RNA–Protein interactions for RNA: ENST00000548821.1

GCN1-205, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

TSL 3

Gene GCN1, Length 504 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-205ENST00000548821 EFNA2O43921 213 aa8.54□□□□□ -1.04
GCN1-205ENST00000548821 ERLIN1O75477 346 aa8.54□□□□□ -1.04
GCN1-205ENST00000548821 KRT33AO76009 404 aa8.54□□□□□ -1.04
GCN1-205ENST00000548821 PGM3O95394 542 aa8.54□□□□□ -1.04
GCN1-205ENST00000548821 GPIP06744 558 aa8.54□□□□□ -1.04
GCN1-205ENST00000548821 NPIPA8P0DM63 369 aa8.54□□□□□ -1.04
GCN1-205ENST00000548821 NID1P14543 1247 aa8.54□□□□□ -1.04
GCN1-205ENST00000548821 IDO1P14902 403 aa8.54□□□□□ -1.04
GCN1-205ENST00000548821 LOXP28300 417 aaPredicted RBP8.54□□□□□ -1.04
GCN1-205ENST00000548821 RYKP34925 604 aa8.54□□□□□ -1.04
GCN1-205ENST00000548821 PGM1P36871 562 aa8.54□□□□□ -1.04
GCN1-205ENST00000548821 SLC1A3P43003 542 aa8.54□□□□□ -1.04
GCN1-205ENST00000548821 IDH2P48735 452 aaKnown RBP8.54□□□□□ -1.04
GCN1-205ENST00000548821 SLC16A1P53985 500 aa8.54□□□□□ -1.04
GCN1-205ENST00000548821 OR2B6P58173 313 aa8.54□□□□□ -1.04
GCN1-205ENST00000548821 BSPH1Q075Z2 132 aa8.54□□□□□ -1.04
GCN1-205ENST00000548821 CASP8Q14790 479 aa8.54□□□□□ -1.04
GCN1-205ENST00000548821 LARS2Q15031 903 aaKnown RBP8.54□□□□□ -1.04
GCN1-205ENST00000548821 RAB35Q15286 201 aa8.54□□□□□ -1.04
GCN1-205ENST00000548821 TOMM34Q15785 309 aaPredicted RBP8.54□□□□□ -1.04
GCN1-205ENST00000548821 SAXO2Q658L1 398 aa8.54□□□□□ -1.04
GCN1-205ENST00000548821 TYW3Q6IPR3 259 aaKnown RBP8.54□□□□□ -1.04
GCN1-205ENST00000548821 TNFAIP8L2Q6P589 184 aaPredicted RBP8.54□□□□□ -1.04
GCN1-205ENST00000548821 CLECL1Q8IZS7 167 aa8.54□□□□□ -1.04
GCN1-205ENST00000548821 POMGNT2Q8NAT1 580 aa8.54□□□□□ -1.04
GCN1-205ENST00000548821 LRRN4CLQ8ND94 238 aa8.54□□□□□ -1.04
GCN1-205ENST00000548821 C1orf162Q8NEQ5 155 aaPredicted RBP8.54□□□□□ -1.04
GCN1-205ENST00000548821 WDR60Q8WVS4 1066 aa8.54□□□□□ -1.04
GCN1-205ENST00000548821 ZNF317Q96PQ6 595 aaPredicted RBP8.54□□□□□ -1.04
GCN1-205ENST00000548821 OR52E6Q96RD3 313 aa8.54□□□□□ -1.04
GCN1-205ENST00000548821 KCNS3Q9BQ31 491 aa8.54□□□□□ -1.04
GCN1-205ENST00000548821 CCDC106Q9BWC9 280 aa8.54□□□□□ -1.04
GCN1-205ENST00000548821 SF3B5Q9BWJ5 86 aaKnown RBP8.54□□□□□ -1.04
GCN1-205ENST00000548821 TAPBPLQ9BX59 468 aa8.54□□□□□ -1.04
GCN1-205ENST00000548821 COQ10BQ9H8M1 238 aa8.54□□□□□ -1.04
GCN1-205ENST00000548821 NKIRAS1Q9NYS0 192 aa8.54□□□□□ -1.04
GCN1-205ENST00000548821 P2RX2Q9UBL9 471 aa8.54□□□□□ -1.04
GCN1-205ENST00000548821 GIMAP2Q9UG22 337 aa8.54□□□□□ -1.04
GCN1-205ENST00000548821 HAO1Q9UJM8 370 aa8.54□□□□□ -1.04
GCN1-205ENST00000548821 DCTN4Q9UJW0 460 aa8.54□□□□□ -1.04
GCN1-205ENST00000548821 AMDHD2Q9Y303 409 aa8.54□□□□□ -1.04
GCN1-205ENST00000548821 IFT52Q9Y366 437 aa8.54□□□□□ -1.04
GCN1-205ENST00000548821 KCNE3Q9Y6H6 103 aa8.54□□□□□ -1.04
GCN1-205ENST00000548821 MED12LQ86YW9 2145 aa8.53□□□□□ -1.04
GCN1-205ENST00000548821 ZNF814B7Z6K7 855 aa8.53□□□□□ -1.04
GCN1-205ENST00000548821 OVOL3O00110 214 aa8.53□□□□□ -1.04
GCN1-205ENST00000548821 RFXANKO14593 260 aa8.53□□□□□ -1.04
GCN1-205ENST00000548821 SMAD9O15198 467 aaKnown RBP8.53□□□□□ -1.04
GCN1-205ENST00000548821 HDAC3O15379 428 aa8.53□□□□□ -1.04
GCN1-205ENST00000548821 SLC22A3O75751 556 aa8.53□□□□□ -1.04
GCN1-205ENST00000548821 LYZL6O75951 148 aa8.53□□□□□ -1.04
GCN1-205ENST00000548821 PGRP06401 933 aa8.53□□□□□ -1.04
GCN1-205ENST00000548821 CSF3P09919 207 aa8.53□□□□□ -1.04
GCN1-205ENST00000548821 COX5AP20674 150 aa8.53□□□□□ -1.04
GCN1-205ENST00000548821 CRISP3P54108 245 aa8.53□□□□□ -1.04
GCN1-205ENST00000548821 SLC18A1P54219 525 aa8.53□□□□□ -1.04
GCN1-205ENST00000548821 RPS26P62854 115 aaKnown RBP8.53□□□□□ -1.04
GCN1-205ENST00000548821 DMTNQ08495 405 aa8.53□□□□□ -1.04
GCN1-205ENST00000548821 FAM174BQ3ZCQ3 159 aa8.53□□□□□ -1.04
GCN1-205ENST00000548821 LIN52Q52LA3 116 aa8.53□□□□□ -1.04
GCN1-205ENST00000548821 PDCD4Q53EL6 469 aaKnown RBP8.53□□□□□ -1.04
GCN1-205ENST00000548821 CEP85LQ5SZL2 805 aa8.53□□□□□ -1.04
GCN1-205ENST00000548821 TMEM225Q6GV28 225 aa8.53□□□□□ -1.04
GCN1-205ENST00000548821 ZNF544Q6NX49 715 aa8.53□□□□□ -1.04
GCN1-205ENST00000548821 SLC22A25Q6T423 547 aa8.53□□□□□ -1.04
GCN1-205ENST00000548821 CLEC2AQ6UVW9 174 aa8.53□□□□□ -1.04
GCN1-205ENST00000548821 MSANTD1Q6ZTZ1 278 aa8.53□□□□□ -1.04
GCN1-205ENST00000548821 Q71RC1 249 aaPredicted RBP8.53□□□□□ -1.04
GCN1-205ENST00000548821 KRTAP1-3Q8IUG1 177 aa8.53□□□□□ -1.04
GCN1-205ENST00000548821 FAM71CQ8NEG0 241 aa8.53□□□□□ -1.04
GCN1-205ENST00000548821 MS4A3Q96HJ5 214 aa8.53□□□□□ -1.04
GCN1-205ENST00000548821 PPP1R36Q96LQ0 422 aa8.53□□□□□ -1.04
GCN1-205ENST00000548821 SMR3AQ99954 134 aa8.53□□□□□ -1.04
GCN1-205ENST00000548821 NUF2Q9BZD4 464 aa8.53□□□□□ -1.04
GCN1-205ENST00000548821 OBP2BQ9NPH6 170 aa8.53□□□□□ -1.04
GCN1-205ENST00000548821 CTPS2Q9NRF8 586 aa8.53□□□□□ -1.04
GCN1-205ENST00000548821 ABCA2Q9BZC7 2435 aa8.53□□□□□ -1.04
GCN1-205ENST00000548821 KIAA1549Q9HCM3 1950 aa8.53□□□□□ -1.04
GCN1-205ENST00000548821 TMED7-TICAM2A0A0A6YYA0 188 aa8.52□□□□□ -1.05
GCN1-205ENST00000548821 IGHV3-15A0A0B4J1V0 119 aa8.52□□□□□ -1.05
GCN1-205ENST00000548821 GOLGA8QA0A0J9YX86 632 aa8.52□□□□□ -1.05
GCN1-205ENST00000548821 GOLGA8OA6NCC3 632 aa8.52□□□□□ -1.05
GCN1-205ENST00000548821 TRIM64A6NGJ6 449 aa8.52□□□□□ -1.05
GCN1-205ENST00000548821 TRIM64BA6NI03 449 aa8.52□□□□□ -1.05
GCN1-205ENST00000548821 AGAP5A6NIR3 686 aa8.52□□□□□ -1.05
GCN1-205ENST00000548821 ESPNB1AK53 854 aa8.52□□□□□ -1.05
GCN1-205ENST00000548821 GOLGA8NF8WBI6 632 aa8.52□□□□□ -1.05
GCN1-205ENST00000548821 ABCD4O14678 606 aa8.52□□□□□ -1.05
GCN1-205ENST00000548821 H6PDO95479 791 aa8.52□□□□□ -1.05
GCN1-205ENST00000548821 ERCC1P07992 297 aaPredicted RBP8.52□□□□□ -1.05
GCN1-205ENST00000548821 DANCRP0C864 163 aa8.52□□□□□ -1.05
GCN1-205ENST00000548821 HOXB1P14653 301 aaPredicted RBP8.52□□□□□ -1.05
GCN1-205ENST00000548821 NCF2P19878 526 aaPredicted RBP8.52□□□□□ -1.05
GCN1-205ENST00000548821 GTF2E2P29084 291 aaKnown RBP8.52□□□□□ -1.05
GCN1-205ENST00000548821 PCSK6P29122 969 aa8.52□□□□□ -1.05
GCN1-205ENST00000548821 SHC1P29353 583 aa8.52□□□□□ -1.05
GCN1-205ENST00000548821 CDH11P55287 796 aa8.52□□□□□ -1.05
GCN1-205ENST00000548821 PRPS1P60891 318 aa8.52□□□□□ -1.05
GCN1-205ENST00000548821 IRX1P78414 480 aaPredicted RBP8.52□□□□□ -1.05
GCN1-205ENST00000548821 ZNF844Q08AG5 666 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms