RNA–Protein interactions for RNA: ENST00000547862.6

SSH1-207, Transcript of slingshot protein phosphatase 1, humanhuman

TSL 5

Gene SSH1, Length 625 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-207ENST00000547862 HEATR1Q9H583 2144 aaKnown RBP17.95■□□□□ 0.46
SSH1-207ENST00000547862 FBN3Q75N90 2809 aa17.94■□□□□ 0.46
SSH1-207ENST00000547862 IGHV4-30-2A0A087WSY4 118 aa17.94■□□□□ 0.46
SSH1-207ENST00000547862 ZNF716A6NP11 495 aa17.94■□□□□ 0.46
SSH1-207ENST00000547862 CD5LO43866 347 aa17.94■□□□□ 0.46
SSH1-207ENST00000547862 FOXG1P55316 489 aaPredicted RBP17.94■□□□□ 0.46
SSH1-207ENST00000547862 IRX1P78414 480 aaPredicted RBP17.94■□□□□ 0.46
SSH1-207ENST00000547862 EMBQ6PCB8 327 aa17.94■□□□□ 0.46
SSH1-207ENST00000547862 TMEM108Q6UXF1 575 aa17.94■□□□□ 0.46
SSH1-207ENST00000547862 FRRS1Q6ZNA5 592 aa17.94■□□□□ 0.46
SSH1-207ENST00000547862 MTDHQ86UE4 582 aaKnown RBP17.94■□□□□ 0.46
SSH1-207ENST00000547862 CCDC103Q8IW40 242 aa17.94■□□□□ 0.46
SSH1-207ENST00000547862 FAM71CQ8NEG0 241 aa17.94■□□□□ 0.46
SSH1-207ENST00000547862 PIGXQ8TBF5 258 aa17.94■□□□□ 0.46
SSH1-207ENST00000547862 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP17.94■□□□□ 0.461e-6■■■■■ 56.2
SSH1-207ENST00000547862 SLC35A5Q9BS91 424 aa17.94■□□□□ 0.46
SSH1-207ENST00000547862 ASB6Q9NWX5 421 aa17.94■□□□□ 0.46
SSH1-207ENST00000547862 ASIC5Q9NY37 505 aa17.94■□□□□ 0.46
SSH1-207ENST00000547862 MARCOQ9UEW3 520 aaPredicted RBP17.94■□□□□ 0.46
SSH1-207ENST00000547862 E7EQL1 145 aa17.93■□□□□ 0.46
SSH1-207ENST00000547862 AP3D1O14617 1153 aa17.93■□□□□ 0.46
SSH1-207ENST00000547862 DNAJA2O60884 412 aa17.93■□□□□ 0.46
SSH1-207ENST00000547862 AGR2O95994 175 aa17.93■□□□□ 0.46
SSH1-207ENST00000547862 C1QCP02747 245 aa17.93■□□□□ 0.46
SSH1-207ENST00000547862 UQCRC2P22695 453 aa17.93■□□□□ 0.46
SSH1-207ENST00000547862 APOBEC1P41238 236 aaKnown RBP17.93■□□□□ 0.46
SSH1-207ENST00000547862 NME5P56597 212 aa17.93■□□□□ 0.46
SSH1-207ENST00000547862 NRF1Q16656 503 aa17.93■□□□□ 0.46
SSH1-207ENST00000547862 SPANXN4Q5MJ08 99 aa17.93■□□□□ 0.46
SSH1-207ENST00000547862 SAXO2Q658L1 398 aa17.93■□□□□ 0.46
SSH1-207ENST00000547862 KLHL17Q6TDP4 642 aa17.93■□□□□ 0.46
SSH1-207ENST00000547862 B3GLCTQ6Y288 498 aa17.93■□□□□ 0.46
SSH1-207ENST00000547862 GRINAQ7Z429 371 aa17.93■□□□□ 0.46
SSH1-207ENST00000547862 ARFGAP2Q8N6H7 521 aa17.93■□□□□ 0.46
SSH1-207ENST00000547862 OR52E4Q8NGH9 312 aa17.93■□□□□ 0.46
SSH1-207ENST00000547862 ZBTB9Q96C00 473 aa17.93■□□□□ 0.46
SSH1-207ENST00000547862 ADAD1Q96M93 576 aaKnown RBP17.93■□□□□ 0.46
SSH1-207ENST00000547862 RHNO1Q9BSD3 238 aa17.93■□□□□ 0.46
SSH1-207ENST00000547862 ALPK2Q86TB3 2170 aa17.93■□□□□ 0.46
SSH1-207ENST00000547862 ATRQ13535 2644 aa17.92■□□□□ 0.46
SSH1-207ENST00000547862 IGKV3D-15A0A087WSY6 115 aa17.92■□□□□ 0.46
SSH1-207ENST00000547862 RNF212BA8MTL3 300 aa17.92■□□□□ 0.46
SSH1-207ENST00000547862 ANKRD28O15084 1053 aa17.92■□□□□ 0.46
SSH1-207ENST00000547862 TYROBPO43914 113 aa17.92■□□□□ 0.46
SSH1-207ENST00000547862 GPRIN2O60269 458 aa17.92■□□□□ 0.46
SSH1-207ENST00000547862 MRPL33O75394 65 aaKnown RBP17.92■□□□□ 0.46
SSH1-207ENST00000547862 PGM3O95394 542 aa17.92■□□□□ 0.46
SSH1-207ENST00000547862 PMS2P2O95744 297 aa17.92■□□□□ 0.46
SSH1-207ENST00000547862 SERPINE1P05121 402 aa17.92■□□□□ 0.46
SSH1-207ENST00000547862 DHRS4L1P0CG22 281 aa17.92■□□□□ 0.46
SSH1-207ENST00000547862 ETV4P43268 484 aa17.92■□□□□ 0.46
SSH1-207ENST00000547862 IDH2P48735 452 aaKnown RBP17.92■□□□□ 0.46
SSH1-207ENST00000547862 ABCE1P61221 599 aaKnown RBP17.92■□□□□ 0.46
SSH1-207ENST00000547862 CLEC2AQ6UVW9 174 aa17.92■□□□□ 0.46
SSH1-207ENST00000547862 DNAJC14Q6Y2X3 702 aaPredicted RBP17.92■□□□□ 0.46
SSH1-207ENST00000547862 P2RY8Q86VZ1 359 aa17.92■□□□□ 0.46
SSH1-207ENST00000547862 FBXL14Q8N1E6 418 aa17.92■□□□□ 0.46
SSH1-207ENST00000547862 OR8J2Q8NGG1 315 aa17.92■□□□□ 0.46
SSH1-207ENST00000547862 MIPOL1Q8TD10 442 aa17.92■□□□□ 0.46
SSH1-207ENST00000547862 CNOT9Q92600 299 aaKnown RBP17.92■□□□□ 0.46
SSH1-207ENST00000547862 ZG16BQ96DA0 208 aa17.92■□□□□ 0.46
SSH1-207ENST00000547862 ST6GALNAC1Q9NSC7 600 aaPredicted RBP17.92■□□□□ 0.46
SSH1-207ENST00000547862 TAS2R16Q9NYV7 291 aa17.92■□□□□ 0.46
SSH1-207ENST00000547862 HDGFL3Q9Y3E1 203 aa17.92■□□□□ 0.46
SSH1-207ENST00000547862 SLC25A15Q9Y619 301 aa17.92■□□□□ 0.46
SSH1-207ENST00000547862 COL6A5A8TX70 2615 aa17.91■□□□□ 0.46
SSH1-207ENST00000547862 FAM234BA2RU67 622 aa17.91■□□□□ 0.46
SSH1-207ENST00000547862 TLX2O43763 284 aaPredicted RBP17.91■□□□□ 0.46
SSH1-207ENST00000547862 THBS1P07996 1170 aa17.91■□□□□ 0.46
SSH1-207ENST00000547862 ITGA5P08648 1049 aa17.91■□□□□ 0.46
SSH1-207ENST00000547862 CD40P25942 277 aa17.91■□□□□ 0.46
SSH1-207ENST00000547862 NTF4P34130 210 aa17.91■□□□□ 0.46
SSH1-207ENST00000547862 MAGEA8P43361 318 aa17.91■□□□□ 0.46
SSH1-207ENST00000547862 FABP6P51161 128 aa17.91■□□□□ 0.46
SSH1-207ENST00000547862 PHC1P78364 1004 aa17.91■□□□□ 0.46
SSH1-207ENST00000547862 PLAURQ03405 335 aa17.91■□□□□ 0.46
SSH1-207ENST00000547862 KRT71Q3SY84 523 aa17.91■□□□□ 0.46
SSH1-207ENST00000547862 FAM174BQ3ZCQ3 159 aa17.91■□□□□ 0.46
SSH1-207ENST00000547862 ANXA8L1Q5VT79 327 aa17.91■□□□□ 0.46
SSH1-207ENST00000547862 DNM1P46Q6ZS02 220 aa17.91■□□□□ 0.46
SSH1-207ENST00000547862 VPS37AQ8NEZ2 397 aa17.91■□□□□ 0.46
SSH1-207ENST00000547862 NUF2Q9BZD4 464 aa17.91■□□□□ 0.46
SSH1-207ENST00000547862 ROPN1BQ9BZX4 212 aaPredicted RBP17.91■□□□□ 0.46
SSH1-207ENST00000547862 ROPN1Q9HAT0 212 aaPredicted RBP17.91■□□□□ 0.46
SSH1-207ENST00000547862 POLE3Q9NRF9 147 aa17.91■□□□□ 0.46
SSH1-207ENST00000547862 CBLN4Q9NTU7 201 aa17.91■□□□□ 0.46
SSH1-207ENST00000547862 UPB1Q9UBR1 384 aa17.91■□□□□ 0.46
SSH1-207ENST00000547862 MGAT4BQ9UQ53 548 aa17.91■□□□□ 0.46
SSH1-207ENST00000547862 ATP23Q9Y6H3 246 aa17.91■□□□□ 0.46
SSH1-207ENST00000547862 TMED7-TICAM2A0A0A6YYA0 188 aa17.9■□□□□ 0.46
SSH1-207ENST00000547862 PRSS51A0A1B0GVH4 220 aa17.9■□□□□ 0.46
SSH1-207ENST00000547862 TMEM72A0PK05 275 aa17.9■□□□□ 0.46
SSH1-207ENST00000547862 GPR171O14626 319 aa17.9■□□□□ 0.46
SSH1-207ENST00000547862 MYZAPP0CAP1 466 aa17.9■□□□□ 0.46
SSH1-207ENST00000547862 PTAFRP25105 342 aa17.9■□□□□ 0.46
SSH1-207ENST00000547862 TTKP33981 857 aa17.9■□□□□ 0.46
SSH1-207ENST00000547862 KCNJ10P78508 379 aa17.9■□□□□ 0.46
SSH1-207ENST00000547862 PDK3Q15120 406 aa17.9■□□□□ 0.46
SSH1-207ENST00000547862 SMU1Q2TAY7 513 aa17.9■□□□□ 0.46
SSH1-207ENST00000547862 C11orf71Q6IPW1 123 aa17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms