RNA–Protein interactions for RNA: ENST00000540960.1

CHD4-208, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 5

Gene CHD4, Length 892 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-208ENST00000540960 FAM20BO75063 409 aa7.64□□□□□ -1.19
CHD4-208ENST00000540960 CNOT3O75175 753 aaKnown RBP7.64□□□□□ -1.19
CHD4-208ENST00000540960 CRLF1O75462 422 aa7.64□□□□□ -1.19
CHD4-208ENST00000540960 SCRG1O75711 98 aa7.64□□□□□ -1.19
CHD4-208ENST00000540960 RCBTB2O95199 551 aa7.64□□□□□ -1.19
CHD4-208ENST00000540960 IL33O95760 270 aa7.64□□□□□ -1.19
CHD4-208ENST00000540960 IGF2P01344 180 aa7.64□□□□□ -1.19
CHD4-208ENST00000540960 IGHEP01854 428 aa7.64□□□□□ -1.19
CHD4-208ENST00000540960 C1QCP02747 245 aa7.64□□□□□ -1.19
CHD4-208ENST00000540960 PNMTP11086 282 aa7.64□□□□□ -1.19
CHD4-208ENST00000540960 FOLR1P15328 257 aa7.64□□□□□ -1.19
CHD4-208ENST00000540960 NAGAP17050 411 aa7.64□□□□□ -1.19
CHD4-208ENST00000540960 S1PR1P21453 382 aa7.64□□□□□ -1.19
CHD4-208ENST00000540960 DNASE1P24855 282 aa7.64□□□□□ -1.19
CHD4-208ENST00000540960 YAP1P46937 504 aaKnown RBP7.64□□□□□ -1.19
CHD4-208ENST00000540960 EMDP50402 254 aa7.64□□□□□ -1.19
CHD4-208ENST00000540960 ST13P50502 369 aaKnown RBP7.64□□□□□ -1.19
CHD4-208ENST00000540960 TMBIM6P55061 237 aa7.64□□□□□ -1.19
CHD4-208ENST00000540960 FUT5Q11128 374 aa7.64□□□□□ -1.19
CHD4-208ENST00000540960 TMED1Q13445 227 aa7.64□□□□□ -1.19
CHD4-208ENST00000540960 PIN1Q13526 163 aaPredicted RBP7.64□□□□□ -1.19
CHD4-208ENST00000540960 EFR3AQ14156 821 aa7.64□□□□□ -1.19
CHD4-208ENST00000540960 PCOLCEQ15113 449 aa7.64□□□□□ -1.19
CHD4-208ENST00000540960 ANKDD1AQ495B1 522 aa7.64□□□□□ -1.19
CHD4-208ENST00000540960 NKAIN1Q4KMZ8 207 aa7.64□□□□□ -1.19
CHD4-208ENST00000540960 SLC27A4Q6P1M0 643 aa7.64□□□□□ -1.19
CHD4-208ENST00000540960 PODNL1Q6PEZ8 512 aa7.64□□□□□ -1.19
CHD4-208ENST00000540960 ULK3Q6PHR2 472 aa7.64□□□□□ -1.19
CHD4-208ENST00000540960 B3GNT6Q6ZMB0 384 aa7.64□□□□□ -1.19
CHD4-208ENST00000540960 C16orf47Q6ZP98 133 aaPredicted RBP7.64□□□□□ -1.19
CHD4-208ENST00000540960 RASSF6Q6ZTQ3 369 aa7.64□□□□□ -1.19
CHD4-208ENST00000540960 PTCHD4Q6ZW05 846 aa7.64□□□□□ -1.19
CHD4-208ENST00000540960 OVCH1Q7RTY7 1134 aa7.64□□□□□ -1.19
CHD4-208ENST00000540960 TSEN54Q7Z6J9 526 aaKnown RBP7.64□□□□□ -1.19
CHD4-208ENST00000540960 MISPQ8IVT2 679 aa7.64□□□□□ -1.19
CHD4-208ENST00000540960 LSMEM1Q8N8F7 131 aa7.64□□□□□ -1.19
CHD4-208ENST00000540960 ZNF540Q8NDQ6 660 aa7.64□□□□□ -1.19
CHD4-208ENST00000540960 OR4K5Q8NGD3 323 aa7.64□□□□□ -1.19
CHD4-208ENST00000540960 OR52L1Q8NGH7 329 aa7.64□□□□□ -1.19
CHD4-208ENST00000540960 FAM81AQ8TBF8 368 aa7.64□□□□□ -1.19
CHD4-208ENST00000540960 SLC7A13Q8TCU3 470 aa7.64□□□□□ -1.19
CHD4-208ENST00000540960 RORBQ92753 470 aa7.64□□□□□ -1.19
CHD4-208ENST00000540960 CLIP3Q96DZ5 547 aa7.64□□□□□ -1.19
CHD4-208ENST00000540960 SLC41A3Q96GZ6 507 aa7.64□□□□□ -1.19
CHD4-208ENST00000540960 LCORQ96JN0 433 aaPredicted RBP7.64□□□□□ -1.19
CHD4-208ENST00000540960 LRFN5Q96NI6 719 aa7.64□□□□□ -1.19
CHD4-208ENST00000540960 FUZQ9BT04 418 aa7.64□□□□□ -1.19
CHD4-208ENST00000540960 SLC19A3Q9BZV2 496 aa7.64□□□□□ -1.19
CHD4-208ENST00000540960 SLC26A1Q9H2B4 701 aa7.64□□□□□ -1.19
CHD4-208ENST00000540960 WDR54Q9H977 334 aa7.64□□□□□ -1.19
CHD4-208ENST00000540960 C12orf10Q9HB07 376 aa7.64□□□□□ -1.19
CHD4-208ENST00000540960 EXOSC3Q9NQT5 275 aaKnown RBP7.64□□□□□ -1.19
CHD4-208ENST00000540960 PTTG2Q9NZH5 202 aa7.64□□□□□ -1.19
CHD4-208ENST00000540960 RSL24D1Q9UHA3 163 aaKnown RBP7.64□□□□□ -1.19
CHD4-208ENST00000540960 GPN3Q9UHW5 284 aaPredicted RBP7.64□□□□□ -1.19
CHD4-208ENST00000540960 ERVK-19Q9WJR5 959 aa7.64□□□□□ -1.19
CHD4-208ENST00000540960 GPR55Q9Y2T6 319 aaPredicted RBP7.64□□□□□ -1.19
CHD4-208ENST00000540960 MED31Q9Y3C7 131 aa7.64□□□□□ -1.19
CHD4-208ENST00000540960 RPL36Q9Y3U8 105 aaKnown RBP7.64□□□□□ -1.19
CHD4-208ENST00000540960 NUP210LQ5VU65 1888 aa7.64□□□□□ -1.19
CHD4-208ENST00000540960 TRBV4-1A0A0J9YWV2 114 aa7.63□□□□□ -1.19
CHD4-208ENST00000540960 SERINC4A6NH21 518 aa7.63□□□□□ -1.19
CHD4-208ENST00000540960 CLCA1A8K7I4 914 aa7.63□□□□□ -1.19
CHD4-208ENST00000540960 FAM171A2A8MVW0 826 aa7.63□□□□□ -1.19
CHD4-208ENST00000540960 E9PQ18 207 aa7.63□□□□□ -1.19
CHD4-208ENST00000540960 FFAR1O14842 300 aa7.63□□□□□ -1.19
CHD4-208ENST00000540960 SMAD7O15105 426 aaKnown RBP7.63□□□□□ -1.19
CHD4-208ENST00000540960 FCMRO60667 390 aa7.63□□□□□ -1.19
CHD4-208ENST00000540960 MITFO75030 526 aaPredicted RBP7.63□□□□□ -1.19
CHD4-208ENST00000540960 CPNE3O75131 537 aaKnown RBP7.63□□□□□ -1.19
CHD4-208ENST00000540960 TRMUO75648 421 aaKnown RBP7.63□□□□□ -1.19
CHD4-208ENST00000540960 GASTP01350 101 aa7.63□□□□□ -1.19
CHD4-208ENST00000540960 HEXBP07686 556 aa7.63□□□□□ -1.19
CHD4-208ENST00000540960 PIPP12273 146 aaPredicted RBP7.63□□□□□ -1.19
CHD4-208ENST00000540960 BMP7P18075 431 aa7.63□□□□□ -1.19
CHD4-208ENST00000540960 TNFRSF1BP20333 461 aa7.63□□□□□ -1.19
CHD4-208ENST00000540960 MAOAP21397 527 aa7.63□□□□□ -1.19
CHD4-208ENST00000540960 IL12BP29460 328 aa7.63□□□□□ -1.19
CHD4-208ENST00000540960 CAPZA2P47755 286 aa7.63□□□□□ -1.19
CHD4-208ENST00000540960 IDH2P48735 452 aaKnown RBP7.63□□□□□ -1.19
CHD4-208ENST00000540960 TMED10P49755 219 aaKnown RBP7.63□□□□□ -1.19
CHD4-208ENST00000540960 MAT1AQ00266 395 aaKnown RBP7.63□□□□□ -1.19
CHD4-208ENST00000540960 PSG6Q00889 435 aa7.63□□□□□ -1.19
CHD4-208ENST00000540960 KCNAB1Q14722 419 aa7.63□□□□□ -1.19
CHD4-208ENST00000540960 EXOSC7Q15024 291 aaKnown RBP7.63□□□□□ -1.19
CHD4-208ENST00000540960 PTGES3Q15185 160 aaKnown RBP7.63□□□□□ -1.19
CHD4-208ENST00000540960 OCLNQ16625 522 aa7.63□□□□□ -1.19
CHD4-208ENST00000540960 MEP1AQ16819 746 aa7.63□□□□□ -1.19
CHD4-208ENST00000540960 KLHL22Q53GT1 634 aa7.63□□□□□ -1.19
CHD4-208ENST00000540960 ARMC4Q5T2S8 1044 aa7.63□□□□□ -1.19
CHD4-208ENST00000540960 MRPL2Q5T653 305 aaKnown RBP7.63□□□□□ -1.19
CHD4-208ENST00000540960 SLX4IPQ5VYV7 408 aa7.63□□□□□ -1.19
CHD4-208ENST00000540960 PGBD2Q6P3X8 592 aa7.63□□□□□ -1.19
CHD4-208ENST00000540960 KLHL17Q6TDP4 642 aa7.63□□□□□ -1.19
CHD4-208ENST00000540960 ZNF836Q6ZNA1 936 aa7.63□□□□□ -1.19
CHD4-208ENST00000540960 KCTD8Q6ZWB6 473 aa7.63□□□□□ -1.19
CHD4-208ENST00000540960 NUP54Q7Z3B4 507 aa7.63□□□□□ -1.19
CHD4-208ENST00000540960 VRK2Q86Y07 508 aa7.63□□□□□ -1.19
CHD4-208ENST00000540960 ZNF615Q8N8J6 731 aa7.63□□□□□ -1.19
CHD4-208ENST00000540960 TMEM52Q8NDY8 209 aa7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms