RNA–Protein interactions for RNA: ENST00000545689.2

COL4A6-209, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,380 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-209ENST00000545689 UBE2UQ5VVX9 321 aa11.68□□□□□ -0.54
COL4A6-209ENST00000545689 OR7G1Q8NGA0 311 aa11.68□□□□□ -0.54
COL4A6-209ENST00000545689 DCUN1D4Q92564 292 aa11.68□□□□□ -0.54
COL4A6-209ENST00000545689 RRNAD1Q96FB5 475 aaKnown RBP11.68□□□□□ -0.54
COL4A6-209ENST00000545689 CHRDQ9H2X0 955 aa11.68□□□□□ -0.54
COL4A6-209ENST00000545689 KIR3DX1Q9H7L2 352 aa11.68□□□□□ -0.54
COL4A6-209ENST00000545689 KLF15Q9UIH9 416 aa11.68□□□□□ -0.54
COL4A6-209ENST00000545689 ADAMTS7Q9UKP4 1686 aa11.68□□□□□ -0.54
COL4A6-209ENST00000545689 ARPC5O15511 151 aa11.67□□□□□ -0.54
COL4A6-209ENST00000545689 TPT1P13693 172 aaKnown RBP11.67□□□□□ -0.54
COL4A6-209ENST00000545689 MTHFD2P13995 350 aa11.67□□□□□ -0.54
COL4A6-209ENST00000545689 POLR2HP52434 150 aaKnown RBP11.67□□□□□ -0.54
COL4A6-209ENST00000545689 WDR88Q6ZMY6 472 aa11.67□□□□□ -0.54
COL4A6-209ENST00000545689 OR6V1Q8N148 313 aa11.67□□□□□ -0.54
COL4A6-209ENST00000545689 FAM160A2Q8N612 972 aaPredicted RBP11.67□□□□□ -0.54
COL4A6-209ENST00000545689 GIMAP5Q96F15 307 aa11.67□□□□□ -0.54
COL4A6-209ENST00000545689 OR5B12Q96R08 314 aa11.67□□□□□ -0.54
COL4A6-209ENST00000545689 ETV7Q9Y603 341 aa11.67□□□□□ -0.54
COL4A6-209ENST00000545689 PCBD1P61457 104 aa11.67□□□□□ -0.54
COL4A6-209ENST00000545689 HOXC5Q00444 222 aa11.67□□□□□ -0.54
COL4A6-209ENST00000545689 LTB4RQ15722 352 aa11.67□□□□□ -0.54
COL4A6-209ENST00000545689 GAREM2Q75VX8 874 aa11.67□□□□□ -0.54
COL4A6-209ENST00000545689 C12orf45Q8N5I9 185 aaPredicted RBP11.67□□□□□ -0.54
COL4A6-209ENST00000545689 ZFAND1Q8TCF1 268 aa11.67□□□□□ -0.54
COL4A6-209ENST00000545689 SLC2A12Q8TD20 617 aa11.67□□□□□ -0.54
COL4A6-209ENST00000545689 RNF128Q8TEB7 428 aa11.67□□□□□ -0.54
COL4A6-209ENST00000545689 CUTCQ9NTM9 273 aa11.67□□□□□ -0.54
COL4A6-209ENST00000545689 TXNL4BQ9NX01 149 aaKnown RBP11.67□□□□□ -0.54
COL4A6-209ENST00000545689 TRDV1A0A1B0GX56 115 aa11.67□□□□□ -0.54
COL4A6-209ENST00000545689 SEC14L5O43304 696 aa11.67□□□□□ -0.54
COL4A6-209ENST00000545689 CASP3P42574 277 aa11.67□□□□□ -0.54
COL4A6-209ENST00000545689 TAS2R20P59543 309 aa11.67□□□□□ -0.54
COL4A6-209ENST00000545689 DNAJA3Q96EY1 480 aa11.67□□□□□ -0.54
COL4A6-209ENST00000545689 MFFQ9GZY8 342 aa11.67□□□□□ -0.54
COL4A6-209ENST00000545689 ZBTB32Q9Y2Y4 487 aaPredicted RBP11.67□□□□□ -0.54
COL4A6-209ENST00000545689 MMACHCQ9Y4U1 282 aa11.67□□□□□ -0.54
COL4A6-209ENST00000545689 DCDC2BA2VCK2 349 aa11.67□□□□□ -0.54
COL4A6-209ENST00000545689 SERINC4A6NH21 518 aa11.67□□□□□ -0.54
COL4A6-209ENST00000545689 SCGB2A1O75556 95 aa11.67□□□□□ -0.54
COL4A6-209ENST00000545689 PTHP01270 115 aa11.67□□□□□ -0.54
COL4A6-209ENST00000545689 DCNP07585 359 aaKnown RBP11.67□□□□□ -0.54
COL4A6-209ENST00000545689 BMP1P13497 986 aa11.67□□□□□ -0.54
COL4A6-209ENST00000545689 KIAA1024LP59773 190 aa11.67□□□□□ -0.54
COL4A6-209ENST00000545689 MLC1Q15049 377 aa11.67□□□□□ -0.54
COL4A6-209ENST00000545689 TATDN3Q17R31 274 aa11.67□□□□□ -0.54
COL4A6-209ENST00000545689 CCNJQ5T5M9 372 aa11.67□□□□□ -0.54
COL4A6-209ENST00000545689 DPY19L2P2Q6ZN68 376 aa11.67□□□□□ -0.54
COL4A6-209ENST00000545689 CFAP77Q6ZQR2 320 aa11.67□□□□□ -0.54
COL4A6-209ENST00000545689 OR13C2Q8NGS9 318 aa11.67□□□□□ -0.54
COL4A6-209ENST00000545689 STACQ99469 402 aa11.67□□□□□ -0.54
COL4A6-209ENST00000545689 MACROD1Q9BQ69 325 aa11.67□□□□□ -0.54
COL4A6-209ENST00000545689 RBM24Q9BX46 236 aaKnown RBP11.67□□□□□ -0.54
COL4A6-209ENST00000545689 FZD7O75084 574 aa11.67□□□□□ -0.54
COL4A6-209ENST00000545689 CSO75390 466 aaKnown RBP11.67□□□□□ -0.54
COL4A6-209ENST00000545689 ZFAND5O76080 213 aa11.67□□□□□ -0.54
COL4A6-209ENST00000545689 ZDHHC11BP0C7U3 371 aa11.67□□□□□ -0.54
COL4A6-209ENST00000545689 SSTR4P31391 388 aa11.67□□□□□ -0.54
COL4A6-209ENST00000545689 P2RY14Q15391 338 aa11.67□□□□□ -0.54
COL4A6-209ENST00000545689 KLHDC8BQ8IXV7 354 aa11.67□□□□□ -0.54
COL4A6-209ENST00000545689 MAN2C1Q9NTJ4 1040 aa11.67□□□□□ -0.54
COL4A6-209ENST00000545689 NDUFAF4Q9P032 175 aa11.67□□□□□ -0.54
COL4A6-209ENST00000545689 ATXN7L1Q9ULK2 861 aaPredicted RBP11.67□□□□□ -0.54
COL4A6-209ENST00000545689 HCFC2Q9Y5Z7 792 aa11.67□□□□□ -0.54
COL4A6-209ENST00000545689 SULT1C2O00338 296 aa11.66□□□□□ -0.54
COL4A6-209ENST00000545689 HOXC11O43248 304 aaPredicted RBP11.66□□□□□ -0.54
COL4A6-209ENST00000545689 SLC16A7O60669 478 aa11.66□□□□□ -0.54
COL4A6-209ENST00000545689 SLC35E2P0CK97 266 aa11.66□□□□□ -0.54
COL4A6-209ENST00000545689 SMIM18P0DKX4 95 aa11.66□□□□□ -0.54
COL4A6-209ENST00000545689 NPPBP16860 134 aa11.66□□□□□ -0.54
COL4A6-209ENST00000545689 RPS25P62851 125 aaKnown RBP11.66□□□□□ -0.54
COL4A6-209ENST00000545689 ZNF616Q08AN1 781 aa11.66□□□□□ -0.54
COL4A6-209ENST00000545689 CLVS2Q5SYC1 327 aa11.66□□□□□ -0.54
COL4A6-209ENST00000545689 ABHD17BQ5VST6 288 aa11.66□□□□□ -0.54
COL4A6-209ENST00000545689 NIPAL3Q6P499 406 aa11.66□□□□□ -0.54
COL4A6-209ENST00000545689 VRK3Q8IV63 474 aa11.66□□□□□ -0.54
COL4A6-209ENST00000545689 BEST4Q8NFU0 473 aa11.66□□□□□ -0.54
COL4A6-209ENST00000545689 NAT6Q93015 286 aa11.66□□□□□ -0.54
COL4A6-209ENST00000545689 CDH20Q9HBT6 801 aa11.66□□□□□ -0.54
COL4A6-209ENST00000545689 LYRM4Q9HD34 91 aa11.66□□□□□ -0.54
COL4A6-209ENST00000545689 GLTPQ9NZD2 209 aa11.66□□□□□ -0.54
COL4A6-209ENST00000545689 SLC5A10A0PJK1 596 aa11.66□□□□□ -0.54
COL4A6-209ENST00000545689 GFYI3L273 518 aa11.66□□□□□ -0.54
COL4A6-209ENST00000545689 LCATP04180 440 aa11.66□□□□□ -0.54
COL4A6-209ENST00000545689 ALDOBP05062 364 aa11.66□□□□□ -0.54
COL4A6-209ENST00000545689 GIFP27352 417 aa11.66□□□□□ -0.54
COL4A6-209ENST00000545689 CD38P28907 300 aa11.66□□□□□ -0.54
COL4A6-209ENST00000545689 MZT1Q08AG7 82 aa11.66□□□□□ -0.54
COL4A6-209ENST00000545689 EIF2S3LQ2VIR3 472 aaKnown RBP11.66□□□□□ -0.54
COL4A6-209ENST00000545689 PRR22Q8IZ63 422 aa11.66□□□□□ -0.54
COL4A6-209ENST00000545689 IL22RA1Q8N6P7 574 aa11.66□□□□□ -0.54
COL4A6-209ENST00000545689 CCNL2Q96S94 520 aaPredicted RBP11.66□□□□□ -0.54
COL4A6-209ENST00000545689 TSPAN10Q9H1Z9 355 aaPredicted RBP11.66□□□□□ -0.54
COL4A6-209ENST00000545689 GLIPR2Q9H4G4 154 aa11.66□□□□□ -0.54
COL4A6-209ENST00000545689 STARD5Q9NSY2 213 aa11.66□□□□□ -0.54
COL4A6-209ENST00000545689 PLEKHJ1Q9NW61 149 aa11.66□□□□□ -0.54
COL4A6-209ENST00000545689 CTDSP2O14595 271 aa11.66□□□□□ -0.54
COL4A6-209ENST00000545689 SDC3O75056 442 aa11.66□□□□□ -0.54
COL4A6-209ENST00000545689 SLC43A1O75387 559 aa11.66□□□□□ -0.54
COL4A6-209ENST00000545689 OR8U9P0C7N5 309 aa11.66□□□□□ -0.54
COL4A6-209ENST00000545689 DEFB133Q30KQ1 61 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms