RNA–Protein interactions for RNA: ENST00000547926.6

CEP290-204, Transcript of centrosomal protein 290, humanhuman

TSL 1 (best)

Gene CEP290, Length 2,122 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEP290-204ENST00000547926 KLK7P49862 253 aa1.3□□□□□ -2.2
CEP290-204ENST00000547926 PLK1P53350 603 aa1.3□□□□□ -2.2
CEP290-204ENST00000547926 NAPAP54920 295 aa1.3□□□□□ -2.2
CEP290-204ENST00000547926 ZNF311Q5JNZ3 666 aa1.3□□□□□ -2.2
CEP290-204ENST00000547926 ATL3Q6DD88 541 aa1.3□□□□□ -2.2
CEP290-204ENST00000547926 NIPAL3Q6P499 406 aa1.3□□□□□ -2.2
CEP290-204ENST00000547926 CENPUQ71F23 418 aa1.3□□□□□ -2.2
CEP290-204ENST00000547926 COX15Q7KZN9 410 aa1.3□□□□□ -2.2
CEP290-204ENST00000547926 CATSPER4Q7RTX7 472 aa1.3□□□□□ -2.2
CEP290-204ENST00000547926 C16orf62Q7Z3J2 963 aa1.3□□□□□ -2.2
CEP290-204ENST00000547926 LINC01551Q86U37 167 aa1.3□□□□□ -2.2
CEP290-204ENST00000547926 MFSD6LQ8IWD5 586 aa1.3□□□□□ -2.2
CEP290-204ENST00000547926 H1FOOQ8IZA3 346 aaPredicted RBP1.3□□□□□ -2.2
CEP290-204ENST00000547926 SVOPLQ8N434 492 aa1.3□□□□□ -2.2
CEP290-204ENST00000547926 KIR3DL3Q8N743 410 aa1.3□□□□□ -2.2
CEP290-204ENST00000547926 MRPL43Q8N983 215 aaKnown RBP1.3□□□□□ -2.2
CEP290-204ENST00000547926 ZNF721Q8TF20 911 aa1.3□□□□□ -2.2
CEP290-204ENST00000547926 KCNA7Q96RP8 456 aa1.3□□□□□ -2.2
CEP290-204ENST00000547926 SLC6A7Q99884 636 aa1.3□□□□□ -2.2
CEP290-204ENST00000547926 CTRCQ99895 268 aa1.3□□□□□ -2.2
CEP290-204ENST00000547926 NRIP2Q9BQI9 281 aa1.3□□□□□ -2.2
CEP290-204ENST00000547926 NECAP2Q9NVZ3 263 aa1.3□□□□□ -2.2
CEP290-204ENST00000547926 RBAKQ9NYW8 714 aaPredicted RBP1.3□□□□□ -2.2
CEP290-204ENST00000547926 NCAPD2Q15021 1401 aa1.29□□□□□ -2.2
CEP290-204ENST00000547926 NCOR2Q9Y618 2525 aa1.29□□□□□ -2.2
CEP290-204ENST00000547926 IGHV3OR16-13A0A075B7E8 117 aa1.29□□□□□ -2.2
CEP290-204ENST00000547926 HELTA6NFD8 242 aa1.29□□□□□ -2.2
CEP290-204ENST00000547926 RASGRF2O14827 1237 aa1.29□□□□□ -2.2
CEP290-204ENST00000547926 HCRTR1O43613 425 aa1.29□□□□□ -2.2
CEP290-204ENST00000547926 KIAA0754O94854 1291 aa1.29□□□□□ -2.2
CEP290-204ENST00000547926 LGI1O95970 557 aa1.29□□□□□ -2.2
CEP290-204ENST00000547926 CHTF8P0CG12 524 aa1.29□□□□□ -2.2
CEP290-204ENST00000547926 ATP6V1B2P21281 511 aa1.29□□□□□ -2.2
CEP290-204ENST00000547926 KIF5BP33176 963 aa1.29□□□□□ -2.2
CEP290-204ENST00000547926 CSNK1DP48730 415 aa1.29□□□□□ -2.2
CEP290-204ENST00000547926 CRISP3P54108 245 aa1.29□□□□□ -2.2
CEP290-204ENST00000547926 HSPA2P54652 639 aa1.29□□□□□ -2.2
CEP290-204ENST00000547926 SH3BGRP55822 239 aaPredicted RBP1.29□□□□□ -2.2
CEP290-204ENST00000547926 ZNF763Q0D2J5 394 aa1.29□□□□□ -2.2
CEP290-204ENST00000547926 GGTLC2Q14390 218 aa1.29□□□□□ -2.2
CEP290-204ENST00000547926 NSUN5P1Q3KNT7 163 aa1.29□□□□□ -2.2
CEP290-204ENST00000547926 GPRC6AQ5T6X5 926 aa1.29□□□□□ -2.2
CEP290-204ENST00000547926 C12orf60Q5U649 245 aa1.29□□□□□ -2.2
CEP290-204ENST00000547926 CCDC137Q6PK04 289 aaKnown RBP1.29□□□□□ -2.2
CEP290-204ENST00000547926 RBM43Q6ZSC3 357 aaKnown RBP1.29□□□□□ -2.2
CEP290-204ENST00000547926 KIAA1328Q86T90 577 aa1.29□□□□□ -2.2
CEP290-204ENST00000547926 C6orf223Q8N319 242 aa1.29□□□□□ -2.2
CEP290-204ENST00000547926 PNPT1Q8TCS8 783 aaKnown RBP1.29□□□□□ -2.2
CEP290-204ENST00000547926 RPL3LQ92901 407 aaKnown RBP1.29□□□□□ -2.2
CEP290-204ENST00000547926 FAM111AQ96PZ2 611 aa1.29□□□□□ -2.2
CEP290-204ENST00000547926 NAT10Q9H0A0 1025 aaKnown RBP1.29□□□□□ -2.2
CEP290-204ENST00000547926 ZNF385DQ9H6B1 395 aa1.29□□□□□ -2.2
CEP290-204ENST00000547926 VCPKMTQ9H867 229 aa1.29□□□□□ -2.2
CEP290-204ENST00000547926 TBX21Q9UL17 535 aa1.29□□□□□ -2.2
CEP290-204ENST00000547926 MAP3K15Q6ZN16 1313 aa1.29□□□□□ -2.2
CEP290-204ENST00000547926 TENM4Q6N022 2769 aa1.29□□□□□ -2.2
CEP290-204ENST00000547926 HIVEP2P31629 2446 aa1.29□□□□□ -2.2
CEP290-204ENST00000547926 FCGBPQ9Y6R7 5405 aaPredicted RBP1.29□□□□□ -2.2
CEP290-204ENST00000547926 IGHV2-70DA0A0C4DH43 119 aa1.28□□□□□ -2.2
CEP290-204ENST00000547926 RNF103-CHMP3A0A140T963 221 aa1.28□□□□□ -2.2
CEP290-204ENST00000547926 A6NIZ1 184 aa1.28□□□□□ -2.2
CEP290-204ENST00000547926 CHADO15335 359 aa1.28□□□□□ -2.2
CEP290-204ENST00000547926 SLC25A27O95847 323 aa1.28□□□□□ -2.2
CEP290-204ENST00000547926 GIPP09681 153 aaPredicted RBP1.28□□□□□ -2.2
CEP290-204ENST00000547926 TPSB2P20231 275 aa1.28□□□□□ -2.2
CEP290-204ENST00000547926 OTX2P32243 289 aa1.28□□□□□ -2.2
CEP290-204ENST00000547926 LEPP41159 167 aa1.28□□□□□ -2.2
CEP290-204ENST00000547926 RAP1BP61224 184 aa1.28□□□□□ -2.2
CEP290-204ENST00000547926 HERVK_113P61574 105 aa1.28□□□□□ -2.2
CEP290-204ENST00000547926 SELENOTP62341 195 aa1.28□□□□□ -2.2
CEP290-204ENST00000547926 PSG5Q15238 335 aa1.28□□□□□ -2.2
CEP290-204ENST00000547926 TPSAB1Q15661 275 aa1.28□□□□□ -2.2
CEP290-204ENST00000547926 NRF1Q16656 503 aa1.28□□□□□ -2.2
CEP290-204ENST00000547926 PARP10Q53GL7 1025 aa1.28□□□□□ -2.2
CEP290-204ENST00000547926 KLF17Q5JT82 389 aaPredicted RBP1.28□□□□□ -2.2
CEP290-204ENST00000547926 OR52W1Q6IF63 320 aa1.28□□□□□ -2.2
CEP290-204ENST00000547926 CBLN3Q6UW01 205 aa1.28□□□□□ -2.2
CEP290-204ENST00000547926 DENND6BQ8NEG7 585 aa1.28□□□□□ -2.2
CEP290-204ENST00000547926 OR8H1Q8NGG4 311 aa1.28□□□□□ -2.2
CEP290-204ENST00000547926 RAPGEF5Q92565 580 aa1.28□□□□□ -2.2
CEP290-204ENST00000547926 ARPC1AQ92747 370 aa1.28□□□□□ -2.2
CEP290-204ENST00000547926 TIMD4Q96H15 378 aa1.28□□□□□ -2.2
CEP290-204ENST00000547926 HDHD3Q9BSH5 251 aaPredicted RBP1.28□□□□□ -2.2
CEP290-204ENST00000547926 HSD3B7Q9H2F3 369 aa1.28□□□□□ -2.2
CEP290-204ENST00000547926 ERVW-1Q9UQF0 538 aa1.28□□□□□ -2.2
CEP290-204ENST00000547926 PIN4Q9Y237 131 aaKnown RBP1.28□□□□□ -2.2
CEP290-204ENST00000547926 ASF1AQ9Y294 204 aa1.28□□□□□ -2.2
CEP290-204ENST00000547926 CLCA3PQ9Y6N3 262 aa1.28□□□□□ -2.2
CEP290-204ENST00000547926 DOCK9Q9BZ29 2069 aa1.28□□□□□ -2.2
CEP290-204ENST00000547926 FRMPD4Q14CM0 1322 aa1.28□□□□□ -2.2
CEP290-204ENST00000547926 KIF26AQ9ULI4 1882 aaPredicted RBP1.28□□□□□ -2.2
CEP290-204ENST00000547926 CARMIL1Q5VZK9 1371 aa1.28□□□□□ -2.2
CEP290-204ENST00000547926 E9PBE3 544 aa1.28□□□□□ -2.2
CEP290-204ENST00000547926 G3V4G9 280 aa1.28□□□□□ -2.2
CEP290-204ENST00000547926 NBR2O15453 112 aa1.28□□□□□ -2.2
CEP290-204ENST00000547926 P04436 131 aa1.28□□□□□ -2.2
CEP290-204ENST00000547926 ZNF823P16415 610 aa1.28□□□□□ -2.2
CEP290-204ENST00000547926 TBXA2RP21731 343 aa1.28□□□□□ -2.2
CEP290-204ENST00000547926 ATP6V1E1P36543 226 aa1.28□□□□□ -2.2
CEP290-204ENST00000547926 RPS9P46781 194 aaKnown RBP1.28□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms