RNA–Protein interactions for RNA: ENST00000551516.1

CPSF6-207, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 2 BASIC

Gene CPSF6, Length 234 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-207ENST00000551516 TMEM219Q86XT9 240 aa2.1□□□□□ -2.07
CPSF6-207ENST00000551516 CDC20BQ86Y33 519 aa2.1□□□□□ -2.07
CPSF6-207ENST00000551516 PTOV1Q86YD1 416 aa2.1□□□□□ -2.07
CPSF6-207ENST00000551516 CREBRFQ8IUR6 639 aa2.1□□□□□ -2.07
CPSF6-207ENST00000551516 DCUN1D3Q8IWE4 304 aa2.1□□□□□ -2.07
CPSF6-207ENST00000551516 ODF3L1Q8IXM7 274 aa2.1□□□□□ -2.07
CPSF6-207ENST00000551516 KLHDC8AQ8IYD2 350 aa2.1□□□□□ -2.07
CPSF6-207ENST00000551516 KRT222Q8N1A0 295 aa2.1□□□□□ -2.07
CPSF6-207ENST00000551516 MUC20Q8N307 709 aaPredicted RBP2.1□□□□□ -2.07
CPSF6-207ENST00000551516 LRRC25Q8N386 305 aaPredicted RBP2.1□□□□□ -2.07
CPSF6-207ENST00000551516 C2orf73Q8N5S3 287 aaPredicted RBP2.1□□□□□ -2.07
CPSF6-207ENST00000551516 METTL27Q8N6F8 245 aaPredicted RBP2.1□□□□□ -2.07
CPSF6-207ENST00000551516 TMCO5AQ8N6Q1 288 aa2.1□□□□□ -2.07
CPSF6-207ENST00000551516 ZNF611Q8N823 705 aa2.1□□□□□ -2.07
CPSF6-207ENST00000551516 ZNF321PQ8N8H1 164 aa2.1□□□□□ -2.07
CPSF6-207ENST00000551516 ZNF441Q8N8Z8 693 aa2.1□□□□□ -2.07
CPSF6-207ENST00000551516 CCNYQ8ND76 341 aa2.1□□□□□ -2.07
CPSF6-207ENST00000551516 ZNF740Q8NDX6 193 aa2.1□□□□□ -2.07
CPSF6-207ENST00000551516 IPMKQ8NFU5 416 aa2.1□□□□□ -2.07
CPSF6-207ENST00000551516 OR5T3Q8NGG3 340 aa2.1□□□□□ -2.07
CPSF6-207ENST00000551516 OR9A4Q8NGU2 314 aa2.1□□□□□ -2.07
CPSF6-207ENST00000551516 B4GALNT2Q8NHY0 566 aa2.1□□□□□ -2.07
CPSF6-207ENST00000551516 BLOC1S5Q8TDH9 187 aa2.1□□□□□ -2.07
CPSF6-207ENST00000551516 HEXDCQ8WVB3 486 aa2.1□□□□□ -2.07
CPSF6-207ENST00000551516 NEUROG1Q92886 237 aa2.1□□□□□ -2.07
CPSF6-207ENST00000551516 DAZLQ92904 295 aaKnown RBP2.1□□□□□ -2.07
CPSF6-207ENST00000551516 EXT2Q93063 718 aa2.1□□□□□ -2.07
CPSF6-207ENST00000551516 MOB3AQ96BX8 217 aa2.1□□□□□ -2.07
CPSF6-207ENST00000551516 ULK4Q96C45 1275 aa2.1□□□□□ -2.07
CPSF6-207ENST00000551516 RBM41Q96IZ5 413 aaKnown RBP2.1□□□□□ -2.07
CPSF6-207ENST00000551516 ZNF582Q96NG8 517 aaPredicted RBP2.1□□□□□ -2.07
CPSF6-207ENST00000551516 PKP4Q99569 1192 aa2.1□□□□□ -2.07
CPSF6-207ENST00000551516 BTBD10Q9BSF8 475 aa2.1□□□□□ -2.07
CPSF6-207ENST00000551516 DPH7Q9BTV6 452 aa2.1□□□□□ -2.07
CPSF6-207ENST00000551516 KIFC1Q9BW19 673 aa2.1□□□□□ -2.07
CPSF6-207ENST00000551516 ZNF717Q9BY31 904 aaPredicted RBP2.1□□□□□ -2.07
CPSF6-207ENST00000551516 SLA2Q9H6Q3 261 aa2.1□□□□□ -2.07
CPSF6-207ENST00000551516 XAB2Q9HCS7 855 aaKnown RBP2.1□□□□□ -2.07
CPSF6-207ENST00000551516 CHRAC1Q9NRG0 131 aa2.1□□□□□ -2.07
CPSF6-207ENST00000551516 PNPLA3Q9NST1 481 aa2.1□□□□□ -2.07
CPSF6-207ENST00000551516 C14orf105Q9NVL8 296 aa2.1□□□□□ -2.07
CPSF6-207ENST00000551516 SOHLH2Q9NX45 425 aa2.1□□□□□ -2.07
CPSF6-207ENST00000551516 SPRR3Q9UBC9 169 aa2.1□□□□□ -2.07
CPSF6-207ENST00000551516 CIDEBQ9UHD4 219 aa2.1□□□□□ -2.07
CPSF6-207ENST00000551516 NPIPA1Q9UND3 350 aa2.1□□□□□ -2.07
CPSF6-207ENST00000551516 ASF1AQ9Y294 204 aa2.1□□□□□ -2.07
CPSF6-207ENST00000551516 SPIN1Q9Y657 262 aaPredicted RBP2.1□□□□□ -2.07
CPSF6-207ENST00000551516 SLC22A7Q9Y694 548 aa2.1□□□□□ -2.07
CPSF6-207ENST00000551516 POMT1Q9Y6A1 747 aa2.1□□□□□ -2.07
CPSF6-207ENST00000551516 IKBKGQ9Y6K9 419 aa2.1□□□□□ -2.07
CPSF6-207ENST00000551516 HCFC1P51610 2035 aa2.1□□□□□ -2.07
CPSF6-207ENST00000551516 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP2.09□□□□□ -2.072e-7■■■■□ 22.4
CPSF6-207ENST00000551516 MED12Q93074 2177 aa2.09□□□□□ -2.07
CPSF6-207ENST00000551516 CMYA5Q8N3K9 4069 aa2.09□□□□□ -2.07
CPSF6-207ENST00000551516 TNFSF12-TNFSF13A0A0A6YY99 330 aa2.09□□□□□ -2.07
CPSF6-207ENST00000551516 NSG1A0A0A6YYJ2 146 aa2.09□□□□□ -2.07
CPSF6-207ENST00000551516 A0A1W2PPM1 405 aa2.09□□□□□ -2.07
CPSF6-207ENST00000551516 A0A1W2PPQ1 181 aa2.09□□□□□ -2.07
CPSF6-207ENST00000551516 HTR3EA5X5Y0 456 aa2.09□□□□□ -2.07
CPSF6-207ENST00000551516 GOLGA6L4A6NEF3 574 aa2.09□□□□□ -2.07
CPSF6-207ENST00000551516 C2orf81A6NN90 581 aa2.09□□□□□ -2.07
CPSF6-207ENST00000551516 GABRR3A8MPY1 467 aa2.09□□□□□ -2.07
CPSF6-207ENST00000551516 PRR32B1ATL7 298 aa2.09□□□□□ -2.07
CPSF6-207ENST00000551516 ZNF587BE7ETH6 402 aa2.09□□□□□ -2.07
CPSF6-207ENST00000551516 OVOL3O00110 214 aa2.09□□□□□ -2.07
CPSF6-207ENST00000551516 PRMT5O14744 637 aaPredicted RBP2.09□□□□□ -2.07
CPSF6-207ENST00000551516 TRIM3O75382 744 aaPredicted RBP2.09□□□□□ -2.07
CPSF6-207ENST00000551516 TNFSF13O75888 250 aa2.09□□□□□ -2.07
CPSF6-207ENST00000551516 ANXA9O76027 345 aa2.09□□□□□ -2.07
CPSF6-207ENST00000551516 PDE9AO76083 593 aa2.09□□□□□ -2.07
CPSF6-207ENST00000551516 ALPLP05186 524 aa2.09□□□□□ -2.07
CPSF6-207ENST00000551516 LIPFP07098 398 aa2.09□□□□□ -2.07
CPSF6-207ENST00000551516 NGFRP08138 427 aa2.09□□□□□ -2.07
CPSF6-207ENST00000551516 VIMP08670 466 aaKnown RBP2.09□□□□□ -2.07
CPSF6-207ENST00000551516 ZSCAN5DPP0CG00 497 aa2.09□□□□□ -2.07
CPSF6-207ENST00000551516 T-ENOLP0DO92 83 aa2.09□□□□□ -2.07
CPSF6-207ENST00000551516 CDH1P12830 882 aa2.09□□□□□ -2.07
CPSF6-207ENST00000551516 ETS1P14921 441 aa2.09□□□□□ -2.07
CPSF6-207ENST00000551516 ITGA2P17301 1181 aa2.09□□□□□ -2.07
CPSF6-207ENST00000551516 CD22P20273 847 aa2.09□□□□□ -2.07
CPSF6-207ENST00000551516 MSNP26038 577 aaKnown RBP2.09□□□□□ -2.07
CPSF6-207ENST00000551516 CTNNA2P26232 953 aa2.09□□□□□ -2.07
CPSF6-207ENST00000551516 IVDP26440 423 aa2.09□□□□□ -2.07
CPSF6-207ENST00000551516 CHRNB4P30926 498 aa2.09□□□□□ -2.07
CPSF6-207ENST00000551516 SLC6A6P31641 620 aa2.09□□□□□ -2.07
CPSF6-207ENST00000551516 BDKRB1P46663 353 aa2.09□□□□□ -2.07
CPSF6-207ENST00000551516 SLCO1A2P46721 670 aa2.09□□□□□ -2.07
CPSF6-207ENST00000551516 HLCSP50747 726 aa2.09□□□□□ -2.07
CPSF6-207ENST00000551516 MAPK12P53778 367 aa2.09□□□□□ -2.07
CPSF6-207ENST00000551516 GEMP55040 296 aa2.09□□□□□ -2.07
CPSF6-207ENST00000551516 TPD52P55327 224 aaPredicted RBP2.09□□□□□ -2.07
CPSF6-207ENST00000551516 DSCR9P59020 149 aa2.09□□□□□ -2.07
CPSF6-207ENST00000551516 DYNLT1P63172 113 aa2.09□□□□□ -2.07
CPSF6-207ENST00000551516 ARG2P78540 354 aa2.09□□□□□ -2.07
CPSF6-207ENST00000551516 PTK6Q13882 451 aa2.09□□□□□ -2.07
CPSF6-207ENST00000551516 KRT81Q14533 505 aa2.09□□□□□ -2.07
CPSF6-207ENST00000551516 RBBP7Q16576 425 aa2.09□□□□□ -2.07
CPSF6-207ENST00000551516 STX1AQ16623 288 aa2.09□□□□□ -2.07
CPSF6-207ENST00000551516 PHKG1Q16816 387 aa2.09□□□□□ -2.07
CPSF6-207ENST00000551516 HADHQ16836 314 aaKnown RBP2.09□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms