RNA–Protein interactions for RNA: ENST00000541982.5

CD4-210, Transcript of CD4 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD4, Length 1,187 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD4-210ENST00000541982 CBFBQ13951 182 aa13.67□□□□□ -0.22
CD4-210ENST00000541982 GGTLC2Q14390 218 aa13.67□□□□□ -0.22
CD4-210ENST00000541982 C6orf120Q7Z4R8 191 aa13.67□□□□□ -0.22
CD4-210ENST00000541982 NUDCD3Q8IVD9 361 aa13.67□□□□□ -0.22
CD4-210ENST00000541982 ZNF614Q8N883 585 aa13.67□□□□□ -0.22
CD4-210ENST00000541982 ATP6V1C2Q8NEY4 427 aa13.67□□□□□ -0.22
CD4-210ENST00000541982 OR5D16Q8NGK9 328 aa13.67□□□□□ -0.22
CD4-210ENST00000541982 OR5AK3PQ8NH89 298 aa13.67□□□□□ -0.22
CD4-210ENST00000541982 AENQ8WTP8 325 aaKnown RBP13.67□□□□□ -0.22
CD4-210ENST00000541982 MSI2Q96DH6 328 aaKnown RBP13.67□□□□□ -0.22
CD4-210ENST00000541982 PIMREGQ9BSJ6 248 aa13.67□□□□□ -0.22
CD4-210ENST00000541982 LAT2Q9GZY6 243 aa13.67□□□□□ -0.22
CD4-210ENST00000541982 ING1Q9UK53 422 aaPredicted RBP13.67□□□□□ -0.22
CD4-210ENST00000541982 FKBP7Q9Y680 259 aa13.67□□□□□ -0.22
CD4-210ENST00000541982 IGHV3-15A0A0B4J1V0 119 aa13.66□□□□□ -0.22
CD4-210ENST00000541982 SLC35F4A4IF30 521 aa13.66□□□□□ -0.22
CD4-210ENST00000541982 SERINC4A6NH21 518 aa13.66□□□□□ -0.22
CD4-210ENST00000541982 ESPNB1AK53 854 aa13.66□□□□□ -0.22
CD4-210ENST00000541982 RNASET2O00584 256 aaKnown RBP13.66□□□□□ -0.22
CD4-210ENST00000541982 STX11O75558 287 aa13.66□□□□□ -0.22
CD4-210ENST00000541982 GUSBP08236 651 aa13.66□□□□□ -0.22
CD4-210ENST00000541982 SOAT1P35610 550 aa13.66□□□□□ -0.22
CD4-210ENST00000541982 ZNF83P51522 516 aa13.66□□□□□ -0.22
CD4-210ENST00000541982 QPRTQ15274 297 aa13.66□□□□□ -0.22
CD4-210ENST00000541982 ZNF141Q15928 474 aa13.66□□□□□ -0.22
CD4-210ENST00000541982 ARHGAP11BQ3KRB8 267 aa13.66□□□□□ -0.22
CD4-210ENST00000541982 PDZK1Q5T2W1 519 aa13.66□□□□□ -0.22
CD4-210ENST00000541982 OR8J2Q8NGG1 315 aa13.66□□□□□ -0.22
CD4-210ENST00000541982 OR52N5Q8NH56 324 aa13.66□□□□□ -0.22
CD4-210ENST00000541982 MIPOL1Q8TD10 442 aa13.66□□□□□ -0.22
CD4-210ENST00000541982 OIT3Q8WWZ8 545 aa13.66□□□□□ -0.22
CD4-210ENST00000541982 ST8SIA1Q92185 356 aa13.66□□□□□ -0.22
CD4-210ENST00000541982 FKRPQ9H9S5 495 aa13.66□□□□□ -0.22
CD4-210ENST00000541982 EMC3Q9P0I2 261 aa13.66□□□□□ -0.22
CD4-210ENST00000541982 SLC25A15Q9Y619 301 aa13.66□□□□□ -0.22
CD4-210ENST00000541982 ARFGEF3Q5TH69 2177 aa13.65□□□□□ -0.22
CD4-210ENST00000541982 CCT8L1PA6NM43 557 aa13.65□□□□□ -0.22
CD4-210ENST00000541982 VWC2LB2RUY7 222 aa13.65□□□□□ -0.22
CD4-210ENST00000541982 C9JVG2 144 aa13.65□□□□□ -0.22
CD4-210ENST00000541982 M0R1B8 84 aa13.65□□□□□ -0.22
CD4-210ENST00000541982 SPRY1O43609 319 aaPredicted RBP13.65□□□□□ -0.22
CD4-210ENST00000541982 RAD51DO75771 328 aa13.65□□□□□ -0.22
CD4-210ENST00000541982 SNUPNO95149 360 aaKnown RBP13.65□□□□□ -0.22
CD4-210ENST00000541982 APOBEC3AP31941 199 aaPredicted RBP13.65□□□□□ -0.22
CD4-210ENST00000541982 NR4A2P43354 598 aa13.65□□□□□ -0.22
CD4-210ENST00000541982 RNF144AP50876 292 aaPredicted RBP13.65□□□□□ -0.22
CD4-210ENST00000541982 CHRNEQ04844 493 aa13.65□□□□□ -0.22
CD4-210ENST00000541982 SPOCK1Q08629 439 aa13.65□□□□□ -0.22
CD4-210ENST00000541982 GPR68Q15743 365 aa13.65□□□□□ -0.22
CD4-210ENST00000541982 PGS1Q32NB8 556 aa13.65□□□□□ -0.22
CD4-210ENST00000541982 NDUFAF6Q330K2 333 aa13.65□□□□□ -0.22
CD4-210ENST00000541982 FBXW9Q5XUX1 488 aa13.65□□□□□ -0.22
CD4-210ENST00000541982 AP1ARQ63HQ0 302 aa13.65□□□□□ -0.22
CD4-210ENST00000541982 OR4F3Q6IEY1 312 aa13.65□□□□□ -0.22
CD4-210ENST00000541982 OR7E24Q6IFN5 339 aa13.65□□□□□ -0.22
CD4-210ENST00000541982 C3orf33Q6P1S2 294 aa13.65□□□□□ -0.22
CD4-210ENST00000541982 WDR93Q6P2C0 686 aa13.65□□□□□ -0.22
CD4-210ENST00000541982 C12orf54Q6X4T0 127 aa13.65□□□□□ -0.22
CD4-210ENST00000541982 B3GLCTQ6Y288 498 aa13.65□□□□□ -0.22
CD4-210ENST00000541982 MEX3DQ86XN8 651 aaKnown RBP13.65□□□□□ -0.22
CD4-210ENST00000541982 KIRREL3Q8IZU9 778 aa13.65□□□□□ -0.22
CD4-210ENST00000541982 UBE2J2Q8N2K1 259 aa13.65□□□□□ -0.22
CD4-210ENST00000541982 TMCO5AQ8N6Q1 288 aa13.65□□□□□ -0.22
CD4-210ENST00000541982 RFWD2Q8NHY2 731 aa13.65□□□□□ -0.22
CD4-210ENST00000541982 TMEM234Q8WY98 164 aa13.65□□□□□ -0.22
CD4-210ENST00000541982 ZNF775Q96BV0 537 aaPredicted RBP13.65□□□□□ -0.22
CD4-210ENST00000541982 ZNF524Q96C55 264 aa13.65□□□□□ -0.22
CD4-210ENST00000541982 SLC35G5Q96KT7 338 aa13.65□□□□□ -0.22
CD4-210ENST00000541982 ZNF300Q96RE9 604 aaPredicted RBP13.65□□□□□ -0.22
CD4-210ENST00000541982 PLA2G12AQ9BZM1 189 aa13.65□□□□□ -0.22
CD4-210ENST00000541982 ZNF350Q9GZX5 532 aa13.65□□□□□ -0.22
CD4-210ENST00000541982 SERHL2Q9H4I8 314 aa13.65□□□□□ -0.22
CD4-210ENST00000541982 MYOZ1Q9NP98 299 aaPredicted RBP13.65□□□□□ -0.22
CD4-210ENST00000541982 EXD2Q9NVH0 621 aa13.65□□□□□ -0.22
CD4-210ENST00000541982 KCNE5Q9UJ90 142 aa13.65□□□□□ -0.22
CD4-210ENST00000541982 PCDHGB4Q9UN71 923 aa13.65□□□□□ -0.22
CD4-210ENST00000541982 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.65□□□□□ -0.22
CD4-210ENST00000541982 ATP23Q9Y6H3 246 aa13.65□□□□□ -0.22
CD4-210ENST00000541982 RNF103-CHMP3A0A140T963 221 aa13.64□□□□□ -0.23
CD4-210ENST00000541982 A0A1W2PNR3 127 aa13.64□□□□□ -0.23
CD4-210ENST00000541982 SMAD9O15198 467 aaKnown RBP13.64□□□□□ -0.23
CD4-210ENST00000541982 BIRC5O15392 142 aa13.64□□□□□ -0.23
CD4-210ENST00000541982 ITM2AO43736 263 aa13.64□□□□□ -0.23
CD4-210ENST00000541982 SCN2BO60939 215 aa13.64□□□□□ -0.23
CD4-210ENST00000541982 UGT2B17O75795 530 aa13.64□□□□□ -0.23
CD4-210ENST00000541982 AGR2O95994 175 aa13.64□□□□□ -0.23
CD4-210ENST00000541982 TGFAP01135 160 aa13.64□□□□□ -0.23
CD4-210ENST00000541982 SERPINE1P05121 402 aa13.64□□□□□ -0.23
CD4-210ENST00000541982 MYZAPP0CAP1 466 aa13.64□□□□□ -0.23
CD4-210ENST00000541982 CCR4P51679 360 aa13.64□□□□□ -0.23
CD4-210ENST00000541982 ABCE1P61221 599 aaKnown RBP13.64□□□□□ -0.23
CD4-210ENST00000541982 RPS26P62854 115 aaKnown RBP13.64□□□□□ -0.23
CD4-210ENST00000541982 SKP2Q13309 424 aa13.64□□□□□ -0.23
CD4-210ENST00000541982 TIGD2Q4W5G0 525 aa13.64□□□□□ -0.23
CD4-210ENST00000541982 LRRC34Q8IZ02 419 aa13.64□□□□□ -0.23
CD4-210ENST00000541982 CLECL1Q8IZS7 167 aa13.64□□□□□ -0.23
CD4-210ENST00000541982 MREGQ8N565 214 aa13.64□□□□□ -0.23
CD4-210ENST00000541982 ZNF540Q8NDQ6 660 aa13.64□□□□□ -0.23
CD4-210ENST00000541982 ZNF75CPQ92670 426 aaPredicted RBP13.64□□□□□ -0.23
CD4-210ENST00000541982 THUMPD3Q9BV44 507 aaKnown RBP13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms