa5.52□□□□□ -1.53
VPS29-210ENST00000552130 C5orf64Q2M2E5 130 aa5.52□□□□□ -1.53
VPS29-210ENST00000552130 MS4A18Q3C1V0 323 aa5.52□□□□□ -1.53
VPS29-210ENST00000552130 LRRC37A5PQ49AS3 106 aa5.52□□□□□ -1.53
VPS29-210ENST00000552130 SLC9C1Q4G0N8 1177 aa5.52□□□□□ -1.53
VPS29-210ENST00000552130 C2CD6Q53TS8 623 aa5.52□□□□□ -1.53
VPS29-210ENST00000552130 ACTBL2Q562R1 376 aa5.52□□□□□ -1.53
VPS29-210ENST00000552130 DMRTC1Q5HYR2 192 aa5.52□□□□□ -1.53
VPS29-210ENST00000552130 EARS2Q5JPH6 523 aaKnown RBP5.52□□□□□ -1.53
VPS29-210ENST00000552130 TCHHL1Q5QJ38 904 aaPredicted RBP5.52□□□□□ -1.53
VPS29-210ENST00000552130 HECTD2Q5U5R9 776 aa5.52□□□□□ -1.53
VPS29-210ENST00000552130 PRMT9Q6P2P2 845 aa5.52□□□□□ -1.53
VPS29-210ENST00000552130 LRRC31Q6UY01 552 aa5.52□□□□□ -1.53
VPS29-210ENST00000552130 MBOAT1Q6ZNC8 495 aa5.52□□□□□ -1.53
VPS29-210ENST00000552130 Q6ZRG5 221 aa5.52□□□□□ -1.53
VPS29-210ENST00000552130 Q71RC1 249 aaPredicted RBP5.52□□□□□ -1.53
VPS29-210ENST00000552130 CTU1Q7Z7A3 348 aaKnown RBP5.52□□□□□ -1.53
VPS29-210ENST00000552130 SETD3Q86TU7 594 aaPredicted RBP5.52□□□□□ -1.53
VPS29-210ENST00000552130 SLC13A5Q86YT5 568 aaPredicted RBP5.52□□□□□ -1.53
VPS29-210ENST00000552130 DHRSXQ8N5I4 330 aa5.52□□□□□ -1.53
VPS29-210ENST00000552130 OR5L2Q8NGL0 311 aa5.52□□□□□ -1.53
VPS29-210ENST00000552130 PLPPR1Q8TBJ4 325 aa5.52□□□□□ -1.53
VPS29-210ENST00000552130 TMEM163Q8TC26 289 aa5.52□□□□□ -1.53
VPS29-210ENST00000552130 MRAPQ8TCY5 172 aa5.52□□□□□ -1.53
VPS29-210ENST00000552130 CD99L2Q8TCZ2 262 aa5.52□□□□□ -1.53
VPS29-210ENST00000552130 TM9SF4Q92544 642 aa5.52□□□□□ -1.53
VPS29-210ENST00000552130 TNFRSF13CQ96RJ3 184 aa5.52□□□□□ -1.53
VPS29-210ENST00000552130 RANBP9Q96S59 729 aa5.52□□□□□ -1.53
VPS29-210ENST00000552130 CNN2Q99439 309 aaKnown RBP5.52□□□□□ -1.53
VPS29-210ENST00000552130 SH3GL3Q99963 347 aa5.52□□□□□ -1.53
VPS29-210ENST00000552130 ECSITQ9BQ95 431 aa5.52□□□□□ -1.53
VPS29-210ENST00000552130 AIFM2Q9BRQ8 373 aa5.52□□□□□ -1.53
VPS29-210ENST00000552130 DCUN1D5Q9BTE7 237 aa5.52□□□□□ -1.53
VPS29-210ENST00000552130 URM1Q9BTM9 101 aaKnown RBP5.52□□□□□ -1.53
VPS29-210ENST00000552130 UCK2Q9BZX2 261 aa5.52□□□□□ -1.53
VPS29-210ENST00000552130 ATP13A3Q9H7F0 1226 aa5.52□□□□□ -1.53
VPS29-210ENST00000552130 SP140LQ9H930 580 aa5.52□□□□□ -1.53
VPS29-210ENST00000552130 S100A14Q9HCY8 104 aa5.52□□□□□ -1.53
VPS29-210ENST00000552130 ABCB10Q9NRK6 738 aa5.52□□□□□ -1.53
VPS29-210ENST00000552130 DCAF13Q9NV06 445 aaKnown RBP5.52□□□□□ -1.53
VPS29-210ENST00000552130 TESQ9UGI8 421 aaKnown RBP5.52□□□□□ -1.53
VPS29-210ENST00000552130 FAF1Q9UNN5 650 aaPredicted RBP5.52□□□□□ -1.53
VPS29-210ENST00000552130 PAM16Q9Y3D7 125 aa5.52□□□□□ -1.53
VPS29-210ENST00000552130 HYOU1Q9Y4L1 999 aa5.52□□□□□ -1.53
VPS29-210ENST00000552130 ALG6Q9Y672 507 aa5.52□□□□□ -1.53
VPS29-210ENST00000552130 COX11Q9Y6N1 276 aa5.52□□□□□ -1.53
VPS29-210ENST00000552130 MYH14Q7Z406 1995 aaKnown RBP5.52□□□□□ -1.53
VPS29-210ENST00000552130 NPIPA5A0A0B4J1W7 369 aa5.51□□□□□ -1.53
VPS29-210ENST00000552130 TEX13DA0A0J9YY54 714 aaPredicted RBP5.51□□□□□ -1.53
VPS29-210ENST00000552130 PROB1E7EW31 1015 aa5.51□□□□□ -1.53
VPS29-210ENST00000552130 NPIPA5E9PKD4 350 aa5.51□□□□□ -1.53
VPS29-210ENST00000552130 F8VP50 259 aa5.51□□□□□ -1.53
VPS29-210ENST00000552130 H0YJX3 145 aa5.51□□□□□ -1.53
VPS29-210ENST00000552130 ZNF195O14628 629 aa5.51□□□□□ -1.53
VPS29-210ENST00000552130 TIMM23O14925 209 aa5.51□□□□□ -1.53
VPS29-210ENST00000552130 SYNGR3O43761 229 aa5.51□□□□□ -1.53
VPS29-210ENST00000552130 TSPAN13O95857 204 aa5.51□□□□□ -1.53
VPS29-210ENST00000552130 F10P00742 488 aa5.51□□□□□ -1.53
VPS29-210ENST00000552130 CRYABP02511 175 aaKnown RBP5.51□□□□□ -1.53
VPS29-210ENST00000552130 MMP1P03956 469 aa5.51□□□□□ -1.53
VPS29-210ENST00000552130 GP1BAP07359 652 aa5.51□□□□□ -1.53
VPS29-210ENST00000552130 NPR2P20594 1047 aa5.51□□□□□ -1.53
VPS29-210ENST00000552130 PRPS1L1P21108 318 aa5.51□□□□□ -1.53
VPS29-210ENST00000552130 HSD11B1P28845 292 aa5.51□□□□□ -1.53
VPS29-210ENST00000552130 GTF2H1P32780 548 aa5.51□□□□□ -1.53
VPS29-210ENST00000552130 IFNA8P32881 189 aa5.51□□□□□ -1.53
VPS29-210ENST00000552130 GPR1P46091 355 aa5.51□□□□□ -1.53
VPS29-210ENST00000552130 HLCSP50747 726 aa5.51□□□□□ -1.53
VPS29-210ENST00000552130 KPNA2P52292 529 aaKnown RBP5.51□□□□□ -1.53
VPS29-210ENST00000552130 RPS18P62269 152 aaKnown RBP5.51□□□□□ -1.53
VPS29-210ENST00000552130 SF3B4Q15427 424 aaKnown RBP eCLIP5.51□□□□□ -1.532e-7■■■■□ 25.8
VPS29-210ENST00000552130 KCTD19Q17RG1 926 aaPredicted RBP5.51□□□□□ -1.53
VPS29-210ENST00000552130 SLC25A52Q3SY17 297 aa5.51□□□□□ -1.53
VPS29-210ENST00000552130 SLC35D3Q5M8T2 416 aa5.51□□□□□ -1.53
VPS29-210ENST00000552130 MARCH8Q5T0T0 291 aa5.51□□□□□ -1.53
VPS29-210ENST00000552130 DDI2Q5TDH0 399 aa5.51□□□□□ -1.53
VPS29-210ENST00000552130 PRAMEF17Q5VTA0 474 aa5.51□□□□□ -1.53
VPS29-210ENST00000552130 BSPRYQ5W0U4 402 aa5.51□□□□□ -1.53
VPS29-210ENST00000552130 KIAA0895LQ68EN5 471 aa5.51□□□□□ -1.53
VPS29-210ENST00000552130 TCEAL6Q6IPX3 200 aa5.51□□□□□ -1.53
VPS29-210ENST00000552130 ACSM5Q6NUN0 579 aa5.51□□□□□ -1.53
VPS29-210ENST00000552130 STEAP1BQ6NZ63 245 aa5.51□□□□□ -1.53
VPS29-210ENST00000552130 RTL4Q6ZR62 310 aa5.51□□□□□ -1.53
VPS29-210ENST00000552130 RFPL4BQ6ZWI9 263 aa5.51□□□□□ -1.53
VPS29-210ENST00000552130 MOB2Q70IA6 237 aa5.51□□□□□ -1.53
VPS29-210ENST00000552130 ZNF677Q86XU0 584 aa5.51□□□□□ -1.53
VPS29-210ENST00000552130 METTL4Q8N3J2 472 aa5.51□□□□□ -1.53
VPS29-210ENST00000552130 SLC44A3Q8N4M1 653 aa5.51□□□□□ -1.53
VPS29-210ENST00000552130 CCNYL1Q8N7R7 359 aa5.51□□□□□ -1.53
VPS29-210ENST00000552130 CDRT4Q8N9R6 151 aa5.51□□□□□ -1.53
VPS29-210ENST00000552130 OR6N2Q8NGY6 317 aa5.51□□□□□ -1.53
VPS29-210ENST00000552130 PIK3R3Q92569 461 aa5.51□□□□□ -1.53
VPS29-210ENST00000552130 MYDGFQ969H8 173 aa5.51□□□□□ -1.53
VPS29-210ENST00000552130 APH1AQ96BI3 265 aa5.51□□□□□ -1.53
VPS29-210ENST00000552130 ZFP3Q96NJ6 502 aa5.51□□□□□ -1.53
VPS29-210ENST00000552130 TAAR1Q96RJ0 339 aa5.51□□□□□ -1.53
VPS29-210ENST00000552130 COMMD4Q9H0A8 199 aa5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms