RNA–Protein interactions for RNA: ENST00000545688.5

SNHG1-224, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3

Gene SNHG1, Length 610 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-224ENST00000545688 NEUROG3Q9Y4Z2 214 aa2.71□□□□□ -1.98
SNHG1-224ENST00000545688 TEX15Q9BXT5 2789 aa2.71□□□□□ -1.98
SNHG1-224ENST00000545688 ANKRD17O75179 2603 aaKnown RBP2.71□□□□□ -1.98
SNHG1-224ENST00000545688 TEP1Q99973 2627 aaKnown RBP2.71□□□□□ -1.98
SNHG1-224ENST00000545688 ASCC3Q8N3C0 2202 aaKnown RBP2.7□□□□□ -1.98
SNHG1-224ENST00000545688 RELNP78509 3460 aa2.7□□□□□ -1.98
SNHG1-224ENST00000545688 CCDC171Q6TFL3 1326 aa2.7□□□□□ -1.98
SNHG1-224ENST00000545688 PTPRQQ9UMZ3 2332 aa2.7□□□□□ -1.98
SNHG1-224ENST00000545688 UBR5O95071 2799 aaPredicted RBP2.7□□□□□ -1.98
SNHG1-224ENST00000545688 COL6A6A6NMZ7 2263 aa2.7□□□□□ -1.98
SNHG1-224ENST00000545688 IGKV2D-24A0A075B6R9 120 aa2.7□□□□□ -1.98
SNHG1-224ENST00000545688 A0A1B0GUA9 196 aa2.7□□□□□ -1.98
SNHG1-224ENST00000545688 ABCD4O14678 606 aa2.7□□□□□ -1.98
SNHG1-224ENST00000545688 ARPC1BO15143 372 aaKnown RBP2.7□□□□□ -1.98
SNHG1-224ENST00000545688 GOLGA8HP0CJ92 632 aa2.7□□□□□ -1.98
SNHG1-224ENST00000545688 STK19P49842 368 aaPredicted RBP2.7□□□□□ -1.98
SNHG1-224ENST00000545688 GPC3P51654 580 aa2.7□□□□□ -1.98
SNHG1-224ENST00000545688 CRYBB1P53674 252 aaPredicted RBP2.7□□□□□ -1.98
SNHG1-224ENST00000545688 UBXN1Q04323 297 aa2.7□□□□□ -1.98
SNHG1-224ENST00000545688 SRSF5Q13243 272 aaKnown RBP2.7□□□□□ -1.98
SNHG1-224ENST00000545688 SCARB2Q14108 478 aa2.7□□□□□ -1.98
SNHG1-224ENST00000545688 SF3A2Q15428 464 aaKnown RBP2.7□□□□□ -1.98
SNHG1-224ENST00000545688 USH1GQ495M9 461 aa2.7□□□□□ -1.98
SNHG1-224ENST00000545688 CYB5R2Q6BCY4 276 aa2.7□□□□□ -1.98
SNHG1-224ENST00000545688 B3GLCTQ6Y288 498 aa2.7□□□□□ -1.98
SNHG1-224ENST00000545688 MLKLQ8NB16 471 aa2.7□□□□□ -1.98
SNHG1-224ENST00000545688 ZNF540Q8NDQ6 660 aa2.7□□□□□ -1.98
SNHG1-224ENST00000545688 ZNF397Q8NF99 534 aaPredicted RBP2.7□□□□□ -1.98
SNHG1-224ENST00000545688 RNASE8Q8TDE3 154 aaKnown RBP2.7□□□□□ -1.98
SNHG1-224ENST00000545688 TMEM37Q8WXS4 190 aa2.7□□□□□ -1.98
SNHG1-224ENST00000545688 NOL4LQ96MY1 436 aaPredicted RBP2.7□□□□□ -1.98
SNHG1-224ENST00000545688 MBOAT7Q96N66 472 aa2.7□□□□□ -1.98
SNHG1-224ENST00000545688 NT5C3AQ9H0P0 336 aa2.7□□□□□ -1.98
SNHG1-224ENST00000545688 PRG3Q9Y2Y8 225 aaPredicted RBP2.7□□□□□ -1.98
SNHG1-224ENST00000545688 DHRS7Q9Y394 339 aa2.7□□□□□ -1.98
SNHG1-224ENST00000545688 PPIAL4AQ9Y536 164 aa2.7□□□□□ -1.98
SNHG1-224ENST00000545688 NBPF19A0A087WUL8 3843 aa2.7□□□□□ -1.98
SNHG1-224ENST00000545688 MYH7BA7E2Y1 1941 aa2.7□□□□□ -1.98
SNHG1-224ENST00000545688 DOCK6Q96HP0 2047 aa2.69□□□□□ -1.98
SNHG1-224ENST00000545688 PIEZO2Q9H5I5 2752 aa2.69□□□□□ -1.98
SNHG1-224ENST00000545688 C2orf16Q68DN1 1984 aa2.69□□□□□ -1.98
SNHG1-224ENST00000545688 SMIM30A4D0T7 59 aa2.69□□□□□ -1.98
SNHG1-224ENST00000545688 C5orf51A6NDU8 294 aa2.69□□□□□ -1.98
SNHG1-224ENST00000545688 USP27XA6NNY8 438 aa2.69□□□□□ -1.98
SNHG1-224ENST00000545688 NPIPA2E9PIF3 369 aa2.69□□□□□ -1.98
SNHG1-224ENST00000545688 ZBTB5O15062 677 aa2.69□□□□□ -1.98
SNHG1-224ENST00000545688 SNAI2O43623 268 aa2.69□□□□□ -1.98
SNHG1-224ENST00000545688 ECI2O75521 394 aa2.69□□□□□ -1.98
SNHG1-224ENST00000545688 APRTP07741 180 aa2.69□□□□□ -1.98
SNHG1-224ENST00000545688 ZNF44P15621 663 aa2.69□□□□□ -1.98
SNHG1-224ENST00000545688 FERP16591 822 aa2.69□□□□□ -1.98
SNHG1-224ENST00000545688 CCND2P30279 289 aa2.69□□□□□ -1.98
SNHG1-224ENST00000545688 TCF7P36402 384 aaPredicted RBP2.69□□□□□ -1.98
SNHG1-224ENST00000545688 TDO2P48775 406 aa2.69□□□□□ -1.98
SNHG1-224ENST00000545688 SLC11A1P49279 550 aa2.69□□□□□ -1.98
SNHG1-224ENST00000545688 NOVA1P51513 510 aaKnown RBP2.69□□□□□ -1.98
SNHG1-224ENST00000545688 STX1BP61266 288 aa2.69□□□□□ -1.98
SNHG1-224ENST00000545688 OTUD4Q01804 1114 aaKnown RBP2.69□□□□□ -1.98
SNHG1-224ENST00000545688 RAB35Q15286 201 aa2.69□□□□□ -1.98
SNHG1-224ENST00000545688 EOGTQ5NDL2 527 aa2.69□□□□□ -1.98
SNHG1-224ENST00000545688 METTL11BQ5VVY1 283 aa2.69□□□□□ -1.98
SNHG1-224ENST00000545688 ASPHD2Q6ICH7 369 aa2.69□□□□□ -1.98
SNHG1-224ENST00000545688 DPY19L2P2Q6ZN68 376 aa2.69□□□□□ -1.98
SNHG1-224ENST00000545688 ZNF786Q8N393 782 aa2.69□□□□□ -1.98
SNHG1-224ENST00000545688 TPRX1Q8N7U7 411 aa2.69□□□□□ -1.98
SNHG1-224ENST00000545688 DCUN1D4Q92564 292 aa2.69□□□□□ -1.98
SNHG1-224ENST00000545688 FGF13Q92913 245 aa2.69□□□□□ -1.98
SNHG1-224ENST00000545688 NEIL2Q969S2 332 aa2.69□□□□□ -1.98
SNHG1-224ENST00000545688 SMIM14Q96QK8 99 aa2.69□□□□□ -1.98
SNHG1-224ENST00000545688 PLA2G2FQ9BZM2 168 aa2.69□□□□□ -1.98
SNHG1-224ENST00000545688 NTN4Q9HB63 628 aa2.69□□□□□ -1.98
SNHG1-224ENST00000545688 MARCH5Q9NX47 278 aa2.69□□□□□ -1.98
SNHG1-224ENST00000545688 MBD2Q9UBB5 411 aa2.69□□□□□ -1.98
SNHG1-224ENST00000545688 ONECUT1Q9UBC0 465 aa2.69□□□□□ -1.98
SNHG1-224ENST00000545688 MIOXQ9UGB7 285 aa2.69□□□□□ -1.98
SNHG1-224ENST00000545688 MAD2L2Q9UI95 211 aa2.69□□□□□ -1.98
SNHG1-224ENST00000545688 RAB23Q9ULC3 237 aa2.69□□□□□ -1.98
SNHG1-224ENST00000545688 UBIAD1Q9Y5Z9 338 aa2.69□□□□□ -1.98
SNHG1-224ENST00000545688 WSB1Q9Y6I7 421 aa2.69□□□□□ -1.98
SNHG1-224ENST00000545688 KNTC1P50748 2209 aa2.69□□□□□ -1.98
SNHG1-224ENST00000545688 MYO9AB2RTY4 2548 aa2.69□□□□□ -1.98
SNHG1-224ENST00000545688 ZMYM6O95789 1325 aa2.68□□□□□ -1.98
SNHG1-224ENST00000545688 ABCA12Q86UK0 2595 aa2.68□□□□□ -1.98
SNHG1-224ENST00000545688 LAMA4Q16363 1823 aa2.68□□□□□ -1.98
SNHG1-224ENST00000545688 GREB1Q4ZG55 1949 aa2.68□□□□□ -1.98
SNHG1-224ENST00000545688 A0A1W2PQ67 120 aa2.68□□□□□ -1.98
SNHG1-224ENST00000545688 DHRS7CA6NNS2 312 aa2.68□□□□□ -1.98
SNHG1-224ENST00000545688 ANKRD63C9JTQ0 380 aa2.68□□□□□ -1.98
SNHG1-224ENST00000545688 KRTAP4-16G5E9R7 235 aaPredicted RBP2.68□□□□□ -1.98
SNHG1-224ENST00000545688 CYTH3O43739 400 aa2.68□□□□□ -1.98
SNHG1-224ENST00000545688 TBL1XO60907 577 aa2.68□□□□□ -1.98
SNHG1-224ENST00000545688 AKAP3O75969 853 aa2.68□□□□□ -1.98
SNHG1-224ENST00000545688 POLR2MP0CAP2 368 aa2.68□□□□□ -1.98
SNHG1-224ENST00000545688 HOXA9P31269 272 aa2.68□□□□□ -1.98
SNHG1-224ENST00000545688 CXCL12P48061 93 aa2.68□□□□□ -1.98
SNHG1-224ENST00000545688 NLRP11P59045 1033 aaKnown RBP2.68□□□□□ -1.98
SNHG1-224ENST00000545688 OC90Q02509 493 aaPredicted RBP2.68□□□□□ -1.98
SNHG1-224ENST00000545688 EGFEM1PQ0D2K5 195 aa2.68□□□□□ -1.98
SNHG1-224ENST00000545688 KCTD19Q17RG1 926 aaPredicted RBP2.68□□□□□ -1.98
SNHG1-224ENST00000545688 ZNF699Q32M78 642 aa2.68□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms