RNA–Protein interactions for RNA: ENST00000550914.6

PTCH1-221, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 630 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-221ENST00000550914 DEPDC4Q8N2C3 294 aa11.32□□□□□ -0.6
PTCH1-221ENST00000550914 UBE2J2Q8N2K1 259 aa11.32□□□□□ -0.6
PTCH1-221ENST00000550914 ELOA3Q8NG57 546 aa11.32□□□□□ -0.6
PTCH1-221ENST00000550914 OR2W6PQ8NHA6 318 aa11.32□□□□□ -0.6
PTCH1-221ENST00000550914 AGR3Q8TD06 166 aa11.32□□□□□ -0.6
PTCH1-221ENST00000550914 TUBGCP3Q96CW5 907 aa11.32□□□□□ -0.6
PTCH1-221ENST00000550914 SLC35G5Q96KT7 338 aa11.32□□□□□ -0.6
PTCH1-221ENST00000550914 TNFRSF13CQ96RJ3 184 aa11.32□□□□□ -0.6
PTCH1-221ENST00000550914 MECRQ9BV79 373 aa11.32□□□□□ -0.6
PTCH1-221ENST00000550914 CCDC106Q9BWC9 280 aa11.32□□□□□ -0.6
PTCH1-221ENST00000550914 CACNG6Q9BXT2 260 aa11.32□□□□□ -0.6
PTCH1-221ENST00000550914 SAP130Q9H0E3 1048 aa11.32□□□□□ -0.6
PTCH1-221ENST00000550914 ASB6Q9NWX5 421 aa11.32□□□□□ -0.6
PTCH1-221ENST00000550914 TAS2R16Q9NYV7 291 aa11.32□□□□□ -0.6
PTCH1-221ENST00000550914 CHRNA9Q9UGM1 479 aa11.32□□□□□ -0.6
PTCH1-221ENST00000550914 MKLN1Q9UL63 735 aa11.32□□□□□ -0.6
PTCH1-221ENST00000550914 NOSIPQ9Y314 301 aaKnown RBP11.32□□□□□ -0.6
PTCH1-221ENST00000550914 SLC25A15Q9Y619 301 aa11.32□□□□□ -0.6
PTCH1-221ENST00000550914 CENPVL1A0A0U1RR11 272 aa11.31□□□□□ -0.6
PTCH1-221ENST00000550914 RNF103-CHMP3A0A140T963 221 aa11.31□□□□□ -0.6
PTCH1-221ENST00000550914 CIB4A0PJX0 185 aa11.31□□□□□ -0.6
PTCH1-221ENST00000550914 CCT8L1PA6NM43 557 aa11.31□□□□□ -0.6
PTCH1-221ENST00000550914 RAD51DO75771 328 aa11.31□□□□□ -0.6
PTCH1-221ENST00000550914 NUDT17P0C025 328 aa11.31□□□□□ -0.6
PTCH1-221ENST00000550914 FAM157CP0CG43 387 aa11.31□□□□□ -0.6
PTCH1-221ENST00000550914 TFPIP10646 304 aa11.31□□□□□ -0.6
PTCH1-221ENST00000550914 G6PDP11413 515 aa11.31□□□□□ -0.6
PTCH1-221ENST00000550914 CD40P25942 277 aa11.31□□□□□ -0.6
PTCH1-221ENST00000550914 EMX2Q04743 252 aa11.31□□□□□ -0.6
PTCH1-221ENST00000550914 RAB35Q15286 201 aa11.31□□□□□ -0.6
PTCH1-221ENST00000550914 TMEM249Q2WGJ8 235 aa11.31□□□□□ -0.6
PTCH1-221ENST00000550914 ATAD3BQ5T9A4 648 aa11.31□□□□□ -0.6
PTCH1-221ENST00000550914 SLC22A25Q6T423 547 aa11.31□□□□□ -0.6
PTCH1-221ENST00000550914 GRINAQ7Z429 371 aa11.31□□□□□ -0.6
PTCH1-221ENST00000550914 PHC2Q8IXK0 858 aa11.31□□□□□ -0.6
PTCH1-221ENST00000550914 FBXL14Q8N1E6 418 aa11.31□□□□□ -0.6
PTCH1-221ENST00000550914 MUC15Q8N387 334 aa11.31□□□□□ -0.6
PTCH1-221ENST00000550914 OR8J2Q8NGG1 315 aa11.31□□□□□ -0.6
PTCH1-221ENST00000550914 MUS81Q96NY9 551 aa11.31□□□□□ -0.6
PTCH1-221ENST00000550914 AMBRA1Q9C0C7 1298 aa11.31□□□□□ -0.6
PTCH1-221ENST00000550914 EXOSC3Q9NQT5 275 aaKnown RBP11.31□□□□□ -0.6
PTCH1-221ENST00000550914 NOP53Q9NZM5 478 aaKnown RBP11.31□□□□□ -0.6
PTCH1-221ENST00000550914 SLC17A7Q9P2U7 560 aa11.31□□□□□ -0.6
PTCH1-221ENST00000550914 ZDHHC2Q9UIJ5 367 aa11.31□□□□□ -0.6
PTCH1-221ENST00000550914 POU2F3Q9UKI9 436 aa11.31□□□□□ -0.6
PTCH1-221ENST00000550914 PCDHGB4Q9UN71 923 aa11.31□□□□□ -0.6
PTCH1-221ENST00000550914 TRAPPC4Q9Y296 219 aa11.31□□□□□ -0.6
PTCH1-221ENST00000550914 FAM234BA2RU67 622 aa11.3□□□□□ -0.6
PTCH1-221ENST00000550914 GPRIN2O60269 458 aa11.3□□□□□ -0.6
PTCH1-221ENST00000550914 MRPL33O75394 65 aaKnown RBP11.3□□□□□ -0.6
PTCH1-221ENST00000550914 SKAP2O75563 359 aaPredicted RBP11.3□□□□□ -0.6
PTCH1-221ENST00000550914 CSF3P09919 207 aa11.3□□□□□ -0.6
PTCH1-221ENST00000550914 BMP4P12644 408 aa11.3□□□□□ -0.6
PTCH1-221ENST00000550914 ARRB2P32121 409 aa11.3□□□□□ -0.6
PTCH1-221ENST00000550914 MAGEA8P43361 318 aa11.3□□□□□ -0.6
PTCH1-221ENST00000550914 HTR3AP46098 478 aa11.3□□□□□ -0.6
PTCH1-221ENST00000550914 ZNF83P51522 516 aa11.3□□□□□ -0.6
PTCH1-221ENST00000550914 MAP2K6P52564 334 aa11.3□□□□□ -0.6
PTCH1-221ENST00000550914 H3F3AP84243 136 aa11.3□□□□□ -0.6
PTCH1-221ENST00000550914 GABRA6Q16445 453 aa11.3□□□□□ -0.6
PTCH1-221ENST00000550914 MAPK14Q16539 360 aa11.3□□□□□ -0.6
PTCH1-221ENST00000550914 PGS1Q32NB8 556 aa11.3□□□□□ -0.6
PTCH1-221ENST00000550914 TYW3Q6IPR3 259 aaKnown RBP11.3□□□□□ -0.6
PTCH1-221ENST00000550914 ZCCHC23Q6ZST2 131 aa11.3□□□□□ -0.6
PTCH1-221ENST00000550914 C17orf78Q8N4C9 275 aa11.3□□□□□ -0.6
PTCH1-221ENST00000550914 C1orf162Q8NEQ5 155 aaPredicted RBP11.3□□□□□ -0.6
PTCH1-221ENST00000550914 OR52N5Q8NH56 324 aa11.3□□□□□ -0.6
PTCH1-221ENST00000550914 ZNF563Q8TA94 476 aa11.3□□□□□ -0.6
PTCH1-221ENST00000550914 TCP10LQ8TDR4 215 aa11.3□□□□□ -0.6
PTCH1-221ENST00000550914 INPP5KQ9BT40 448 aa11.3□□□□□ -0.6
PTCH1-221ENST00000550914 CTPS2Q9NRF8 586 aa11.3□□□□□ -0.6
PTCH1-221ENST00000550914 PARPBPQ9NWS1 579 aa11.3□□□□□ -0.6
PTCH1-221ENST00000550914 LGALS13Q9UHV8 139 aa11.3□□□□□ -0.6
PTCH1-221ENST00000550914 DCTN4Q9UJW0 460 aa11.3□□□□□ -0.6
PTCH1-221ENST00000550914 WDR45Q9Y484 360 aa11.3□□□□□ -0.6
PTCH1-221ENST00000550914 TLDC2A0PJX2 215 aa11.29□□□□□ -0.6
PTCH1-221ENST00000550914 PDLIM1O00151 329 aa11.29□□□□□ -0.6
PTCH1-221ENST00000550914 EIF1BO60739 113 aaKnown RBP11.29□□□□□ -0.6
PTCH1-221ENST00000550914 SCN2BO60939 215 aa11.29□□□□□ -0.6
PTCH1-221ENST00000550914 IGHV3-9P01782 118 aa11.29□□□□□ -0.6
PTCH1-221ENST00000550914 ITGA5P08648 1049 aa11.29□□□□□ -0.6
PTCH1-221ENST00000550914 UQCRC2P22695 453 aa11.29□□□□□ -0.6
PTCH1-221ENST00000550914 NTF4P34130 210 aa11.29□□□□□ -0.6
PTCH1-221ENST00000550914 THBS2P35442 1172 aa11.29□□□□□ -0.6
PTCH1-221ENST00000550914 FABP6P51161 128 aa11.29□□□□□ -0.6
PTCH1-221ENST00000550914 CHRNEQ04844 493 aa11.29□□□□□ -0.6
PTCH1-221ENST00000550914 OR4F3Q6IEY1 312 aa11.29□□□□□ -0.6
PTCH1-221ENST00000550914 EMBQ6PCB8 327 aa11.29□□□□□ -0.6
PTCH1-221ENST00000550914 FRRS1Q6ZNA5 592 aa11.29□□□□□ -0.6
PTCH1-221ENST00000550914 ADGRG3Q86Y34 549 aa11.29□□□□□ -0.6
PTCH1-221ENST00000550914 CMIPQ8IY22 773 aa11.29□□□□□ -0.6
PTCH1-221ENST00000550914 CLECL1Q8IZS7 167 aa11.29□□□□□ -0.6
PTCH1-221ENST00000550914 ARFGAP2Q8N6H7 521 aa11.29□□□□□ -0.6
PTCH1-221ENST00000550914 VPS37AQ8NEZ2 397 aa11.29□□□□□ -0.6
PTCH1-221ENST00000550914 OR4A15Q8NGL6 344 aa11.29□□□□□ -0.6
PTCH1-221ENST00000550914 FAM168AQ92567 244 aa11.29□□□□□ -0.6
PTCH1-221ENST00000550914 PROX1Q92786 737 aa11.29□□□□□ -0.6
PTCH1-221ENST00000550914 PMM1Q92871 262 aa11.29□□□□□ -0.6
PTCH1-221ENST00000550914 ROPN1LQ96C74 230 aa11.29□□□□□ -0.6
PTCH1-221ENST00000550914 ARL5BQ96KC2 179 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms