RNA–Protein interactions for RNA: ENST00000550220.1

VTI1BP3-201, Transcript of vesicle transport through interaction with t-SNAREs 1B pseudogene 3, humanhuman

BASIC

Gene VTI1BP3, Length 636 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BP3-201ENST00000550220 QRSL1Q9H0R6 528 aaKnown RBP9.65□□□□□ -0.86
VTI1BP3-201ENST00000550220 ARMC7Q9H6L4 198 aa9.65□□□□□ -0.86
VTI1BP3-201ENST00000550220 RMND5AQ9H871 391 aa9.65□□□□□ -0.86
VTI1BP3-201ENST00000550220 MANSC1Q9H8J5 431 aa9.65□□□□□ -0.86
VTI1BP3-201ENST00000550220 CACYBPQ9HB71 228 aaKnown RBP9.65□□□□□ -0.86
VTI1BP3-201ENST00000550220 FAIMQ9NVQ4 179 aa9.65□□□□□ -0.86
VTI1BP3-201ENST00000550220 PARPBPQ9NWS1 579 aa9.65□□□□□ -0.86
VTI1BP3-201ENST00000550220 ING1Q9UK53 422 aaPredicted RBP9.65□□□□□ -0.86
VTI1BP3-201ENST00000550220 GPR45Q9Y5Y3 372 aa9.65□□□□□ -0.86
VTI1BP3-201ENST00000550220 ABCA2Q9BZC7 2435 aa9.65□□□□□ -0.86
VTI1BP3-201ENST00000550220 FLNAP21333 2647 aaKnown RBP9.65□□□□□ -0.87
VTI1BP3-201ENST00000550220 IGHV3-15A0A0B4J1V0 119 aa9.64□□□□□ -0.87
VTI1BP3-201ENST00000550220 CFAP73A6NFT4 308 aa9.64□□□□□ -0.87
VTI1BP3-201ENST00000550220 SDHDO14521 159 aa9.64□□□□□ -0.87
VTI1BP3-201ENST00000550220 RFXANKO14593 260 aa9.64□□□□□ -0.87
VTI1BP3-201ENST00000550220 SLC22A3O75751 556 aa9.64□□□□□ -0.87
VTI1BP3-201ENST00000550220 ZCCHC18P0CG32 403 aa9.64□□□□□ -0.87
VTI1BP3-201ENST00000550220 NR2F1P10589 423 aa9.64□□□□□ -0.87
VTI1BP3-201ENST00000550220 GGT1P19440 569 aa9.64□□□□□ -0.87
VTI1BP3-201ENST00000550220 RYKP34925 604 aa9.64□□□□□ -0.87
VTI1BP3-201ENST00000550220 SLC1A3P43003 542 aa9.64□□□□□ -0.87
VTI1BP3-201ENST00000550220 IDH2P48735 452 aaKnown RBP9.64□□□□□ -0.87
VTI1BP3-201ENST00000550220 POLR2HP52434 150 aaKnown RBP9.64□□□□□ -0.87
VTI1BP3-201ENST00000550220 SLC16A1P53985 500 aa9.64□□□□□ -0.87
VTI1BP3-201ENST00000550220 ATP5J2P56134 94 aa9.64□□□□□ -0.87
VTI1BP3-201ENST00000550220 RPS4XP62701 263 aaKnown RBP9.64□□□□□ -0.87
VTI1BP3-201ENST00000550220 SLC35A1P78382 337 aa9.64□□□□□ -0.87
VTI1BP3-201ENST00000550220 PPA1Q15181 289 aa9.64□□□□□ -0.87
VTI1BP3-201ENST00000550220 PDCD4Q53EL6 469 aaKnown RBP9.64□□□□□ -0.87
VTI1BP3-201ENST00000550220 FBXW9Q5XUX1 488 aa9.64□□□□□ -0.87
VTI1BP3-201ENST00000550220 OR7E24Q6IFN5 339 aa9.64□□□□□ -0.87
VTI1BP3-201ENST00000550220 ALKBH2Q6NS38 261 aa9.64□□□□□ -0.87
VTI1BP3-201ENST00000550220 ADGRG3Q86Y34 549 aa9.64□□□□□ -0.87
VTI1BP3-201ENST00000550220 IGFBPL1Q8WX77 278 aa9.64□□□□□ -0.87
VTI1BP3-201ENST00000550220 ZNF75CPQ92670 426 aaPredicted RBP9.64□□□□□ -0.87
VTI1BP3-201ENST00000550220 FBXW5Q969U6 566 aa9.64□□□□□ -0.87
VTI1BP3-201ENST00000550220 APH1AQ96BI3 265 aa9.64□□□□□ -0.87
VTI1BP3-201ENST00000550220 ZNF524Q96C55 264 aa9.64□□□□□ -0.87
VTI1BP3-201ENST00000550220 ZG16BQ96DA0 208 aa9.64□□□□□ -0.87
VTI1BP3-201ENST00000550220 Q96MF0 132 aa9.64□□□□□ -0.87
VTI1BP3-201ENST00000550220 CTPS2Q9NRF8 586 aa9.64□□□□□ -0.87
VTI1BP3-201ENST00000550220 ZIM2Q9NZV7 527 aa9.64□□□□□ -0.87
VTI1BP3-201ENST00000550220 TMEM181Q9P2C4 612 aa9.64□□□□□ -0.87
VTI1BP3-201ENST00000550220 ZNF232Q9UNY5 417 aa9.64□□□□□ -0.87
VTI1BP3-201ENST00000550220 MGAT4BQ9UQ53 548 aa9.64□□□□□ -0.87
VTI1BP3-201ENST00000550220 NOSIPQ9Y314 301 aaKnown RBP9.64□□□□□ -0.87
VTI1BP3-201ENST00000550220 HRNRQ86YZ3 2850 aaPredicted RBP9.63□□□□□ -0.87
VTI1BP3-201ENST00000550220 NF1P21359 2839 aa9.63□□□□□ -0.87
VTI1BP3-201ENST00000550220 CENPVL1A0A0U1RR11 272 aa9.63□□□□□ -0.87
VTI1BP3-201ENST00000550220 H7C1Q1 480 aa9.63□□□□□ -0.87
VTI1BP3-201ENST00000550220 KLF11O14901 512 aa9.63□□□□□ -0.87
VTI1BP3-201ENST00000550220 CLOCKO15516 846 aa9.63□□□□□ -0.87
VTI1BP3-201ENST00000550220 MRPL33O75394 65 aaKnown RBP9.63□□□□□ -0.87
VTI1BP3-201ENST00000550220 PGM3O95394 542 aa9.63□□□□□ -0.87
VTI1BP3-201ENST00000550220 ANP32DO95626 131 aa9.63□□□□□ -0.87
VTI1BP3-201ENST00000550220 ALDOCP09972 364 aaKnown RBP9.63□□□□□ -0.87
VTI1BP3-201ENST00000550220 COX5AP20674 150 aa9.63□□□□□ -0.87
VTI1BP3-201ENST00000550220 EPHA3P29320 983 aa9.63□□□□□ -0.87
VTI1BP3-201ENST00000550220 IDUAP35475 653 aa9.63□□□□□ -0.87
VTI1BP3-201ENST00000550220 CRISP3P54108 245 aa9.63□□□□□ -0.87
VTI1BP3-201ENST00000550220 NME5P56597 212 aa9.63□□□□□ -0.87
VTI1BP3-201ENST00000550220 WDR4P57081 412 aaKnown RBP9.63□□□□□ -0.87
VTI1BP3-201ENST00000550220 COPZ1P61923 177 aa9.63□□□□□ -0.87
VTI1BP3-201ENST00000550220 NXNQ6DKJ4 435 aa9.63□□□□□ -0.87
VTI1BP3-201ENST00000550220 ABLIM2Q6H8Q1 611 aa9.63□□□□□ -0.87
VTI1BP3-201ENST00000550220 KLHL17Q6TDP4 642 aa9.63□□□□□ -0.87
VTI1BP3-201ENST00000550220 SMAP2Q8WU79 429 aaPredicted RBP9.63□□□□□ -0.87
VTI1BP3-201ENST00000550220 WDR60Q8WVS4 1066 aa9.63□□□□□ -0.87
VTI1BP3-201ENST00000550220 ITCHQ96J02 903 aa9.63□□□□□ -0.87
VTI1BP3-201ENST00000550220 MAELQ96JY0 434 aaKnown RBP9.63□□□□□ -0.87
VTI1BP3-201ENST00000550220 TEX37Q96LM6 180 aa9.63□□□□□ -0.87
VTI1BP3-201ENST00000550220 ZNF300Q96RE9 604 aaPredicted RBP9.63□□□□□ -0.87
VTI1BP3-201ENST00000550220 GRIP2Q9C0E4 1043 aa9.63□□□□□ -0.87
VTI1BP3-201ENST00000550220 SLC38A1Q9H2H9 487 aa9.63□□□□□ -0.87
VTI1BP3-201ENST00000550220 RAD21L1Q9H4I0 556 aa9.63□□□□□ -0.87
VTI1BP3-201ENST00000550220 PIF1Q9H611 641 aa9.63□□□□□ -0.87
VTI1BP3-201ENST00000550220 WDR55Q9H6Y2 383 aaPredicted RBP9.63□□□□□ -0.87
VTI1BP3-201ENST00000550220 SDR39U1Q9NRG7 319 aaPredicted RBP9.63□□□□□ -0.87
VTI1BP3-201ENST00000550220 ASB6Q9NWX5 421 aa9.63□□□□□ -0.87
VTI1BP3-201ENST00000550220 P2RX2Q9UBL9 471 aa9.63□□□□□ -0.87
VTI1BP3-201ENST00000550220 LAMP3Q9UQV4 416 aa9.63□□□□□ -0.87
VTI1BP3-201ENST00000550220 SLC9A8Q9Y2E8 581 aa9.63□□□□□ -0.87
VTI1BP3-201ENST00000550220 TMED7-TICAM2A0A0A6YYA0 188 aa9.62□□□□□ -0.87
VTI1BP3-201ENST00000550220 GOLGA8QA0A0J9YX86 632 aa9.62□□□□□ -0.87
VTI1BP3-201ENST00000550220 CIB4A0PJX0 185 aa9.62□□□□□ -0.87
VTI1BP3-201ENST00000550220 FAM234BA2RU67 622 aa9.62□□□□□ -0.87
VTI1BP3-201ENST00000550220 PRAMEF27A3QJZ7 478 aa9.62□□□□□ -0.87
VTI1BP3-201ENST00000550220 GOLGA8OA6NCC3 632 aa9.62□□□□□ -0.87
VTI1BP3-201ENST00000550220 OR5H1A6NKK0 313 aa9.62□□□□□ -0.87
VTI1BP3-201ENST00000550220 C9JVG2 144 aa9.62□□□□□ -0.87
VTI1BP3-201ENST00000550220 GOLGA8NF8WBI6 632 aa9.62□□□□□ -0.87
VTI1BP3-201ENST00000550220 UBDO15205 165 aa9.62□□□□□ -0.87
VTI1BP3-201ENST00000550220 LYZL6O75951 148 aa9.62□□□□□ -0.87
VTI1BP3-201ENST00000550220 PLAUP00749 431 aa9.62□□□□□ -0.87
VTI1BP3-201ENST00000550220 KITP10721 976 aa9.62□□□□□ -0.87
VTI1BP3-201ENST00000550220 RPS4Y1P22090 263 aaKnown RBP9.62□□□□□ -0.87
VTI1BP3-201ENST00000550220 IGHV1-2P23083 117 aa9.62□□□□□ -0.87
VTI1BP3-201ENST00000550220 PAX7P23759 505 aa9.62□□□□□ -0.87
VTI1BP3-201ENST00000550220 PTAFRP25105 342 aa9.62□□□□□ -0.87
VTI1BP3-201ENST00000550220 IL12AP29459 219 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms