RNA–Protein interactions for RNA: ENST00000542552.1

ECHDC2-223, Transcript of enoyl-CoA hydratase domain containing 2, humanhuman

TSL 1 (best)

Gene ECHDC2, Length 981 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC2-223ENST00000542552 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.78□□□□□ -0.2
ECHDC2-223ENST00000542552 OSGIN1Q9UJX0 560 aa13.78□□□□□ -0.2
ECHDC2-223ENST00000542552 SPIN1Q9Y657 262 aaPredicted RBP13.78□□□□□ -0.2
ECHDC2-223ENST00000542552 TMED7-TICAM2A0A0A6YYA0 188 aa13.77□□□□□ -0.21
ECHDC2-223ENST00000542552 A6NNC1 897 aa13.77□□□□□ -0.21
ECHDC2-223ENST00000542552 FBP2O00757 339 aa13.77□□□□□ -0.21
ECHDC2-223ENST00000542552 ANGPT2O15123 496 aa13.77□□□□□ -0.21
ECHDC2-223ENST00000542552 SMAD9O15198 467 aaKnown RBP13.77□□□□□ -0.21
ECHDC2-223ENST00000542552 ZNF208O43345 1280 aa13.77□□□□□ -0.21
ECHDC2-223ENST00000542552 GKN3PP0CG01 181 aa13.77□□□□□ -0.21
ECHDC2-223ENST00000542552 UQCRBP14927 111 aa13.77□□□□□ -0.21
ECHDC2-223ENST00000542552 UGT2B10P36537 528 aa13.77□□□□□ -0.21
ECHDC2-223ENST00000542552 CPOXP36551 454 aa13.77□□□□□ -0.21
ECHDC2-223ENST00000542552 DIO1P49895 249 aa13.77□□□□□ -0.21
ECHDC2-223ENST00000542552 POLR2HP52434 150 aaKnown RBP13.77□□□□□ -0.21
ECHDC2-223ENST00000542552 MAP2K6P52564 334 aa13.77□□□□□ -0.21
ECHDC2-223ENST00000542552 MAP1AP78559 2803 aaPredicted RBP13.77□□□□□ -0.21
ECHDC2-223ENST00000542552 CDK6Q00534 326 aa13.77□□□□□ -0.21
ECHDC2-223ENST00000542552 ZNF311Q5JNZ3 666 aa13.77□□□□□ -0.21
ECHDC2-223ENST00000542552 REEP3Q6NUK4 255 aa13.77□□□□□ -0.21
ECHDC2-223ENST00000542552 NFKBIDQ8NI38 313 aa13.77□□□□□ -0.21
ECHDC2-223ENST00000542552 SLC35B4Q969S0 331 aa13.77□□□□□ -0.21
ECHDC2-223ENST00000542552 REXO5Q96IC2 774 aaKnown RBP13.77□□□□□ -0.21
ECHDC2-223ENST00000542552 ARL5BQ96KC2 179 aa13.77□□□□□ -0.21
ECHDC2-223ENST00000542552 CGREF1Q99674 301 aa13.77□□□□□ -0.21
ECHDC2-223ENST00000542552 BCO1Q9HAY6 547 aa13.77□□□□□ -0.21
ECHDC2-223ENST00000542552 SAR1AQ9NR31 198 aa13.77□□□□□ -0.21
ECHDC2-223ENST00000542552 RASSF1Q9NS23 344 aa13.77□□□□□ -0.21
ECHDC2-223ENST00000542552 KLHL13Q9P2N7 655 aa13.77□□□□□ -0.21
ECHDC2-223ENST00000542552 TMED7Q9Y3B3 224 aa13.77□□□□□ -0.21
ECHDC2-223ENST00000542552 HDGFL3Q9Y3E1 203 aa13.77□□□□□ -0.21
ECHDC2-223ENST00000542552 ABCA4P78363 2273 aa13.76□□□□□ -0.21
ECHDC2-223ENST00000542552 IGHV3-15A0A0B4J1V0 119 aa13.76□□□□□ -0.21
ECHDC2-223ENST00000542552 SH3D21A4FU49 640 aa13.76□□□□□ -0.21
ECHDC2-223ENST00000542552 C5orf58C9J3I9 102 aa13.76□□□□□ -0.21
ECHDC2-223ENST00000542552 SULT2B1O00204 365 aa13.76□□□□□ -0.21
ECHDC2-223ENST00000542552 DNPH1O43598 174 aa13.76□□□□□ -0.21
ECHDC2-223ENST00000542552 CYTIPO60759 359 aa13.76□□□□□ -0.21
ECHDC2-223ENST00000542552 PMS2P2O95744 297 aa13.76□□□□□ -0.21
ECHDC2-223ENST00000542552 YES1P07947 543 aa13.76□□□□□ -0.21
ECHDC2-223ENST00000542552 PRG2P13727 222 aa13.76□□□□□ -0.21
ECHDC2-223ENST00000542552 KLK2P20151 261 aa13.76□□□□□ -0.21
ECHDC2-223ENST00000542552 TACR3P29371 465 aa13.76□□□□□ -0.21
ECHDC2-223ENST00000542552 PRKAR1BP31321 381 aa13.76□□□□□ -0.21
ECHDC2-223ENST00000542552 CCKARP32238 428 aa13.76□□□□□ -0.21
ECHDC2-223ENST00000542552 CSNK2A1P68400 391 aaPredicted RBP13.76□□□□□ -0.21
ECHDC2-223ENST00000542552 KLF10Q13118 480 aa13.76□□□□□ -0.21
ECHDC2-223ENST00000542552 ZNF550Q7Z398 422 aa13.76□□□□□ -0.21
ECHDC2-223ENST00000542552 MTDHQ86UE4 582 aaKnown RBP13.76□□□□□ -0.21
ECHDC2-223ENST00000542552 PTOV1Q86YD1 416 aa13.76□□□□□ -0.21
ECHDC2-223ENST00000542552 TUSC5Q8IXB3 177 aa13.76□□□□□ -0.21
ECHDC2-223ENST00000542552 PSD2Q9BQI7 771 aa13.76□□□□□ -0.21
ECHDC2-223ENST00000542552 TACO1Q9BSH4 297 aaKnown RBP13.76□□□□□ -0.21
ECHDC2-223ENST00000542552 OR11A1Q9GZK7 315 aa13.76□□□□□ -0.21
ECHDC2-223ENST00000542552 ARMC7Q9H6L4 198 aa13.76□□□□□ -0.21
ECHDC2-223ENST00000542552 KLHL14Q9P2G3 628 aa13.76□□□□□ -0.21
ECHDC2-223ENST00000542552 TRAPPC4Q9Y296 219 aa13.76□□□□□ -0.21
ECHDC2-223ENST00000542552 TESMINQ9Y4I5 508 aa13.76□□□□□ -0.21
ECHDC2-223ENST00000542552 FREM1Q5H8C1 2179 aa13.76□□□□□ -0.21
ECHDC2-223ENST00000542552 TMEM72A0PK05 275 aa13.75□□□□□ -0.21
ECHDC2-223ENST00000542552 C16orf97H3BN30 126 aa13.75□□□□□ -0.21
ECHDC2-223ENST00000542552 GOSR1O95249 250 aa13.75□□□□□ -0.21
ECHDC2-223ENST00000542552 FESP07332 822 aa13.75□□□□□ -0.21
ECHDC2-223ENST00000542552 TFPIP10646 304 aa13.75□□□□□ -0.21
ECHDC2-223ENST00000542552 POU2F1P14859 743 aa13.75□□□□□ -0.21
ECHDC2-223ENST00000542552 SLC6A2P23975 617 aa13.75□□□□□ -0.21
ECHDC2-223ENST00000542552 H3F3AP84243 136 aa13.75□□□□□ -0.21
ECHDC2-223ENST00000542552 SCARB2Q14108 478 aa13.75□□□□□ -0.21
ECHDC2-223ENST00000542552 SELPLGQ14242 412 aa13.75□□□□□ -0.21
ECHDC2-223ENST00000542552 COQ5Q5HYK3 327 aa13.75□□□□□ -0.21
ECHDC2-223ENST00000542552 WBP2NLQ6ICG8 309 aa13.75□□□□□ -0.21
ECHDC2-223ENST00000542552 DHRS4L2Q6PKH6 230 aa13.75□□□□□ -0.21
ECHDC2-223ENST00000542552 NUFIP2Q7Z417 695 aaKnown RBP13.75□□□□□ -0.21
ECHDC2-223ENST00000542552 NET1Q7Z628 596 aaPredicted RBP13.75□□□□□ -0.21
ECHDC2-223ENST00000542552 SERPINA11Q86U17 422 aa13.75□□□□□ -0.21
ECHDC2-223ENST00000542552 TMEM200AQ86VY9 491 aa13.75□□□□□ -0.21
ECHDC2-223ENST00000542552 C10orf82Q8WW14 230 aa13.75□□□□□ -0.21
ECHDC2-223ENST00000542552 GPATCH1Q9BRR8 931 aaKnown RBP13.75□□□□□ -0.21
ECHDC2-223ENST00000542552 KAT8Q9H7Z6 458 aaKnown RBP13.75□□□□□ -0.21
ECHDC2-223ENST00000542552 CACYBPQ9HB71 228 aaKnown RBP13.75□□□□□ -0.21
ECHDC2-223ENST00000542552 KLHL9Q9P2J3 617 aa13.75□□□□□ -0.21
ECHDC2-223ENST00000542552 NDRG3Q9UGV2 375 aa13.75□□□□□ -0.21
ECHDC2-223ENST00000542552 IGKV3D-15A0A087WSY6 115 aa13.74□□□□□ -0.21
ECHDC2-223ENST00000542552 ZNF724A8MTY0 619 aa13.74□□□□□ -0.21
ECHDC2-223ENST00000542552 CCNA2P20248 432 aa13.74□□□□□ -0.21
ECHDC2-223ENST00000542552 ADSLP30566 484 aaPredicted RBP13.74□□□□□ -0.21
ECHDC2-223ENST00000542552 PCBP3P57721 371 aaKnown RBP13.74□□□□□ -0.21
ECHDC2-223ENST00000542552 MTPNP58546 118 aa13.74□□□□□ -0.21
ECHDC2-223ENST00000542552 RBBP4Q09028 425 aa13.74□□□□□ -0.21
ECHDC2-223ENST00000542552 RASGEF1BQ0VAM2 473 aa13.74□□□□□ -0.21
ECHDC2-223ENST00000542552 SF3A3Q12874 501 aaKnown RBP eCLIP13.74□□□□□ -0.21
ECHDC2-223ENST00000542552 NFYCQ13952 458 aa13.74□□□□□ -0.21
ECHDC2-223ENST00000542552 PDK3Q15120 406 aa13.74□□□□□ -0.21
ECHDC2-223ENST00000542552 TMEM201Q5SNT2 666 aa13.74□□□□□ -0.21
ECHDC2-223ENST00000542552 ABLIM2Q6H8Q1 611 aa13.74□□□□□ -0.21
ECHDC2-223ENST00000542552 TFAP2EQ6VUC0 442 aa13.74□□□□□ -0.21
ECHDC2-223ENST00000542552 STAC2Q6ZMT1 411 aa13.74□□□□□ -0.21
ECHDC2-223ENST00000542552 BEND4Q6ZU67 534 aa13.74□□□□□ -0.21
ECHDC2-223ENST00000542552 CDH24Q86UP0 819 aa13.74□□□□□ -0.21
ECHDC2-223ENST00000542552 COMTD1Q86VU5 262 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms