RNA–Protein interactions for RNA: ENST00000551008.5

NPAS3-209, Transcript of neuronal PAS domain protein 3, humanhuman

TSL 1 (best) BASIC

Gene NPAS3, Length 1,002 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-209ENST00000551008 OSGIN1Q9UJX0 560 aa11.55□□□□□ -0.56
NPAS3-209ENST00000551008 GPR52Q9Y2T5 361 aa11.55□□□□□ -0.56
NPAS3-209ENST00000551008 IGKV3D-15A0A087WSY6 115 aa11.54□□□□□ -0.56
NPAS3-209ENST00000551008 TRBV5-3A0A0A0MS03 114 aa11.54□□□□□ -0.56
NPAS3-209ENST00000551008 TMEM72A0PK05 275 aa11.54□□□□□ -0.56
NPAS3-209ENST00000551008 FAM234BA2RU67 622 aa11.54□□□□□ -0.56
NPAS3-209ENST00000551008 CDHR4A6H8M9 788 aa11.54□□□□□ -0.56
NPAS3-209ENST00000551008 FAAHO00519 579 aa11.54□□□□□ -0.56
NPAS3-209ENST00000551008 BCHEP06276 602 aa11.54□□□□□ -0.56
NPAS3-209ENST00000551008 PABPC4LP0CB38 370 aaKnown RBP11.54□□□□□ -0.56
NPAS3-209ENST00000551008 NR2F1P10589 423 aa11.54□□□□□ -0.56
NPAS3-209ENST00000551008 IMPDH2P12268 514 aa11.54□□□□□ -0.56
NPAS3-209ENST00000551008 BMP2P12643 396 aa11.54□□□□□ -0.56
NPAS3-209ENST00000551008 PRG2P13727 222 aa11.54□□□□□ -0.56
NPAS3-209ENST00000551008 CD99P14209 185 aa11.54□□□□□ -0.56
NPAS3-209ENST00000551008 H2AFXP16104 143 aaPredicted RBP11.54□□□□□ -0.56
NPAS3-209ENST00000551008 PPP3CBP16298 524 aa11.54□□□□□ -0.56
NPAS3-209ENST00000551008 APOBEC1P41238 236 aaKnown RBP11.54□□□□□ -0.56
NPAS3-209ENST00000551008 ACAA2P42765 397 aaKnown RBP11.54□□□□□ -0.56
NPAS3-209ENST00000551008 DSTNP60981 165 aa11.54□□□□□ -0.56
NPAS3-209ENST00000551008 TXNL4AP83876 142 aaKnown RBP11.54□□□□□ -0.56
NPAS3-209ENST00000551008 HPCAP84074 193 aa11.54□□□□□ -0.56
NPAS3-209ENST00000551008 H3F3AP84243 136 aa11.54□□□□□ -0.56
NPAS3-209ENST00000551008 RASGEF1BQ0VAM2 473 aa11.54□□□□□ -0.56
NPAS3-209ENST00000551008 TMEM201Q5SNT2 666 aa11.54□□□□□ -0.56
NPAS3-209ENST00000551008 SFRP5Q5T4F7 317 aa11.54□□□□□ -0.56
NPAS3-209ENST00000551008 GTF2IRD2BQ6EKJ0 949 aa11.54□□□□□ -0.56
NPAS3-209ENST00000551008 GTF2IRD2Q86UP8 949 aa11.54□□□□□ -0.56
NPAS3-209ENST00000551008 COMTD1Q86VU5 262 aa11.54□□□□□ -0.56
NPAS3-209ENST00000551008 MIER2Q8N344 545 aa11.54□□□□□ -0.56
NPAS3-209ENST00000551008 CLIP4Q8N3C7 705 aa11.54□□□□□ -0.56
NPAS3-209ENST00000551008 ARFGAP2Q8N6H7 521 aa11.54□□□□□ -0.56
NPAS3-209ENST00000551008 LILRB1Q8NHL6 650 aaPredicted RBP11.54□□□□□ -0.56
NPAS3-209ENST00000551008 SLC25A43Q8WUT9 341 aaPredicted RBP11.54□□□□□ -0.56
NPAS3-209ENST00000551008 ITCHQ96J02 903 aa11.54□□□□□ -0.56
NPAS3-209ENST00000551008 MTHFD2LQ9H903 347 aaPredicted RBP11.54□□□□□ -0.56
NPAS3-209ENST00000551008 TCF7L2Q9NQB0 619 aa11.54□□□□□ -0.56
NPAS3-209ENST00000551008 SLAMF8Q9P0V8 285 aa11.54□□□□□ -0.56
NPAS3-209ENST00000551008 KLHL9Q9P2J3 617 aa11.54□□□□□ -0.56
NPAS3-209ENST00000551008 PCDHB14Q9Y5E9 798 aa11.54□□□□□ -0.56
NPAS3-209ENST00000551008 NIPBLQ6KC79 2804 aaeCLIP11.53□□□□□ -0.56
NPAS3-209ENST00000551008 TMED7-TICAM2A0A0A6YYA0 188 aa11.53□□□□□ -0.56
NPAS3-209ENST00000551008 ZNF724A8MTY0 619 aa11.53□□□□□ -0.56
NPAS3-209ENST00000551008 SULT2B1O00204 365 aa11.53□□□□□ -0.56
NPAS3-209ENST00000551008 KRT75O95678 551 aa11.53□□□□□ -0.56
NPAS3-209ENST00000551008 PMS2P2O95744 297 aa11.53□□□□□ -0.56
NPAS3-209ENST00000551008 DBIP07108 87 aaKnown RBP11.53□□□□□ -0.56
NPAS3-209ENST00000551008 GKN3PP0CG01 181 aa11.53□□□□□ -0.56
NPAS3-209ENST00000551008 HOXB1P14653 301 aaPredicted RBP11.53□□□□□ -0.56
NPAS3-209ENST00000551008 CCNA2P20248 432 aa11.53□□□□□ -0.56
NPAS3-209ENST00000551008 COX5AP20674 150 aa11.53□□□□□ -0.56
NPAS3-209ENST00000551008 MAGEA8P43361 318 aa11.53□□□□□ -0.56
NPAS3-209ENST00000551008 FOXG1P55316 489 aaPredicted RBP11.53□□□□□ -0.56
NPAS3-209ENST00000551008 TAB1Q15750 504 aa11.53□□□□□ -0.56
NPAS3-209ENST00000551008 ACKR1Q16570 336 aa11.53□□□□□ -0.56
NPAS3-209ENST00000551008 BEX5Q5H9J7 111 aa11.53□□□□□ -0.56
NPAS3-209ENST00000551008 PAGE3Q5JUK9 113 aa11.53□□□□□ -0.56
NPAS3-209ENST00000551008 LRIF1Q5T3J3 769 aa11.53□□□□□ -0.56
NPAS3-209ENST00000551008 BLOC1S3Q6QNY0 202 aa11.53□□□□□ -0.56
NPAS3-209ENST00000551008 MTDHQ86UE4 582 aaKnown RBP11.53□□□□□ -0.56
NPAS3-209ENST00000551008 STK32CQ86UX6 486 aa11.53□□□□□ -0.56
NPAS3-209ENST00000551008 WFDC8Q8IUA0 241 aa11.53□□□□□ -0.56
NPAS3-209ENST00000551008 CCDC103Q8IW40 242 aa11.53□□□□□ -0.56
NPAS3-209ENST00000551008 ZNF563Q8TA94 476 aa11.53□□□□□ -0.56
NPAS3-209ENST00000551008 PLPPR2Q96GM1 343 aa11.53□□□□□ -0.56
NPAS3-209ENST00000551008 TMEM19Q96HH6 336 aa11.53□□□□□ -0.56
NPAS3-209ENST00000551008 REXO5Q96IC2 774 aaKnown RBP11.53□□□□□ -0.56
NPAS3-209ENST00000551008 ADAM19Q9H013 955 aa11.53□□□□□ -0.56
NPAS3-209ENST00000551008 IKZF5Q9H5V7 419 aa11.53□□□□□ -0.56
NPAS3-209ENST00000551008 UBTD1Q9HAC8 227 aa11.53□□□□□ -0.56
NPAS3-209ENST00000551008 BEX4Q9NWD9 120 aaPredicted RBP11.53□□□□□ -0.56
NPAS3-209ENST00000551008 P2RX2Q9UBL9 471 aa11.53□□□□□ -0.56
NPAS3-209ENST00000551008 ZNF443Q9Y2A4 671 aaPredicted RBP11.53□□□□□ -0.56
NPAS3-209ENST00000551008 TMED7Q9Y3B3 224 aa11.53□□□□□ -0.56
NPAS3-209ENST00000551008 FN1P02751 2386 aaKnown RBP11.53□□□□□ -0.56
NPAS3-209ENST00000551008 HEATR1Q9H583 2144 aaKnown RBP11.53□□□□□ -0.56
NPAS3-209ENST00000551008 ALPK2Q86TB3 2170 aa11.52□□□□□ -0.56
NPAS3-209ENST00000551008 SASH3O75995 380 aa11.52□□□□□ -0.57
NPAS3-209ENST00000551008 TGDSO95455 350 aa11.52□□□□□ -0.57
NPAS3-209ENST00000551008 ADAP00813 363 aa11.52□□□□□ -0.57
NPAS3-209ENST00000551008 TFPIP10646 304 aa11.52□□□□□ -0.57
NPAS3-209ENST00000551008 IGHV1-2P23083 117 aa11.52□□□□□ -0.57
NPAS3-209ENST00000551008 TACR3P29371 465 aa11.52□□□□□ -0.57
NPAS3-209ENST00000551008 CRATP43155 626 aa11.52□□□□□ -0.57
NPAS3-209ENST00000551008 ANXA11P50995 505 aaKnown RBP11.52□□□□□ -0.57
NPAS3-209ENST00000551008 SLC16A1P53985 500 aa11.52□□□□□ -0.57
NPAS3-209ENST00000551008 PDK3Q15120 406 aa11.52□□□□□ -0.57
NPAS3-209ENST00000551008 RGNQ15493 299 aa11.52□□□□□ -0.57
NPAS3-209ENST00000551008 C6orf10Q5SRN2 563 aa11.52□□□□□ -0.57
NPAS3-209ENST00000551008 LCE2DQ5TA82 110 aaPredicted RBP11.52□□□□□ -0.57
NPAS3-209ENST00000551008 RNF220Q5VTB9 566 aa11.52□□□□□ -0.57
NPAS3-209ENST00000551008 ZNF704Q6ZNC4 412 aaPredicted RBP11.52□□□□□ -0.57
NPAS3-209ENST00000551008 Q6ZT83 130 aa11.52□□□□□ -0.57
NPAS3-209ENST00000551008 OR52P1PQ8NH57 321 aa11.52□□□□□ -0.57
NPAS3-209ENST00000551008 LRRC8CQ8TDW0 803 aa11.52□□□□□ -0.57
NPAS3-209ENST00000551008 PMM1Q92871 262 aa11.52□□□□□ -0.57
NPAS3-209ENST00000551008 MAL2Q969L2 176 aa11.52□□□□□ -0.57
NPAS3-209ENST00000551008 PIP5K1AQ99755 562 aa11.52□□□□□ -0.57
NPAS3-209ENST00000551008 TACO1Q9BSH4 297 aaKnown RBP11.52□□□□□ -0.57
NPAS3-209ENST00000551008 CCDC28BQ9BUN5 200 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms