RNA–Protein interactions for RNA: ENST00000550352.1

GNPTAB-207, Transcript of N-acetylglucosamine-1-phosphate transferase subunits alpha and beta, humanhuman

TSL 3

Gene GNPTAB, Length 787 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNPTAB-207ENST00000550352 RPA1P27694 616 aa3.39□□□□□ -1.87
GNPTAB-207ENST00000550352 HERVK_113P63132 956 aa3.39□□□□□ -1.87
GNPTAB-207ENST00000550352 ERVK-8P63133 956 aa3.39□□□□□ -1.87
GNPTAB-207ENST00000550352 ZP4Q12836 540 aa3.39□□□□□ -1.87
GNPTAB-207ENST00000550352 MAPK6Q16659 721 aa3.39□□□□□ -1.87
GNPTAB-207ENST00000550352 GLYR1Q49A26 553 aaPredicted RBP3.39□□□□□ -1.87
GNPTAB-207ENST00000550352 MEDAGQ5VYS4 303 aa3.39□□□□□ -1.87
GNPTAB-207ENST00000550352 ZNF544Q6NX49 715 aa3.39□□□□□ -1.87
GNPTAB-207ENST00000550352 LEG1Q6P5S2 330 aa3.39□□□□□ -1.87
GNPTAB-207ENST00000550352 TMEM26Q6ZUK4 368 aa3.39□□□□□ -1.87
GNPTAB-207ENST00000550352 PARGQ86W56 976 aa3.39□□□□□ -1.87
GNPTAB-207ENST00000550352 CDR2LQ86X02 465 aaPredicted RBP3.39□□□□□ -1.87
GNPTAB-207ENST00000550352 SLC34A3Q8N130 599 aa3.39□□□□□ -1.87
GNPTAB-207ENST00000550352 TMEM105Q8N8V8 129 aa3.39□□□□□ -1.87
GNPTAB-207ENST00000550352 ERMNQ8TAM6 284 aa3.39□□□□□ -1.87
GNPTAB-207ENST00000550352 IFT74Q96LB3 600 aa3.39□□□□□ -1.87
GNPTAB-207ENST00000550352 KIR2DL4Q99706 377 aa3.39□□□□□ -1.87
GNPTAB-207ENST00000550352 ERVK-6Q9BXR3 956 aa3.39□□□□□ -1.87
GNPTAB-207ENST00000550352 NT5C3AQ9H0P0 336 aa3.39□□□□□ -1.87
GNPTAB-207ENST00000550352 POLR3FQ9H1D9 316 aaPredicted RBP3.39□□□□□ -1.87
GNPTAB-207ENST00000550352 NXF3Q9H4D5 531 aaKnown RBP3.39□□□□□ -1.87
GNPTAB-207ENST00000550352 PDFQ9HBH1 243 aa3.39□□□□□ -1.87
GNPTAB-207ENST00000550352 MARCH5Q9NX47 278 aa3.39□□□□□ -1.87
GNPTAB-207ENST00000550352 DUS2Q9NX74 493 aaKnown RBP3.39□□□□□ -1.87
GNPTAB-207ENST00000550352 EPS15L1Q9UBC2 864 aa3.39□□□□□ -1.87
GNPTAB-207ENST00000550352 GHRLQ9UBU3 117 aa3.39□□□□□ -1.87
GNPTAB-207ENST00000550352 IL20RAQ9UHF4 553 aa3.39□□□□□ -1.87
GNPTAB-207ENST00000550352 ADAM28Q9UKQ2 775 aa3.39□□□□□ -1.87
GNPTAB-207ENST00000550352 SIP14410 1827 aa3.39□□□□□ -1.87
GNPTAB-207ENST00000550352 IGLV8-61A0A075B6I0 122 aa3.38□□□□□ -1.87
GNPTAB-207ENST00000550352 ARHGEF35A5YM69 484 aa3.38□□□□□ -1.87
GNPTAB-207ENST00000550352 CFAP73A6NFT4 308 aa3.38□□□□□ -1.87
GNPTAB-207ENST00000550352 ZFP92A6NM28 416 aa3.38□□□□□ -1.87
GNPTAB-207ENST00000550352 CCDC169A6NNP5 214 aa3.38□□□□□ -1.87
GNPTAB-207ENST00000550352 B4GALT5O43286 388 aa3.38□□□□□ -1.87
GNPTAB-207ENST00000550352 TRAPPC3O43617 180 aa3.38□□□□□ -1.87
GNPTAB-207ENST00000550352 ZBTB14O43829 449 aa3.38□□□□□ -1.87
GNPTAB-207ENST00000550352 JAK2O60674 1132 aa3.38□□□□□ -1.87
GNPTAB-207ENST00000550352 B3GAT3O94766 335 aa3.38□□□□□ -1.87
GNPTAB-207ENST00000550352 LYPD3O95274 346 aa3.38□□□□□ -1.87
GNPTAB-207ENST00000550352 IGFBP1P08833 259 aaPredicted RBP3.38□□□□□ -1.87
GNPTAB-207ENST00000550352 H2AFZP0C0S5 128 aa3.38□□□□□ -1.87
GNPTAB-207ENST00000550352 SLC35G4P0C7Q5 338 aa3.38□□□□□ -1.87
GNPTAB-207ENST00000550352 PRDX2P32119 198 aa3.38□□□□□ -1.87
GNPTAB-207ENST00000550352 NBL1P41271 181 aa3.38□□□□□ -1.87
GNPTAB-207ENST00000550352 NAMPTP43490 491 aa3.38□□□□□ -1.87
GNPTAB-207ENST00000550352 HMGN5P82970 282 aaKnown RBP3.38□□□□□ -1.87
GNPTAB-207ENST00000550352 IL9RQ01113 521 aa3.38□□□□□ -1.87
GNPTAB-207ENST00000550352 ORC2Q13416 577 aaPredicted RBP3.38□□□□□ -1.87
GNPTAB-207ENST00000550352 PDIA5Q14554 519 aa3.38□□□□□ -1.87
GNPTAB-207ENST00000550352 CAMK4Q16566 473 aa3.38□□□□□ -1.87
GNPTAB-207ENST00000550352 CCDC40Q4G0X9 1142 aa3.38□□□□□ -1.87
GNPTAB-207ENST00000550352 PPM1LQ5SGD2 360 aa3.38□□□□□ -1.87
GNPTAB-207ENST00000550352 LIN9Q5TKA1 542 aa3.38□□□□□ -1.87
GNPTAB-207ENST00000550352 ZNF658Q5TYW1 1059 aaPredicted RBP3.38□□□□□ -1.87
GNPTAB-207ENST00000550352 ZNF57Q68EA5 555 aaPredicted RBP3.38□□□□□ -1.87
GNPTAB-207ENST00000550352 ZNF562Q6V9R5 426 aa3.38□□□□□ -1.87
GNPTAB-207ENST00000550352 PAQR9Q6ZVX9 377 aa3.38□□□□□ -1.87
GNPTAB-207ENST00000550352 C9orf40Q8IXQ3 194 aa3.38□□□□□ -1.87
GNPTAB-207ENST00000550352 CEND1Q8N111 149 aa3.38□□□□□ -1.87
GNPTAB-207ENST00000550352 FAM184AQ8NB25 1140 aa3.38□□□□□ -1.87
GNPTAB-207ENST00000550352 ADAMTS16Q8TE57 1224 aa3.38□□□□□ -1.87
GNPTAB-207ENST00000550352 SLC13A3Q8WWT9 602 aa3.38□□□□□ -1.87
GNPTAB-207ENST00000550352 KIFAP3Q92845 792 aa3.38□□□□□ -1.87
GNPTAB-207ENST00000550352 ART4Q93070 314 aa3.38□□□□□ -1.87
GNPTAB-207ENST00000550352 ZNF707Q96C28 371 aaPredicted RBP3.38□□□□□ -1.87
GNPTAB-207ENST00000550352 C8orf76Q96K31 380 aa3.38□□□□□ -1.87
GNPTAB-207ENST00000550352 NSMCE2Q96MF7 247 aa3.38□□□□□ -1.87
GNPTAB-207ENST00000550352 LLPHQ9BRT6 129 aaKnown RBP3.38□□□□□ -1.87
GNPTAB-207ENST00000550352 TCHPQ9BT92 498 aa3.38□□□□□ -1.87
GNPTAB-207ENST00000550352 DPH7Q9BTV6 452 aa3.38□□□□□ -1.87
GNPTAB-207ENST00000550352 TSSK1BQ9BXA7 367 aa3.38□□□□□ -1.87
GNPTAB-207ENST00000550352 ABCG8Q9H221 673 aa3.38□□□□□ -1.87
GNPTAB-207ENST00000550352 POLD4Q9HCU8 107 aa3.38□□□□□ -1.87
GNPTAB-207ENST00000550352 ANO10Q9NW15 660 aa3.38□□□□□ -1.87
GNPTAB-207ENST00000550352 GDAP2Q9NXN4 497 aa3.38□□□□□ -1.87
GNPTAB-207ENST00000550352 ANAPC11Q9NYG5 84 aa3.38□□□□□ -1.87
GNPTAB-207ENST00000550352 CNOT2Q9NZN8 540 aaKnown RBP3.38□□□□□ -1.87
GNPTAB-207ENST00000550352 ZNF490Q9ULM2 529 aaPredicted RBP3.38□□□□□ -1.87
GNPTAB-207ENST00000550352 DUSP12Q9UNI6 340 aa3.38□□□□□ -1.87
GNPTAB-207ENST00000550352 ABCG2Q9UNQ0 655 aa3.38□□□□□ -1.87
GNPTAB-207ENST00000550352 PLEKHA6Q9Y2H5 1048 aa3.38□□□□□ -1.87
GNPTAB-207ENST00000550352 BRWD1Q9NSI6 2320 aa3.38□□□□□ -1.87
GNPTAB-207ENST00000550352 SF3B1O75533 1304 aaKnown RBP eCLIP3.38□□□□□ -1.87
GNPTAB-207ENST00000550352 COL4A4P53420 1690 aaPredicted RBP3.37□□□□□ -1.87
GNPTAB-207ENST00000550352 CFAP54Q96N23 3096 aa3.37□□□□□ -1.87
GNPTAB-207ENST00000550352 PRRC2AP48634 2157 aaKnown RBP3.37□□□□□ -1.87
GNPTAB-207ENST00000550352 MUC6Q6W4X9 2439 aa3.37□□□□□ -1.87
GNPTAB-207ENST00000550352 TTC26A0AVF1 554 aa3.37□□□□□ -1.87
GNPTAB-207ENST00000550352 FBLL1A6NHQ2 334 aaKnown RBP3.37□□□□□ -1.87
GNPTAB-207ENST00000550352 H0YL77 283 aa3.37□□□□□ -1.87
GNPTAB-207ENST00000550352 CDX4O14627 284 aaPredicted RBP3.37□□□□□ -1.87
GNPTAB-207ENST00000550352 CCL16O15467 120 aa3.37□□□□□ -1.87
GNPTAB-207ENST00000550352 LATO43561 262 aa3.37□□□□□ -1.87
GNPTAB-207ENST00000550352 N4BP1O75113 896 aaKnown RBP3.37□□□□□ -1.87
GNPTAB-207ENST00000550352 MT-ND3P03897 115 aa3.37□□□□□ -1.87
GNPTAB-207ENST00000550352 ALPPP05187 535 aa3.37□□□□□ -1.87
GNPTAB-207ENST00000550352 ALPPL2P10696 532 aa3.37□□□□□ -1.87
GNPTAB-207ENST00000550352 CCT6AP40227 531 aaKnown RBP3.37□□□□□ -1.87
GNPTAB-207ENST00000550352 P2RY4P51582 365 aa3.37□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms