RNA–Protein interactions for RNA: ENST00000546304.1

PRKDC-211, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-211ENST00000546304 ARHGAP21Q5T5U3 1957 aa5.74□□□□□ -1.49
PRKDC-211ENST00000546304 DOPEY1Q5JWR5 2465 aa5.74□□□□□ -1.49
PRKDC-211ENST00000546304 COL12A1Q99715 3063 aa5.74□□□□□ -1.49
PRKDC-211ENST00000546304 C7orf72A4D263 438 aa5.73□□□□□ -1.49
PRKDC-211ENST00000546304 ANKUB1A6NFN9 424 aa5.73□□□□□ -1.49
PRKDC-211ENST00000546304 B8ZZF3 427 aa5.73□□□□□ -1.49
PRKDC-211ENST00000546304 NPIPA5E9PKD4 350 aa5.73□□□□□ -1.49
PRKDC-211ENST00000546304 GTPBP1O00178 669 aaKnown RBP5.73□□□□□ -1.49
PRKDC-211ENST00000546304 SYT5O00445 386 aa5.73□□□□□ -1.49
PRKDC-211ENST00000546304 EBAG9O00559 213 aa5.73□□□□□ -1.49
PRKDC-211ENST00000546304 CXCR6O00574 342 aa5.73□□□□□ -1.49
PRKDC-211ENST00000546304 ARPC2O15144 300 aa5.73□□□□□ -1.49
PRKDC-211ENST00000546304 GSTA4O15217 222 aa5.73□□□□□ -1.49
PRKDC-211ENST00000546304 GYG2O15488 501 aa5.73□□□□□ -1.49
PRKDC-211ENST00000546304 SUV39H1O43463 412 aa5.73□□□□□ -1.49
PRKDC-211ENST00000546304 SUSD5O60279 629 aa5.73□□□□□ -1.49
PRKDC-211ENST00000546304 CDC40O60508 579 aaKnown RBP eCLIP5.73□□□□□ -1.49
PRKDC-211ENST00000546304 EIF4E2O60573 245 aaKnown RBP5.73□□□□□ -1.49
PRKDC-211ENST00000546304 GCM2O75603 506 aaPredicted RBP5.73□□□□□ -1.49
PRKDC-211ENST00000546304 CBR3O75828 277 aa5.73□□□□□ -1.49
PRKDC-211ENST00000546304 MFN2O95140 757 aa5.73□□□□□ -1.49
PRKDC-211ENST00000546304 NUDT14O95848 222 aa5.73□□□□□ -1.49
PRKDC-211ENST00000546304 SCG5P05408 212 aa5.73□□□□□ -1.49
PRKDC-211ENST00000546304 HPNP05981 417 aa5.73□□□□□ -1.49
PRKDC-211ENST00000546304 THBDP07204 575 aa5.73□□□□□ -1.49
PRKDC-211ENST00000546304 UQCRBP14927 111 aa5.73□□□□□ -1.49
PRKDC-211ENST00000546304 ZNF17P17021 662 aa5.73□□□□□ -1.49
PRKDC-211ENST00000546304 GGT1P19440 569 aa5.73□□□□□ -1.49
PRKDC-211ENST00000546304 TCN1P20061 433 aaPredicted RBP5.73□□□□□ -1.49
PRKDC-211ENST00000546304 TCEA1P23193 301 aaKnown RBP5.73□□□□□ -1.49
PRKDC-211ENST00000546304 MST1P26927 711 aa5.73□□□□□ -1.49
PRKDC-211ENST00000546304 DPP4P27487 766 aa5.73□□□□□ -1.49
PRKDC-211ENST00000546304 HTR1EP28566 365 aa5.73□□□□□ -1.49
PRKDC-211ENST00000546304 SRD5A2P31213 254 aa5.73□□□□□ -1.49
PRKDC-211ENST00000546304 DNAJA1P31689 397 aaKnown RBP5.73□□□□□ -1.49
PRKDC-211ENST00000546304 P2RX1P51575 399 aa5.73□□□□□ -1.49
PRKDC-211ENST00000546304 DSCR4P56555 118 aaPredicted RBP5.73□□□□□ -1.49
PRKDC-211ENST00000546304 NCALDP61601 193 aa5.73□□□□□ -1.49
PRKDC-211ENST00000546304 TLE1Q04724 770 aa5.73□□□□□ -1.49
PRKDC-211ENST00000546304 GABPB1Q06547 395 aaPredicted RBP5.73□□□□□ -1.49
PRKDC-211ENST00000546304 DMTNQ08495 405 aa5.73□□□□□ -1.49
PRKDC-211ENST00000546304 FOXF1Q12946 379 aa5.73□□□□□ -1.49
PRKDC-211ENST00000546304 BNIP2Q12982 314 aa5.73□□□□□ -1.49
PRKDC-211ENST00000546304 CBFBQ13951 182 aa5.73□□□□□ -1.49
PRKDC-211ENST00000546304 CEACAM7Q14002 265 aa5.73□□□□□ -1.49
PRKDC-211ENST00000546304 TOMM20Q15388 145 aa5.73□□□□□ -1.49
PRKDC-211ENST00000546304 ZSWIM7Q19AV6 140 aa5.73□□□□□ -1.49
PRKDC-211ENST00000546304 PLPPR5Q32ZL2 321 aa5.73□□□□□ -1.49
PRKDC-211ENST00000546304 ZNF311Q5JNZ3 666 aa5.73□□□□□ -1.49
PRKDC-211ENST00000546304 RAET1LQ5VY80 246 aa5.73□□□□□ -1.49
PRKDC-211ENST00000546304 ARSKQ6UWY0 536 aa5.73□□□□□ -1.49
PRKDC-211ENST00000546304 CCDC121Q6ZUS5 278 aa5.73□□□□□ -1.49
PRKDC-211ENST00000546304 CCDC80Q76M96 950 aa5.73□□□□□ -1.49
PRKDC-211ENST00000546304 COMTD1Q86VU5 262 aa5.73□□□□□ -1.49
PRKDC-211ENST00000546304 GRAMD2AQ8IUY3 354 aa5.73□□□□□ -1.49
PRKDC-211ENST00000546304 ZNF440Q8IYI8 595 aa5.73□□□□□ -1.49
PRKDC-211ENST00000546304 GHDCQ8N2G8 530 aa5.73□□□□□ -1.49
PRKDC-211ENST00000546304 SMYD1Q8NB12 490 aa5.73□□□□□ -1.49
PRKDC-211ENST00000546304 FAM83FQ8NEG4 500 aaPredicted RBP5.73□□□□□ -1.49
PRKDC-211ENST00000546304 OR5W2Q8NH69 310 aa5.73□□□□□ -1.49
PRKDC-211ENST00000546304 OR14L1PQ8NHC6 308 aa5.73□□□□□ -1.49
PRKDC-211ENST00000546304 DUSP19Q8WTR2 217 aa5.73□□□□□ -1.49
PRKDC-211ENST00000546304 RASSF5Q8WWW0 418 aa5.73□□□□□ -1.49
PRKDC-211ENST00000546304 CNOT9Q92600 299 aaKnown RBP5.73□□□□□ -1.49
PRKDC-211ENST00000546304 SLC7A6OSQ96CW6 309 aaPredicted RBP5.73□□□□□ -1.49
PRKDC-211ENST00000546304 ARSGQ96EG1 525 aa5.73□□□□□ -1.49
PRKDC-211ENST00000546304 CCDC140Q96MF4 163 aa5.73□□□□□ -1.49
PRKDC-211ENST00000546304 RNF145Q96MT1 663 aa5.73□□□□□ -1.49
PRKDC-211ENST00000546304 GPR137Q96N19 417 aa5.73□□□□□ -1.49
PRKDC-211ENST00000546304 DOCK7Q96N67 2140 aa5.73□□□□□ -1.49
PRKDC-211ENST00000546304 CDRT15Q96T59 188 aa5.73□□□□□ -1.49
PRKDC-211ENST00000546304 BARD1Q99728 777 aaKnown RBP5.73□□□□□ -1.49
PRKDC-211ENST00000546304 KLHDC3Q9BQ90 382 aa5.73□□□□□ -1.49
PRKDC-211ENST00000546304 PINK1Q9BXM7 581 aa5.73□□□□□ -1.49
PRKDC-211ENST00000546304 LAT2Q9GZY6 243 aa5.73□□□□□ -1.49
PRKDC-211ENST00000546304 LRMDAQ9H2I8 198 aa5.73□□□□□ -1.49
PRKDC-211ENST00000546304 SLC6A15Q9H2J7 730 aa5.73□□□□□ -1.49
PRKDC-211ENST00000546304 DSN1Q9H410 356 aa5.73□□□□□ -1.49
PRKDC-211ENST00000546304 ARMC7Q9H6L4 198 aa5.73□□□□□ -1.49
PRKDC-211ENST00000546304 MED17Q9NVC6 651 aa5.73□□□□□ -1.49
PRKDC-211ENST00000546304 ASF1BQ9NVP2 202 aa5.73□□□□□ -1.49
PRKDC-211ENST00000546304 RLIMQ9NVW2 624 aa5.73□□□□□ -1.49
PRKDC-211ENST00000546304 TAS2R10Q9NYW0 307 aa5.73□□□□□ -1.49
PRKDC-211ENST00000546304 TAS2R1Q9NYW7 299 aa5.73□□□□□ -1.49
PRKDC-211ENST00000546304 MED11Q9P086 117 aa5.73□□□□□ -1.49
PRKDC-211ENST00000546304 CD300AQ9UGN4 299 aa5.73□□□□□ -1.49
PRKDC-211ENST00000546304 SLC13A4Q9UKG4 626 aa5.73□□□□□ -1.49
PRKDC-211ENST00000546304 ICAM5Q9UMF0 924 aa5.73□□□□□ -1.49
PRKDC-211ENST00000546304 NPIPA1Q9UND3 350 aa5.73□□□□□ -1.49
PRKDC-211ENST00000546304 VDAC3Q9Y277 283 aa5.73□□□□□ -1.49
PRKDC-211ENST00000546304 CHST2Q9Y4C5 530 aa5.73□□□□□ -1.49
PRKDC-211ENST00000546304 SNX13Q9Y5W8 968 aa5.73□□□□□ -1.49
PRKDC-211ENST00000546304 PHF3Q92576 2039 aaKnown RBP5.73□□□□□ -1.49
PRKDC-211ENST00000546304 INTS1Q8N201 2190 aaKnown RBP5.73□□□□□ -1.49
PRKDC-211ENST00000546304 ADGRG4Q8IZF6 3080 aa5.73□□□□□ -1.49
PRKDC-211ENST00000546304 CACNA1CQ13936 2221 aa5.72□□□□□ -1.49
PRKDC-211ENST00000546304 PTPN13Q12923 2485 aa5.72□□□□□ -1.49
PRKDC-211ENST00000546304 A0A087WZY1 265 aa5.72□□□□□ -1.49
PRKDC-211ENST00000546304 TRGV5A0A0B4J1U4 118 aa5.72□□□□□ -1.49
PRKDC-211ENST00000546304 ZC3H12DA2A288 527 aaKnown RBP5.72□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms