RNA–Protein interactions for RNA: ENST00000551634.5

NPAS3-211, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS ALT2 TSL 5

Gene NPAS3, Length 2,718 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-211ENST00000551634 SRP54P61011 504 aaKnown RBP21.79■■□□□ 1.08
NPAS3-211ENST00000551634 FAM69AQ5T7M9 428 aa21.79■■□□□ 1.08
NPAS3-211ENST00000551634 OR51Q1Q8NH59 317 aa21.79■■□□□ 1.08
NPAS3-211ENST00000551634 MAP6Q96JE9 813 aa21.79■■□□□ 1.08
NPAS3-211ENST00000551634 OR2A5Q96R48 311 aa21.79■■□□□ 1.08
NPAS3-211ENST00000551634 APOOQ9BUR5 198 aa21.79■■□□□ 1.08
NPAS3-211ENST00000551634 MAT2BQ9NZL9 334 aa21.79■■□□□ 1.08
NPAS3-211ENST00000551634 AKAP7Q9P0M2 348 aaPredicted RBP21.79■■□□□ 1.08
NPAS3-211ENST00000551634 NPIPA5A0A0B4J1W7 369 aa21.79■■□□□ 1.08
NPAS3-211ENST00000551634 NPIPA7E9PJI5 369 aa21.79■■□□□ 1.08
NPAS3-211ENST00000551634 ZNF593O00488 134 aaPredicted RBP21.79■■□□□ 1.08
NPAS3-211ENST00000551634 NPIPA8P0DM63 369 aa21.79■■□□□ 1.08
NPAS3-211ENST00000551634 DRD5P21918 477 aa21.79■■□□□ 1.08
NPAS3-211ENST00000551634 IGFALSP35858 605 aa21.79■■□□□ 1.08
NPAS3-211ENST00000551634 MAP3K8P41279 467 aa21.79■■□□□ 1.08
NPAS3-211ENST00000551634 LGALSLQ3ZCW2 172 aaPredicted RBP21.79■■□□□ 1.08
NPAS3-211ENST00000551634 GPR139Q6DWJ6 353 aa21.79■■□□□ 1.08
NPAS3-211ENST00000551634 RPL22L1Q6P5R6 122 aaKnown RBP21.79■■□□□ 1.08
NPAS3-211ENST00000551634 SLITRK4Q8IW52 837 aa21.79■■□□□ 1.08
NPAS3-211ENST00000551634 ZCCHC10Q8TBK6 192 aa21.79■■□□□ 1.08
NPAS3-211ENST00000551634 SMAP2Q8WU79 429 aaPredicted RBP21.79■■□□□ 1.08
NPAS3-211ENST00000551634 NXPE2Q96DL1 559 aa21.79■■□□□ 1.08
NPAS3-211ENST00000551634 PELI1Q96FA3 418 aa21.79■■□□□ 1.08
NPAS3-211ENST00000551634 TNFRSF13CQ96RJ3 184 aa21.79■■□□□ 1.08
NPAS3-211ENST00000551634 ZNF426Q9BUY5 554 aa21.79■■□□□ 1.08
NPAS3-211ENST00000551634 SLC17A9Q9BYT1 436 aa21.79■■□□□ 1.08
NPAS3-211ENST00000551634 BRINP1O60477 761 aa21.79■■□□□ 1.08
NPAS3-211ENST00000551634 PDGFAP04085 211 aa21.79■■□□□ 1.08
NPAS3-211ENST00000551634 SIRPAP78324 504 aa21.79■■□□□ 1.08
NPAS3-211ENST00000551634 SNTA1Q13424 505 aa21.79■■□□□ 1.08
NPAS3-211ENST00000551634 TP53I3Q53FA7 332 aa21.79■■□□□ 1.08
NPAS3-211ENST00000551634 RNASE12Q5GAN4 147 aaKnown RBP21.79■■□□□ 1.08
NPAS3-211ENST00000551634 UBE2NLQ5JXB2 153 aa21.79■■□□□ 1.08
NPAS3-211ENST00000551634 LYRM4Q9HD34 91 aa21.79■■□□□ 1.08
NPAS3-211ENST00000551634 KCNN3Q9UGI6 736 aa21.79■■□□□ 1.08
NPAS3-211ENST00000551634 PCDHGA9Q9Y5G4 932 aaKnown RBP21.79■■□□□ 1.08
NPAS3-211ENST00000551634 PRAF2O60831 178 aa21.78■■□□□ 1.08
NPAS3-211ENST00000551634 TMEM127O75204 238 aa21.78■■□□□ 1.08
NPAS3-211ENST00000551634 GYPBP06028 91 aa21.78■■□□□ 1.08
NPAS3-211ENST00000551634 ANKRD34CP0C6C1 535 aa21.78■■□□□ 1.08
NPAS3-211ENST00000551634 WASP42768 502 aa21.78■■□□□ 1.08
NPAS3-211ENST00000551634 EPHA4P54764 986 aa21.78■■□□□ 1.08
NPAS3-211ENST00000551634 POU6F2P78424 691 aaPredicted RBP21.78■■□□□ 1.08
NPAS3-211ENST00000551634 ENPP2Q13822 863 aa21.78■■□□□ 1.08
NPAS3-211ENST00000551634 GGTLC2Q14390 218 aa21.78■■□□□ 1.08
NPAS3-211ENST00000551634 CDONQ4KMG0 1287 aa21.78■■□□□ 1.08
NPAS3-211ENST00000551634 C2orf27AQ580R0 203 aa21.78■■□□□ 1.08
NPAS3-211ENST00000551634 CLLU1Q5K131 121 aa21.78■■□□□ 1.08
NPAS3-211ENST00000551634 C1QTNF7Q9BXJ2 289 aa21.78■■□□□ 1.08
NPAS3-211ENST00000551634 PLEKHA1Q9HB21 404 aa21.78■■□□□ 1.08
NPAS3-211ENST00000551634 NRIP3Q9NQ35 241 aa21.78■■□□□ 1.08
NPAS3-211ENST00000551634 OBP2AQ9NY56 170 aa21.78■■□□□ 1.08
NPAS3-211ENST00000551634 NUP50Q9UKX7 468 aa21.78■■□□□ 1.08
NPAS3-211ENST00000551634 ICAM5Q9UMF0 924 aa21.78■■□□□ 1.08
NPAS3-211ENST00000551634 SSNA1O43805 119 aa21.78■■□□□ 1.08
NPAS3-211ENST00000551634 PEX14O75381 377 aa21.78■■□□□ 1.08
NPAS3-211ENST00000551634 WNT1P04628 370 aa21.78■■□□□ 1.08
NPAS3-211ENST00000551634 GJA4P35212 333 aa21.78■■□□□ 1.08
NPAS3-211ENST00000551634 UNQ9370/PRO34162Q6UXP9 181 aa21.78■■□□□ 1.08
NPAS3-211ENST00000551634 PIAS4Q8N2W9 510 aaPredicted RBP21.78■■□□□ 1.08
NPAS3-211ENST00000551634 ZNF527Q8NB42 609 aa21.78■■□□□ 1.08
NPAS3-211ENST00000551634 MCCC2Q9HCC0 563 aa21.78■■□□□ 1.08
NPAS3-211ENST00000551634 COL6A3P12111 3177 aa21.77■■□□□ 1.08
NPAS3-211ENST00000551634 A0A0B4J203 849 aa21.77■■□□□ 1.08
NPAS3-211ENST00000551634 NARSO43776 548 aaKnown RBP21.77■■□□□ 1.08
NPAS3-211ENST00000551634 TFP02787 698 aa21.77■■□□□ 1.08
NPAS3-211ENST00000551634 MT-ND4P03905 459 aa21.77■■□□□ 1.08
NPAS3-211ENST00000551634 GDNFP39905 211 aa21.77■■□□□ 1.08
NPAS3-211ENST00000551634 RPS11P62280 158 aaKnown RBP eCLIP21.77■■□□□ 1.08
NPAS3-211ENST00000551634 PLAURQ03405 335 aa21.77■■□□□ 1.08
NPAS3-211ENST00000551634 WDR45BQ5MNZ6 344 aa21.77■■□□□ 1.08
NPAS3-211ENST00000551634 UBE2Q1Q7Z7E8 422 aa21.77■■□□□ 1.08
NPAS3-211ENST00000551634 ZNF671Q8TAW3 534 aa21.77■■□□□ 1.08
NPAS3-211ENST00000551634 CNN2Q99439 309 aaKnown RBP21.77■■□□□ 1.08
NPAS3-211ENST00000551634 USP36Q9P275 1121 aaKnown RBP21.77■■□□□ 1.08
NPAS3-211ENST00000551634 TNFSF14O43557 240 aa21.77■■□□□ 1.07
NPAS3-211ENST00000551634 KIR2DS3Q14952 304 aa21.77■■□□□ 1.07
NPAS3-211ENST00000551634 FIGNL1Q6PIW4 674 aa21.77■■□□□ 1.07
NPAS3-211ENST00000551634 ABHD13Q7L211 337 aa21.77■■□□□ 1.07
NPAS3-211ENST00000551634 HDDC2Q7Z4H3 204 aa21.77■■□□□ 1.07
NPAS3-211ENST00000551634 GRHL3Q8TE85 626 aa21.77■■□□□ 1.07
NPAS3-211ENST00000551634 OR2M4Q96R27 311 aa21.77■■□□□ 1.07
NPAS3-211ENST00000551634 MYADMQ96S97 322 aa21.77■■□□□ 1.07
NPAS3-211ENST00000551634 C20orf85Q9H1P6 137 aa21.77■■□□□ 1.07
NPAS3-211ENST00000551634 SRMSQ9H3Y6 488 aa21.77■■□□□ 1.07
NPAS3-211ENST00000551634 A0A1W2PQU0 124 aa21.76■■□□□ 1.07
NPAS3-211ENST00000551634 LRRC72A6NJI9 287 aa21.76■■□□□ 1.07
NPAS3-211ENST00000551634 ZNF879B4DU55 563 aa21.76■■□□□ 1.07
NPAS3-211ENST00000551634 P2RX6O15547 441 aa21.76■■□□□ 1.07
NPAS3-211ENST00000551634 GPRIN2O60269 458 aa21.76■■□□□ 1.07
NPAS3-211ENST00000551634 ZNF81P51508 661 aa21.76■■□□□ 1.07
NPAS3-211ENST00000551634 FHL1Q13642 323 aa21.76■■□□□ 1.07
NPAS3-211ENST00000551634 FGFBP1Q14512 234 aa21.76■■□□□ 1.07
NPAS3-211ENST00000551634 GRK1Q15835 563 aa21.76■■□□□ 1.07
NPAS3-211ENST00000551634 PSRC1Q6PGN9 363 aaPredicted RBP21.76■■□□□ 1.07
NPAS3-211ENST00000551634 GRAMD2AQ8IUY3 354 aa21.76■■□□□ 1.07
NPAS3-211ENST00000551634 CAMKVQ8NCB2 501 aa21.76■■□□□ 1.07
NPAS3-211ENST00000551634 DACT3Q96B18 629 aaPredicted RBP21.76■■□□□ 1.07
NPAS3-211ENST00000551634 MRPL48Q96GC5 212 aaKnown RBP21.76■■□□□ 1.07
NPAS3-211ENST00000551634 TBC1D29Q9UFV1 150 aa21.76■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms