RNA–Protein interactions for RNA: ENST00000543356.6

GNE-206, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 1 (best) BASIC

Gene GNE, Length 2,576 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-206ENST00000543356 ZNF12P17014 697 aa8.52□□□□□ -1.05
GNE-206ENST00000543356 ZNF16P17020 682 aaPredicted RBP8.52□□□□□ -1.05
GNE-206ENST00000543356 CD53P19397 219 aa8.52□□□□□ -1.05
GNE-206ENST00000543356 NBL1P41271 181 aa8.52□□□□□ -1.05
GNE-206ENST00000543356 MVKQ03426 396 aa8.52□□□□□ -1.05
GNE-206ENST00000543356 PIGFQ07326 219 aa8.52□□□□□ -1.05
GNE-206ENST00000543356 PMS2P3Q13401 168 aa8.52□□□□□ -1.05
GNE-206ENST00000543356 NEDD8Q15843 81 aa8.52□□□□□ -1.05
GNE-206ENST00000543356 PGGHGQ32M88 737 aa8.52□□□□□ -1.05
GNE-206ENST00000543356 FAM69BQ5VUD6 431 aa8.52□□□□□ -1.05
GNE-206ENST00000543356 MEDAGQ5VYS4 303 aa8.52□□□□□ -1.05
GNE-206ENST00000543356 PLAG1Q6DJT9 500 aa8.52□□□□□ -1.05
GNE-206ENST00000543356 DHRS13Q6UX07 377 aa8.52□□□□□ -1.05
GNE-206ENST00000543356 LYPD8Q6UX82 237 aa8.52□□□□□ -1.05
GNE-206ENST00000543356 AHSA2Q719I0 299 aa8.52□□□□□ -1.05
GNE-206ENST00000543356 NUP54Q7Z3B4 507 aa8.52□□□□□ -1.05
GNE-206ENST00000543356 MARCH3Q86UD3 253 aa8.52□□□□□ -1.05
GNE-206ENST00000543356 CLVS1Q8IUQ0 354 aaPredicted RBP8.52□□□□□ -1.05
GNE-206ENST00000543356 FAM26EQ8N5C1 309 aa8.52□□□□□ -1.05
GNE-206ENST00000543356 AMER2Q8N7J2 671 aa8.52□□□□□ -1.05
GNE-206ENST00000543356 CHPT1Q8WUD6 406 aa8.52□□□□□ -1.05
GNE-206ENST00000543356 CT55Q8WUE5 264 aa8.52□□□□□ -1.05
GNE-206ENST00000543356 TTC9Q92623 222 aa8.52□□□□□ -1.05
GNE-206ENST00000543356 MUL1Q969V5 352 aa8.52□□□□□ -1.05
GNE-206ENST00000543356 TMIGD2Q96BF3 282 aa8.52□□□□□ -1.05
GNE-206ENST00000543356 TMCO6Q96DC7 493 aa8.52□□□□□ -1.05
GNE-206ENST00000543356 PLEKHA8Q96JA3 519 aa8.52□□□□□ -1.05
GNE-206ENST00000543356 SLC38A2Q96QD8 506 aa8.52□□□□□ -1.05
GNE-206ENST00000543356 RHNO1Q9BSD3 238 aa8.52□□□□□ -1.05
GNE-206ENST00000543356 TMEM43Q9BTV4 400 aa8.52□□□□□ -1.05
GNE-206ENST00000543356 TSSK6Q9BXA6 273 aa8.52□□□□□ -1.05
GNE-206ENST00000543356 MMP25Q9NPA2 562 aa8.52□□□□□ -1.05
GNE-206ENST00000543356 ATP13A2Q9NQ11 1180 aa8.52□□□□□ -1.05
GNE-206ENST00000543356 MED17Q9NVC6 651 aa8.52□□□□□ -1.05
GNE-206ENST00000543356 TVP23BQ9NYZ1 205 aa8.52□□□□□ -1.05
GNE-206ENST00000543356 MYOTQ9UBF9 498 aa8.52□□□□□ -1.05
GNE-206ENST00000543356 CRNNQ9UBG3 495 aaPredicted RBP8.52□□□□□ -1.05
GNE-206ENST00000543356 FRYLO94915 3013 aa8.52□□□□□ -1.05
GNE-206ENST00000543356 EFCAB10A6NFE3 127 aa8.52□□□□□ -1.05
GNE-206ENST00000543356 WWP2O00308 870 aa8.52□□□□□ -1.05
GNE-206ENST00000543356 PRKYO43930 277 aa8.52□□□□□ -1.05
GNE-206ENST00000543356 HCN1O60741 890 aa8.52□□□□□ -1.05
GNE-206ENST00000543356 ZNF354AO60765 605 aaPredicted RBP8.52□□□□□ -1.05
GNE-206ENST00000543356 RCBTB2O95199 551 aa8.52□□□□□ -1.05
GNE-206ENST00000543356 CRYZL1O95825 349 aa8.52□□□□□ -1.05
GNE-206ENST00000543356 MT-ND2P03891 347 aa8.52□□□□□ -1.05
GNE-206ENST00000543356 CDK1P06493 297 aa8.52□□□□□ -1.05
GNE-206ENST00000543356 PTNP21246 168 aa8.52□□□□□ -1.05
GNE-206ENST00000543356 NR4A1P22736 598 aa8.52□□□□□ -1.05
GNE-206ENST00000543356 S100A5P33763 92 aa8.52□□□□□ -1.05
GNE-206ENST00000543356 SLC15A1P46059 708 aa8.52□□□□□ -1.05
GNE-206ENST00000543356 CCR4P51679 360 aa8.52□□□□□ -1.05
GNE-206ENST00000543356 TUBA3CQ13748 450 aa8.52□□□□□ -1.05
GNE-206ENST00000543356 CBFBQ13951 182 aa8.52□□□□□ -1.05
GNE-206ENST00000543356 RAB39AQ14964 217 aa8.52□□□□□ -1.05
GNE-206ENST00000543356 BTBD16Q32M84 506 aa8.52□□□□□ -1.05
GNE-206ENST00000543356 CDONQ4KMG0 1287 aa8.52□□□□□ -1.05
GNE-206ENST00000543356 STPG1Q5TH74 334 aa8.52□□□□□ -1.05
GNE-206ENST00000543356 TMEM164Q5U3C3 297 aa8.52□□□□□ -1.05
GNE-206ENST00000543356 GTF2IRD2BQ6EKJ0 949 aa8.52□□□□□ -1.05
GNE-206ENST00000543356 C16orf47Q6ZP98 133 aaPredicted RBP8.52□□□□□ -1.05
GNE-206ENST00000543356 TIPARPQ7Z3E1 657 aaKnown RBP8.52□□□□□ -1.05
GNE-206ENST00000543356 GTF2IRD2Q86UP8 949 aa8.52□□□□□ -1.05
GNE-206ENST00000543356 TCEANCQ8N8B7 351 aa8.52□□□□□ -1.05
GNE-206ENST00000543356 OR2T33Q8NG76 320 aa8.52□□□□□ -1.05
GNE-206ENST00000543356 OR13F1Q8NGS4 319 aa8.52□□□□□ -1.05
GNE-206ENST00000543356 OR4Q3Q8NH05 313 aa8.52□□□□□ -1.05
GNE-206ENST00000543356 OR5W2Q8NH69 310 aa8.52□□□□□ -1.05
GNE-206ENST00000543356 TMEM163Q8TC26 289 aa8.52□□□□□ -1.05
GNE-206ENST00000543356 GGHQ92820 318 aa8.52□□□□□ -1.05
GNE-206ENST00000543356 IL4I1Q96RQ9 567 aa8.52□□□□□ -1.05
GNE-206ENST00000543356 COPS4Q9BT78 406 aa8.52□□□□□ -1.05
GNE-206ENST00000543356 DEFB126Q9BYW3 111 aa8.52□□□□□ -1.05
GNE-206ENST00000543356 CCDC90BQ9GZT6 254 aa8.52□□□□□ -1.05
GNE-206ENST00000543356 OR52D1Q9H346 318 aa8.52□□□□□ -1.05
GNE-206ENST00000543356 ZBTB20Q9HC78 741 aaPredicted RBP8.52□□□□□ -1.05
GNE-206ENST00000543356 HCRTR2O43614 444 aa8.51□□□□□ -1.05
GNE-206ENST00000543356 ENTPD6O75354 484 aa8.51□□□□□ -1.05
GNE-206ENST00000543356 B3GALNT1O75752 331 aa8.51□□□□□ -1.05
GNE-206ENST00000543356 SEC14L2O76054 403 aa8.51□□□□□ -1.05
GNE-206ENST00000543356 FBXO45P0C2W1 286 aa8.51□□□□□ -1.05
GNE-206ENST00000543356 PGCP20142 388 aa8.51□□□□□ -1.05
GNE-206ENST00000543356 MST1P26927 711 aa8.51□□□□□ -1.05
GNE-206ENST00000543356 GRK5P34947 590 aa8.51□□□□□ -1.05
GNE-206ENST00000543356 SLC1A3P43003 542 aa8.51□□□□□ -1.05
GNE-206ENST00000543356 SLC9A3P48764 834 aa8.51□□□□□ -1.05
GNE-206ENST00000543356 P2RX1P51575 399 aa8.51□□□□□ -1.05
GNE-206ENST00000543356 NUDT6P53370 316 aa8.51□□□□□ -1.05
GNE-206ENST00000543356 FBXW4P57775 412 aa8.51□□□□□ -1.05
GNE-206ENST00000543356 FXYD6P3P58550 94 aa8.51□□□□□ -1.05
GNE-206ENST00000543356 NDUFAF7Q7L592 441 aa8.51□□□□□ -1.05
GNE-206ENST00000543356 DTX3Q8N9I9 347 aa8.51□□□□□ -1.05
GNE-206ENST00000543356 OR11G2Q8NGC1 345 aa8.51□□□□□ -1.05
GNE-206ENST00000543356 OR52L1Q8NGH7 329 aa8.51□□□□□ -1.05
GNE-206ENST00000543356 OR13C2Q8NGS9 318 aa8.51□□□□□ -1.05
GNE-206ENST00000543356 LILRB1Q8NHL6 650 aaPredicted RBP8.51□□□□□ -1.05
GNE-206ENST00000543356 THAP3Q8WTV1 239 aaPredicted RBP8.51□□□□□ -1.05
GNE-206ENST00000543356 SGTBQ96EQ0 304 aa8.51□□□□□ -1.05
GNE-206ENST00000543356 SAMD8Q96LT4 415 aa8.51□□□□□ -1.05
GNE-206ENST00000543356 ADAM19Q9H013 955 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms