RNA–Protein interactions for RNA: ENST00000543115.5

PTPN6-220, Transcript of protein tyrosine phosphatase, non-receptor type 6, humanhuman

TSL 4

Gene PTPN6, Length 650 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6-220ENST00000543115 ADGRG3Q86Y34 549 aa10.65□□□□□ -0.7
PTPN6-220ENST00000543115 LRRC34Q8IZ02 419 aa10.65□□□□□ -0.7
PTPN6-220ENST00000543115 SMAP2Q8WU79 429 aaPredicted RBP10.65□□□□□ -0.7
PTPN6-220ENST00000543115 SLC25A43Q8WUT9 341 aaPredicted RBP10.65□□□□□ -0.7
PTPN6-220ENST00000543115 OIT3Q8WWZ8 545 aa10.65□□□□□ -0.7
PTPN6-220ENST00000543115 PAIP2Q9BPZ3 127 aaKnown RBP10.65□□□□□ -0.7
PTPN6-220ENST00000543115 TRIM2Q9C040 744 aa10.65□□□□□ -0.7
PTPN6-220ENST00000543115 WDR55Q9H6Y2 383 aaPredicted RBP10.65□□□□□ -0.7
PTPN6-220ENST00000543115 NGBQ9NPG2 151 aa10.65□□□□□ -0.7
PTPN6-220ENST00000543115 EXOSC3Q9NQT5 275 aaKnown RBP10.65□□□□□ -0.7
PTPN6-220ENST00000543115 CHRNA9Q9UGM1 479 aa10.65□□□□□ -0.7
PTPN6-220ENST00000543115 BTNL2Q9UIR0 455 aa10.65□□□□□ -0.7
PTPN6-220ENST00000543115 RAB21Q9UL25 225 aa10.65□□□□□ -0.7
PTPN6-220ENST00000543115 NUP214P35658 2090 aaPredicted RBP10.65□□□□□ -0.7
PTPN6-220ENST00000543115 DSCAMO60469 2012 aa10.65□□□□□ -0.71
PTPN6-220ENST00000543115 GOLGA8QA0A0J9YX86 632 aa10.64□□□□□ -0.71
PTPN6-220ENST00000543115 GOLGA8OA6NCC3 632 aa10.64□□□□□ -0.71
PTPN6-220ENST00000543115 CCDC154A6NI56 674 aa10.64□□□□□ -0.71
PTPN6-220ENST00000543115 SHISA9B4DS77 424 aa10.64□□□□□ -0.71
PTPN6-220ENST00000543115 GOLGA8NF8WBI6 632 aa10.64□□□□□ -0.71
PTPN6-220ENST00000543115 NDUFS7O75251 213 aa10.64□□□□□ -0.71
PTPN6-220ENST00000543115 PGM3O95394 542 aa10.64□□□□□ -0.71
PTPN6-220ENST00000543115 PMS2P2O95744 297 aa10.64□□□□□ -0.71
PTPN6-220ENST00000543115 GSNP06396 782 aa10.64□□□□□ -0.71
PTPN6-220ENST00000543115 EPHA3P29320 983 aa10.64□□□□□ -0.71
PTPN6-220ENST00000543115 IDH2P48735 452 aaKnown RBP10.64□□□□□ -0.71
PTPN6-220ENST00000543115 FOXG1P55316 489 aaPredicted RBP10.64□□□□□ -0.71
PTPN6-220ENST00000543115 WDR4P57081 412 aaKnown RBP10.64□□□□□ -0.71
PTPN6-220ENST00000543115 FAPQ12884 760 aa10.64□□□□□ -0.71
PTPN6-220ENST00000543115 PDK3Q15120 406 aa10.64□□□□□ -0.71
PTPN6-220ENST00000543115 PPA1Q15181 289 aa10.64□□□□□ -0.71
PTPN6-220ENST00000543115 MAPK11Q15759 364 aa10.64□□□□□ -0.71
PTPN6-220ENST00000543115 COX20Q5RI15 118 aa10.64□□□□□ -0.71
PTPN6-220ENST00000543115 CCDC103Q8IW40 242 aa10.64□□□□□ -0.71
PTPN6-220ENST00000543115 ZNF100Q8IYN0 542 aa10.64□□□□□ -0.71
PTPN6-220ENST00000543115 ARFGAP2Q8N6H7 521 aa10.64□□□□□ -0.71
PTPN6-220ENST00000543115 ZNF433Q8N7K0 673 aaPredicted RBP10.64□□□□□ -0.71
PTPN6-220ENST00000543115 ANKRD42Q8N9B4 389 aa10.64□□□□□ -0.71
PTPN6-220ENST00000543115 MAPK1IP1LQ8NDC0 245 aa10.64□□□□□ -0.71
PTPN6-220ENST00000543115 PNPT1Q8TCS8 783 aaKnown RBP10.64□□□□□ -0.71
PTPN6-220ENST00000543115 PANX1Q96RD7 426 aa10.64□□□□□ -0.71
PTPN6-220ENST00000543115 USB1Q9BQ65 265 aaKnown RBP10.64□□□□□ -0.71
PTPN6-220ENST00000543115 ST6GALNAC1Q9NSC7 600 aaPredicted RBP10.64□□□□□ -0.71
PTPN6-220ENST00000543115 SLC6A13Q9NSD5 602 aa10.64□□□□□ -0.71
PTPN6-220ENST00000543115 LIPT1Q9Y234 373 aa10.64□□□□□ -0.71
PTPN6-220ENST00000543115 NOSIPQ9Y314 301 aaKnown RBP10.64□□□□□ -0.71
PTPN6-220ENST00000543115 GPR45Q9Y5Y3 372 aa10.64□□□□□ -0.71
PTPN6-220ENST00000543115 SPIN1Q9Y657 262 aaPredicted RBP10.64□□□□□ -0.71
PTPN6-220ENST00000543115 A0A1W2PP18 115 aa10.63□□□□□ -0.71
PTPN6-220ENST00000543115 TMEM72A0PK05 275 aa10.63□□□□□ -0.71
PTPN6-220ENST00000543115 AGAP5A6NIR3 686 aa10.63□□□□□ -0.71
PTPN6-220ENST00000543115 OR5H1A6NKK0 313 aa10.63□□□□□ -0.71
PTPN6-220ENST00000543115 RAD51DO75771 328 aa10.63□□□□□ -0.71
PTPN6-220ENST00000543115 CD8AP01732 235 aa10.63□□□□□ -0.71
PTPN6-220ENST00000543115 PGRP06401 933 aa10.63□□□□□ -0.71
PTPN6-220ENST00000543115 THBS1P07996 1170 aa10.63□□□□□ -0.71
PTPN6-220ENST00000543115 IMPDH2P12268 514 aa10.63□□□□□ -0.71
PTPN6-220ENST00000543115 GGT1P19440 569 aa10.63□□□□□ -0.71
PTPN6-220ENST00000543115 PTNP21246 168 aa10.63□□□□□ -0.71
PTPN6-220ENST00000543115 RPS4Y1P22090 263 aaKnown RBP10.63□□□□□ -0.71
PTPN6-220ENST00000543115 HPCAP84074 193 aa10.63□□□□□ -0.71
PTPN6-220ENST00000543115 CLEC12BQ2HXU8 276 aa10.63□□□□□ -0.71
PTPN6-220ENST00000543115 TIMM23BQ5SRD1 257 aa10.63□□□□□ -0.71
PTPN6-220ENST00000543115 FBXW9Q5XUX1 488 aa10.63□□□□□ -0.71
PTPN6-220ENST00000543115 DNAJC14Q6Y2X3 702 aaPredicted RBP10.63□□□□□ -0.71
PTPN6-220ENST00000543115 ZNF621Q6ZSS3 439 aa10.63□□□□□ -0.71
PTPN6-220ENST00000543115 KIRREL3Q8IZU9 778 aa10.63□□□□□ -0.71
PTPN6-220ENST00000543115 TRNT1Q96Q11 434 aaKnown RBP10.63□□□□□ -0.71
PTPN6-220ENST00000543115 OR52E6Q96RD3 313 aa10.63□□□□□ -0.71
PTPN6-220ENST00000543115 TRAF4Q9BUZ4 470 aaPredicted RBP10.63□□□□□ -0.71
PTPN6-220ENST00000543115 CISD1Q9NZ45 108 aaKnown RBP10.63□□□□□ -0.71
PTPN6-220ENST00000543115 EMC3Q9P0I2 261 aa10.63□□□□□ -0.71
PTPN6-220ENST00000543115 OSGIN1Q9UJX0 560 aa10.63□□□□□ -0.71
PTPN6-220ENST00000543115 HDGFL3Q9Y3E1 203 aa10.63□□□□□ -0.71
PTPN6-220ENST00000543115 FN1P02751 2386 aaKnown RBP10.63□□□□□ -0.71
PTPN6-220ENST00000543115 PRR14LQ5THK1 2151 aa10.62□□□□□ -0.71
PTPN6-220ENST00000543115 TMED7-TICAM2A0A0A6YYA0 188 aa10.62□□□□□ -0.71
PTPN6-220ENST00000543115 A0A1W2PR80 420 aa10.62□□□□□ -0.71
PTPN6-220ENST00000543115 TMEM120BA0PK00 339 aa10.62□□□□□ -0.71
PTPN6-220ENST00000543115 ZC3H12DA2A288 527 aaKnown RBP10.62□□□□□ -0.71
PTPN6-220ENST00000543115 KIAA1324LA8MWY0 1029 aaPredicted RBP10.62□□□□□ -0.71
PTPN6-220ENST00000543115 RNF223E7ERA6 249 aa10.62□□□□□ -0.71
PTPN6-220ENST00000543115 ABCD4O14678 606 aa10.62□□□□□ -0.71
PTPN6-220ENST00000543115 HDAC3O15379 428 aa10.62□□□□□ -0.71
PTPN6-220ENST00000543115 SNNO75324 88 aaPredicted RBP10.62□□□□□ -0.71
PTPN6-220ENST00000543115 IGHV4-39P01824 125 aa10.62□□□□□ -0.71
PTPN6-220ENST00000543115 KITP10721 976 aa10.62□□□□□ -0.71
PTPN6-220ENST00000543115 TACR3P29371 465 aa10.62□□□□□ -0.71
PTPN6-220ENST00000543115 ACVR1BP36896 505 aa10.62□□□□□ -0.71
PTPN6-220ENST00000543115 MVDP53602 400 aa10.62□□□□□ -0.71
PTPN6-220ENST00000543115 SLC16A1P53985 500 aa10.62□□□□□ -0.71
PTPN6-220ENST00000543115 OR2B6P58173 313 aa10.62□□□□□ -0.71
PTPN6-220ENST00000543115 H3F3AP84243 136 aa10.62□□□□□ -0.71
PTPN6-220ENST00000543115 SPOCK1Q08629 439 aa10.62□□□□□ -0.71
PTPN6-220ENST00000543115 VEZF1Q14119 521 aa10.62□□□□□ -0.71
PTPN6-220ENST00000543115 MRPL2Q5T653 305 aaKnown RBP10.62□□□□□ -0.71
PTPN6-220ENST00000543115 LRRC74BQ6ZQY2 392 aa10.62□□□□□ -0.71
PTPN6-220ENST00000543115 SPATA19Q7Z5L4 167 aa10.62□□□□□ -0.71
PTPN6-220ENST00000543115 UBE2J2Q8N2K1 259 aa10.62□□□□□ -0.71
PTPN6-220ENST00000543115 OR52E4Q8NGH9 312 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms