RNA–Protein interactions for RNA: ENST00000540998.5

CDC42SE1-207, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CDC42SE1, Length 3,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-207ENST00000540998 SULT1A4P0DMN0 295 aa9.56□□□□□ -0.88
CDC42SE1-207ENST00000540998 NAT1P18440 290 aa9.56□□□□□ -0.88
CDC42SE1-207ENST00000540998 CXCL2P19875 107 aa9.56□□□□□ -0.88
CDC42SE1-207ENST00000540998 F8A1P23610 371 aa9.56□□□□□ -0.88
CDC42SE1-207ENST00000540998 HOXD10P28358 340 aa9.56□□□□□ -0.88
CDC42SE1-207ENST00000540998 PRKAR1BP31321 381 aa9.56□□□□□ -0.88
CDC42SE1-207ENST00000540998 DCTDP32321 178 aa9.56□□□□□ -0.88
CDC42SE1-207ENST00000540998 KIAA1024LP59773 190 aa9.56□□□□□ -0.88
CDC42SE1-207ENST00000540998 EEF1A1P68104 462 aaKnown RBP9.56□□□□□ -0.88
CDC42SE1-207ENST00000540998 KLF9Q13886 244 aaPredicted RBP9.56□□□□□ -0.88
CDC42SE1-207ENST00000540998 TCTE1Q5JU00 501 aa9.56□□□□□ -0.88
CDC42SE1-207ENST00000540998 OR5M10Q6IEU7 315 aa9.56□□□□□ -0.88
CDC42SE1-207ENST00000540998 IDO2Q6ZQW0 420 aa9.56□□□□□ -0.88
CDC42SE1-207ENST00000540998 OR4N2Q8NGD1 307 aa9.56□□□□□ -0.88
CDC42SE1-207ENST00000540998 TTC9Q92623 222 aa9.56□□□□□ -0.88
CDC42SE1-207ENST00000540998 SMARCD2Q92925 531 aa9.56□□□□□ -0.88
CDC42SE1-207ENST00000540998 NXPE2Q96DL1 559 aa9.56□□□□□ -0.88
CDC42SE1-207ENST00000540998 ELMOD3Q96FG2 381 aa9.56□□□□□ -0.88
CDC42SE1-207ENST00000540998 C10orf90Q96M02 699 aa9.56□□□□□ -0.88
CDC42SE1-207ENST00000540998 TSSK2Q96PF2 358 aa9.56□□□□□ -0.88
CDC42SE1-207ENST00000540998 OR1F2PQ96R84 312 aa9.56□□□□□ -0.88
CDC42SE1-207ENST00000540998 GAL3ST1Q99999 423 aa9.56□□□□□ -0.88
CDC42SE1-207ENST00000540998 RANBP3Q9H6Z4 567 aaPredicted RBP9.56□□□□□ -0.88
CDC42SE1-207ENST00000540998 WDR26Q9H7D7 661 aa9.56□□□□□ -0.88
CDC42SE1-207ENST00000540998 NOX4Q9NPH5 578 aa9.56□□□□□ -0.88
CDC42SE1-207ENST00000540998 ST6GALNAC2Q9UJ37 374 aa9.56□□□□□ -0.88
CDC42SE1-207ENST00000540998 ADAM29Q9UKF5 820 aa9.56□□□□□ -0.88
CDC42SE1-207ENST00000540998 SIGLEC7Q9Y286 467 aa9.56□□□□□ -0.88
CDC42SE1-207ENST00000540998 MEIKINA0A087WXM9 373 aa9.56□□□□□ -0.88
CDC42SE1-207ENST00000540998 CACNB4O00305 520 aaPredicted RBP9.56□□□□□ -0.88
CDC42SE1-207ENST00000540998 PVRP15151 417 aa9.56□□□□□ -0.88
CDC42SE1-207ENST00000540998 SOX2P48431 317 aa9.56□□□□□ -0.88
CDC42SE1-207ENST00000540998 RUNX2Q13950 521 aa9.56□□□□□ -0.88
CDC42SE1-207ENST00000540998 ARHGAP19Q14CB8 494 aa9.56□□□□□ -0.88
CDC42SE1-207ENST00000540998 C2orf68Q2NKX9 166 aa9.56□□□□□ -0.88
CDC42SE1-207ENST00000540998 GAB4Q2WGN9 574 aa9.56□□□□□ -0.88
CDC42SE1-207ENST00000540998 CD276Q5ZPR3 534 aa9.56□□□□□ -0.88
CDC42SE1-207ENST00000540998 MTSS1LQ765P7 747 aa9.56□□□□□ -0.88
CDC42SE1-207ENST00000540998 FCRLAQ7L513 359 aa9.56□□□□□ -0.88
CDC42SE1-207ENST00000540998 PXKQ7Z7A4 578 aa9.56□□□□□ -0.88
CDC42SE1-207ENST00000540998 LSMEM1Q8N8F7 131 aa9.56□□□□□ -0.88
CDC42SE1-207ENST00000540998 OR6K6Q8NGW6 343 aa9.56□□□□□ -0.88
CDC42SE1-207ENST00000540998 DMRTA2Q96SC8 542 aa9.56□□□□□ -0.88
CDC42SE1-207ENST00000540998 CLEC4MQ9H2X3 399 aaPredicted RBP9.56□□□□□ -0.88
CDC42SE1-207ENST00000540998 PRSS16Q9NQE7 514 aa9.56□□□□□ -0.88
CDC42SE1-207ENST00000540998 DEC1Q9P2X7 70 aa9.56□□□□□ -0.88
CDC42SE1-207ENST00000540998 ZNF69Q9UC07 566 aa9.56□□□□□ -0.88
CDC42SE1-207ENST00000540998 M0R233 179 aa9.55□□□□□ -0.88
CDC42SE1-207ENST00000540998 SLC9A3R1O14745 358 aaPredicted RBP9.55□□□□□ -0.88
CDC42SE1-207ENST00000540998 PIN1P1O15428 100 aa9.55□□□□□ -0.88
CDC42SE1-207ENST00000540998 SLC31A1O15431 190 aa9.55□□□□□ -0.88
CDC42SE1-207ENST00000540998 LYPD3O95274 346 aa9.55□□□□□ -0.88
CDC42SE1-207ENST00000540998 CT62P0C5K7 136 aa9.55□□□□□ -0.88
CDC42SE1-207ENST00000540998 LAMP2P13473 410 aa9.55□□□□□ -0.88
CDC42SE1-207ENST00000540998 HIST1H1CP16403 213 aaKnown RBP9.55□□□□□ -0.88
CDC42SE1-207ENST00000540998 NUDT1P36639 197 aa9.55□□□□□ -0.88
CDC42SE1-207ENST00000540998 RPS11P62280 158 aaKnown RBP eCLIP9.55□□□□□ -0.88
CDC42SE1-207ENST00000540998 FAM53BQ14153 422 aa9.55□□□□□ -0.88
CDC42SE1-207ENST00000540998 TMEM31Q5JXX7 168 aa9.55□□□□□ -0.88
CDC42SE1-207ENST00000540998 DMKNQ6E0U4 476 aaPredicted RBP9.55□□□□□ -0.88
CDC42SE1-207ENST00000540998 APOOLQ6UXV4 268 aa9.55□□□□□ -0.88
CDC42SE1-207ENST00000540998 GID4Q8IVV7 300 aa9.55□□□□□ -0.88
CDC42SE1-207ENST00000540998 LNX2Q8N448 690 aa9.55□□□□□ -0.88
CDC42SE1-207ENST00000540998 FAM98AQ8NCA5 519 aaKnown RBP9.55□□□□□ -0.88
CDC42SE1-207ENST00000540998 COQ8AQ8NI60 647 aa9.55□□□□□ -0.88
CDC42SE1-207ENST00000540998 SFXN5Q8TD22 340 aa9.55□□□□□ -0.88
CDC42SE1-207ENST00000540998 ERMAPQ96PL5 475 aaPredicted RBP9.55□□□□□ -0.88
CDC42SE1-207ENST00000540998 OR2M2Q96R28 347 aa9.55□□□□□ -0.88
CDC42SE1-207ENST00000540998 ZNF436Q9C0F3 470 aaPredicted RBP9.55□□□□□ -0.88
CDC42SE1-207ENST00000540998 CMC2Q9NRP2 79 aa9.55□□□□□ -0.88
CDC42SE1-207ENST00000540998 C2orf42Q9NWW7 574 aa9.55□□□□□ -0.88
CDC42SE1-207ENST00000540998 FLRT3Q9NZU0 649 aa9.55□□□□□ -0.88
CDC42SE1-207ENST00000540998 HCN3Q9P1Z3 774 aa9.55□□□□□ -0.88
CDC42SE1-207ENST00000540998 MGAT4CQ9UBM8 478 aa9.55□□□□□ -0.88
CDC42SE1-207ENST00000540998 RPS6KB2Q9UBS0 482 aa9.55□□□□□ -0.88
CDC42SE1-207ENST00000540998 TRBV2A0A0J9YWF9 115 aa9.55□□□□□ -0.88
CDC42SE1-207ENST00000540998 EDDM13A0A1B0GTR0 161 aa9.55□□□□□ -0.88
CDC42SE1-207ENST00000540998 A0A1W2PPL8 197 aa9.55□□□□□ -0.88
CDC42SE1-207ENST00000540998 TRAPPC13A5PLN9 417 aa9.55□□□□□ -0.88
CDC42SE1-207ENST00000540998 GRXCR1A8MXD5 290 aa9.55□□□□□ -0.88
CDC42SE1-207ENST00000540998 CHURC1-FNTBB4DL54 471 aa9.55□□□□□ -0.88
CDC42SE1-207ENST00000540998 H0Y8X5 98 aa9.55□□□□□ -0.88
CDC42SE1-207ENST00000540998 FLRT2O43155 660 aa9.55□□□□□ -0.88
CDC42SE1-207ENST00000540998 GMFGO60234 142 aa9.55□□□□□ -0.88
CDC42SE1-207ENST00000540998 SC5DO75845 299 aa9.55□□□□□ -0.88
CDC42SE1-207ENST00000540998 RPN2P04844 631 aa9.55□□□□□ -0.88
CDC42SE1-207ENST00000540998 CTSBP07858 339 aa9.55□□□□□ -0.88
CDC42SE1-207ENST00000540998 CFL1P23528 166 aaKnown RBP9.55□□□□□ -0.88
CDC42SE1-207ENST00000540998 PTGS2P35354 604 aa9.55□□□□□ -0.88
CDC42SE1-207ENST00000540998 EMDP50402 254 aa9.55□□□□□ -0.88
CDC42SE1-207ENST00000540998 ARHGDIBP52566 201 aa9.55□□□□□ -0.88
CDC42SE1-207ENST00000540998 HTRA3P83110 453 aa9.55□□□□□ -0.88
CDC42SE1-207ENST00000540998 ANGPT1Q15389 498 aa9.55□□□□□ -0.88
CDC42SE1-207ENST00000540998 YOD1Q5VVQ6 348 aaPredicted RBP9.55□□□□□ -0.88
CDC42SE1-207ENST00000540998 DGAT2L6Q6ZPD8 337 aa9.55□□□□□ -0.88
CDC42SE1-207ENST00000540998 LRRC25Q8N386 305 aaPredicted RBP9.55□□□□□ -0.88
CDC42SE1-207ENST00000540998 OR10G6Q8NH81 332 aa9.55□□□□□ -0.88
CDC42SE1-207ENST00000540998 BRIX1Q8TDN6 353 aaKnown RBP9.55□□□□□ -0.88
CDC42SE1-207ENST00000540998 SUSD6Q92537 303 aa9.55□□□□□ -0.88
CDC42SE1-207ENST00000540998 SFXN2Q96NB2 322 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms