RNA–Protein interactions for RNA: ENST00000545663.5

CLSTN3-216, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-216ENST00000545663 CALCRP30988 508 aa13.26□□□□□ -0.29
CLSTN3-216ENST00000545663 MPIP34949 423 aa13.26□□□□□ -0.29
CLSTN3-216ENST00000545663 PRPS1P60891 318 aa13.26□□□□□ -0.29
CLSTN3-216ENST00000545663 NAA20P61599 178 aa13.26□□□□□ -0.29
CLSTN3-216ENST00000545663 MYBPC1Q00872 1141 aa13.26□□□□□ -0.29
CLSTN3-216ENST00000545663 ZNF117Q03924 483 aa13.26□□□□□ -0.29
CLSTN3-216ENST00000545663 HGFACQ04756 655 aa13.26□□□□□ -0.29
CLSTN3-216ENST00000545663 BAMBIQ13145 260 aa13.26□□□□□ -0.29
CLSTN3-216ENST00000545663 DOK3Q7L591 496 aa13.26□□□□□ -0.29
CLSTN3-216ENST00000545663 KIR3DL3Q8N743 410 aa13.26□□□□□ -0.29
CLSTN3-216ENST00000545663 GPR151Q8TDV0 419 aa13.26□□□□□ -0.29
CLSTN3-216ENST00000545663 WFDC12Q8WWY7 111 aa13.26□□□□□ -0.29
CLSTN3-216ENST00000545663 TMIGD2Q96BF3 282 aa13.26□□□□□ -0.29
CLSTN3-216ENST00000545663 ZNF48Q96MX3 618 aaPredicted RBP13.26□□□□□ -0.29
CLSTN3-216ENST00000545663 SLC38A2Q96QD8 506 aa13.26□□□□□ -0.29
CLSTN3-216ENST00000545663 BBS4Q96RK4 519 aa13.26□□□□□ -0.29
CLSTN3-216ENST00000545663 RBM4BQ9BQ04 359 aaKnown RBP13.26□□□□□ -0.29
CLSTN3-216ENST00000545663 SSU72Q9NP77 194 aaKnown RBP13.26□□□□□ -0.29
CLSTN3-216ENST00000545663 DYNLRB1Q9NP97 96 aa13.26□□□□□ -0.29
CLSTN3-216ENST00000545663 A0A087WV62 115 aa13.25□□□□□ -0.29
CLSTN3-216ENST00000545663 A0A0G2JMP0 313 aa13.25□□□□□ -0.29
CLSTN3-216ENST00000545663 A0A0X1KG70 313 aa13.25□□□□□ -0.29
CLSTN3-216ENST00000545663 ATP8B1O43520 1251 aa13.25□□□□□ -0.29
CLSTN3-216ENST00000545663 NUDT14O95848 222 aa13.25□□□□□ -0.29
CLSTN3-216ENST00000545663 PDYNP01213 254 aa13.25□□□□□ -0.29
CLSTN3-216ENST00000545663 HPXP02790 462 aa13.25□□□□□ -0.29
CLSTN3-216ENST00000545663 RNASE1P07998 156 aaKnown RBP13.25□□□□□ -0.29
CLSTN3-216ENST00000545663 GFAPP14136 432 aa13.25□□□□□ -0.29
CLSTN3-216ENST00000545663 PRKCAP17252 672 aa13.25□□□□□ -0.29
CLSTN3-216ENST00000545663 TCN1P20061 433 aaPredicted RBP13.25□□□□□ -0.29
CLSTN3-216ENST00000545663 PCGF2P35227 344 aa13.25□□□□□ -0.29
CLSTN3-216ENST00000545663 KRTAP10-3P60369 221 aa13.25□□□□□ -0.29
CLSTN3-216ENST00000545663 TRA2BP62995 288 aaKnown RBP13.25□□□□□ -0.29
CLSTN3-216ENST00000545663 IFT88Q13099 833 aa13.25□□□□□ -0.29
CLSTN3-216ENST00000545663 ZNHIT3Q15649 155 aaPredicted RBP13.25□□□□□ -0.29
CLSTN3-216ENST00000545663 IKBIPQ70UQ0 350 aa13.25□□□□□ -0.29
CLSTN3-216ENST00000545663 LSRQ86X29 649 aaPredicted RBP13.25□□□□□ -0.29
CLSTN3-216ENST00000545663 HOMEZQ8IX15 550 aa13.25□□□□□ -0.29
CLSTN3-216ENST00000545663 C17orf78Q8N4C9 275 aa13.25□□□□□ -0.29
CLSTN3-216ENST00000545663 SYT14Q8NB59 555 aa13.25□□□□□ -0.29
CLSTN3-216ENST00000545663 OR4M2Q8NGB6 313 aa13.25□□□□□ -0.29
CLSTN3-216ENST00000545663 YIPF5Q969M3 257 aa13.25□□□□□ -0.29
CLSTN3-216ENST00000545663 UBE2FQ969M7 185 aa13.25□□□□□ -0.29
CLSTN3-216ENST00000545663 ATP6V1E2Q96A05 226 aa13.25□□□□□ -0.29
CLSTN3-216ENST00000545663 KCNS3Q9BQ31 491 aa13.25□□□□□ -0.29
CLSTN3-216ENST00000545663 CENPHQ9H3R5 247 aa13.25□□□□□ -0.29
CLSTN3-216ENST00000545663 C7orf69Q9H7B7 122 aa13.25□□□□□ -0.29
CLSTN3-216ENST00000545663 EQTNQ9NQ60 294 aa13.25□□□□□ -0.29
CLSTN3-216ENST00000545663 SLC7A10Q9NS82 523 aa13.25□□□□□ -0.29
CLSTN3-216ENST00000545663 EMC3Q9P0I2 261 aa13.25□□□□□ -0.29
CLSTN3-216ENST00000545663 LOC100653049A0A140TA62 436 aa13.24□□□□□ -0.29
CLSTN3-216ENST00000545663 MYO1GB0I1T2 1018 aa13.24□□□□□ -0.29
CLSTN3-216ENST00000545663 PPIHO43447 177 aaKnown RBP13.24□□□□□ -0.29
CLSTN3-216ENST00000545663 MRPL33O75394 65 aaKnown RBP13.24□□□□□ -0.29
CLSTN3-216ENST00000545663 KRT34O76011 436 aa13.24□□□□□ -0.29
CLSTN3-216ENST00000545663 CRYAAP02489 173 aa13.24□□□□□ -0.29
CLSTN3-216ENST00000545663 NGFRP08138 427 aa13.24□□□□□ -0.29
CLSTN3-216ENST00000545663 NPR2P20594 1047 aa13.24□□□□□ -0.29
CLSTN3-216ENST00000545663 NCBP2P52298 156 aaKnown RBP eCLIP13.24□□□□□ -0.29
CLSTN3-216ENST00000545663 ALDH18A1P54886 795 aaKnown RBP13.24□□□□□ -0.29
CLSTN3-216ENST00000545663 NAAAQ02083 359 aa13.24□□□□□ -0.29
CLSTN3-216ENST00000545663 NDUFAF6Q330K2 333 aa13.24□□□□□ -0.29
CLSTN3-216ENST00000545663 TECRLQ5HYJ1 363 aa13.24□□□□□ -0.29
CLSTN3-216ENST00000545663 ZNF311Q5JNZ3 666 aa13.24□□□□□ -0.29
CLSTN3-216ENST00000545663 DCAF12L2Q5VW00 463 aa13.24□□□□□ -0.29
CLSTN3-216ENST00000545663 ABLIM2Q6H8Q1 611 aa13.24□□□□□ -0.29
CLSTN3-216ENST00000545663 ASPHD2Q6ICH7 369 aa13.24□□□□□ -0.29
CLSTN3-216ENST00000545663 ACSM5Q6NUN0 579 aa13.24□□□□□ -0.29
CLSTN3-216ENST00000545663 ANKRD16Q6P6B7 361 aa13.24□□□□□ -0.29
CLSTN3-216ENST00000545663 SLC22A9Q8IVM8 553 aa13.24□□□□□ -0.29
CLSTN3-216ENST00000545663 OR2L13Q8N349 312 aa13.24□□□□□ -0.29
CLSTN3-216ENST00000545663 CEP70Q8NHQ1 597 aa13.24□□□□□ -0.29
CLSTN3-216ENST00000545663 FBXO30Q8TB52 745 aa13.24□□□□□ -0.29
CLSTN3-216ENST00000545663 CKAP2Q8WWK9 683 aa13.24□□□□□ -0.29
CLSTN3-216ENST00000545663 DNAJA3Q96EY1 480 aa13.24□□□□□ -0.29
CLSTN3-216ENST00000545663 APOPT1Q96IL0 206 aa13.24□□□□□ -0.29
CLSTN3-216ENST00000545663 GPR78Q96P69 363 aa13.24□□□□□ -0.29
CLSTN3-216ENST00000545663 CITED1Q99966 193 aa13.24□□□□□ -0.29
CLSTN3-216ENST00000545663 KATNB1Q9BVA0 655 aa13.24□□□□□ -0.29
CLSTN3-216ENST00000545663 ZNF275Q9NSD4 429 aaPredicted RBP13.24□□□□□ -0.29
CLSTN3-216ENST00000545663 GIMAP4Q9NUV9 329 aa13.24□□□□□ -0.29
CLSTN3-216ENST00000545663 DDX18Q9NVP1 670 aaKnown RBP13.24□□□□□ -0.29
CLSTN3-216ENST00000545663 ZNF69Q9UC07 566 aa13.24□□□□□ -0.29
CLSTN3-216ENST00000545663 A0A1W2PPM1 405 aa13.23□□□□□ -0.29
CLSTN3-216ENST00000545663 STX16-NPEPL1H3BU86 382 aa13.23□□□□□ -0.29
CLSTN3-216ENST00000545663 STX16O14662 325 aa13.23□□□□□ -0.29
CLSTN3-216ENST00000545663 TSPAN15O95858 294 aa13.23□□□□□ -0.29
CLSTN3-216ENST00000545663 WNT11O96014 354 aa13.23□□□□□ -0.29
CLSTN3-216ENST00000545663 KNG1P01042 644 aa13.23□□□□□ -0.29
CLSTN3-216ENST00000545663 DIO1P49895 249 aa13.23□□□□□ -0.29
CLSTN3-216ENST00000545663 RAE1P78406 368 aaKnown RBP13.23□□□□□ -0.29
CLSTN3-216ENST00000545663 TRAF3Q13114 568 aa13.23□□□□□ -0.29
CLSTN3-216ENST00000545663 SLC9A3R2Q15599 337 aa13.23□□□□□ -0.29
CLSTN3-216ENST00000545663 TNFAIP8L3Q5GJ75 292 aa13.23□□□□□ -0.29
CLSTN3-216ENST00000545663 VAX1Q5SQQ9 334 aa13.23□□□□□ -0.29
CLSTN3-216ENST00000545663 GALNT18Q6P9A2 607 aa13.23□□□□□ -0.29
CLSTN3-216ENST00000545663 C17orf107Q6ZR85 190 aa13.23□□□□□ -0.29
CLSTN3-216ENST00000545663 SAMD14Q8IZD0 417 aaPredicted RBP13.23□□□□□ -0.29
CLSTN3-216ENST00000545663 C1orf162Q8NEQ5 155 aaPredicted RBP13.23□□□□□ -0.29
CLSTN3-216ENST00000545663 GPR119Q8TDV5 335 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms